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The map label for this gene is glxA [H]

Identifier: 152970261

GI number: 152970261

Start: 1889286

End: 1890266

Strand: Direct

Name: glxA [H]

Synonym: KPN_01709

Alternate gene names: 152970261

Gene position: 1889286-1890266 (Clockwise)

Preceding gene: 152970260

Following gene: 152970262

Centisome position: 35.55

GC content: 58.0

Gene sequence:

>981_bases
ATGAAAAAGATACTTATTATTGTACCCGATGGCGGCATGCTGTTTGAATCCGCCGGTATTGCTGACATTCTGATGCAGGC
CAACCGCCTGCACCCGGAAGGTGCCCGGGAAATCTGCTACCAGGTCAAGCTAGCGACAACTCAACCGCATCAGGTTATCC
ATGGTCAGTCAGGTTTAAATCTGCTGGCCGACCATCGTCTGCATGAGATTGACCCTCGCGAGCCCCTCGATACCATCATG
ATTACCGGCAGAGGTCAAAACCCGCAGGAGGGGATGGCAGTGGTTGACTGGTTGCGCCTTGCCGCTCCCCATGCCCGCCG
CATAGTCTCCATTTGCGGCGGTGCGATGCTGCTGGCGCAAACCGGACTGCTGGACGGCAGACGGGCCACTACCCACTGGA
AGCTGCTGGAAACCATGCAGGCGGAATTCCCGCAGATCCGCGTCGAGGGCGGGCCGCTCTATATTCAGGACGAACATATC
TGGACCTCTGGCGGGGTCAGTTCCGGCTTTGATCTTACGCTGGCGCTGGTTGAAGAAGACTATGGCTTCAGCCTGGCGCG
CGATATCGCCCAGGACTTCGTCATGTATCTGCGTCGCCCGGGAGGCCAGCTGCAGTTTAGCCGCTATAACCTTCAGCAGA
CCGCCACCCAGGGCCCGATTAACGATCTGCTGGCGTGGTTGCTCGAAAACCTCACCGCCGACCTCAGCGTAGATAAGCTG
GCGGAAAAAGTCGCCATGAGTCCGCGAAATTTCACCCGCGTCTTTACCCGGGAAACCGGCGCTTCGCCAGCGCGGTACGT
CGCGGAAGCCCGCCTGGCCGCCGCGCGGCAGCGTTTGGAGCAGACTCACGAGACGCTGGATCGTATCGCCGAGCAAACGG
GATTTGGCAGCAGTATTAACCTGCGACGCTTGTTTGAGAAACAGCTTAACCTCACTCCAGGTGAATATCGTCAACGATTT
CACTGTCGCAAAATGGCGTAA

Upstream 100 bases:

>100_bases
TCCCTGAAACTGAAGGCACGTATGAAACCACTCTTTCCGAGCCTTCAGGTTTTTACATCCTTTTGTTGACTTATTCTGTA
AAAAGATTACTTTTCAGGAC

Downstream 100 bases:

>100_bases
AGTGATCCTTTTTTGTCATTTACGCCATAACCCGTCCGTCCTACTCTGACTCCAGCGATAATCGATAAGGAGTTAATTAT
GGTAAAGGTCGGTATTAACG

Product: putative helix-turn-helix, AraC type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKKILIIVPDGGMLFESAGIADILMQANRLHPEGAREICYQVKLATTQPHQVIHGQSGLNLLADHRLHEIDPREPLDTIM
ITGRGQNPQEGMAVVDWLRLAAPHARRIVSICGGAMLLAQTGLLDGRRATTHWKLLETMQAEFPQIRVEGGPLYIQDEHI
WTSGGVSSGFDLTLALVEEDYGFSLARDIAQDFVMYLRRPGGQLQFSRYNLQQTATQGPINDLLAWLLENLTADLSVDKL
AEKVAMSPRNFTRVFTRETGASPARYVAEARLAAARQRLEQTHETLDRIAEQTGFGSSINLRRLFEKQLNLTPGEYRQRF
HCRKMA

Sequences:

>Translated_326_residues
MKKILIIVPDGGMLFESAGIADILMQANRLHPEGAREICYQVKLATTQPHQVIHGQSGLNLLADHRLHEIDPREPLDTIM
ITGRGQNPQEGMAVVDWLRLAAPHARRIVSICGGAMLLAQTGLLDGRRATTHWKLLETMQAEFPQIRVEGGPLYIQDEHI
WTSGGVSSGFDLTLALVEEDYGFSLARDIAQDFVMYLRRPGGQLQFSRYNLQQTATQGPINDLLAWLLENLTADLSVDKL
AEKVAMSPRNFTRVFTRETGASPARYVAEARLAAARQRLEQTHETLDRIAEQTGFGSSINLRRLFEKQLNLTPGEYRQRF
HCRKMA
>Mature_326_residues
MKKILIIVPDGGMLFESAGIADILMQANRLHPEGAREICYQVKLATTQPHQVIHGQSGLNLLADHRLHEIDPREPLDTIM
ITGRGQNPQEGMAVVDWLRLAAPHARRIVSICGGAMLLAQTGLLDGRRATTHWKLLETMQAEFPQIRVEGGPLYIQDEHI
WTSGGVSSGFDLTLALVEEDYGFSLARDIAQDFVMYLRRPGGQLQFSRYNLQQTATQGPINDLLAWLLENLTADLSVDKL
AEKVAMSPRNFTRVFTRETGASPARYVAEARLAAARQRLEQTHETLDRIAEQTGFGSSINLRRLFEKQLNLTPGEYRQRF
HCRKMA

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=109, Percent_Identity=32.1100917431193, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI87081928, Length=98, Percent_Identity=31.6326530612245, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36580; Mature: 36580

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIIVPDGGMLFESAGIADILMQANRLHPEGAREICYQVKLATTQPHQVIHGQSGLN
CCEEEEEECCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHEEEECCCCCHHHCCCCCCCH
LLADHRLHEIDPREPLDTIMITGRGQNPQEGMAVVDWLRLAAPHARRIVSICGGAMLLAQ
HHHHCCHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHH
TGLLDGRRATTHWKLLETMQAEFPQIRVEGGPLYIQDEHIWTSGGVSSGFDLTLALVEED
HCCCCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEECCCEEECCCCCCCCCEEEEEEECC
YGFSLARDIAQDFVMYLRRPGGQLQFSRYNLQQTATQGPINDLLAWLLENLTADLSVDKL
CCHHHHHHHHHHHHHHHHCCCCCEEEEHHCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH
AEKVAMSPRNFTRVFTRETGASPARYVAEARLAAARQRLEQTHETLDRIAEQTGFGSSIN
HHHHHCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LRRLFEKQLNLTPGEYRQRFHCRKMA
HHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKKILIIVPDGGMLFESAGIADILMQANRLHPEGAREICYQVKLATTQPHQVIHGQSGLN
CCEEEEEECCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHEEEECCCCCHHHCCCCCCCH
LLADHRLHEIDPREPLDTIMITGRGQNPQEGMAVVDWLRLAAPHARRIVSICGGAMLLAQ
HHHHCCHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHH
TGLLDGRRATTHWKLLETMQAEFPQIRVEGGPLYIQDEHIWTSGGVSSGFDLTLALVEED
HCCCCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEECCCEEECCCCCCCCCEEEEEEECC
YGFSLARDIAQDFVMYLRRPGGQLQFSRYNLQQTATQGPINDLLAWLLENLTADLSVDKL
CCHHHHHHHHHHHHHHHHCCCCCEEEEHHCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH
AEKVAMSPRNFTRVFTRETGASPARYVAEARLAAARQRLEQTHETLDRIAEQTGFGSSIN
HHHHHCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LRRLFEKQLNLTPGEYRQRFHCRKMA
HHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]