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The map label for this gene is pcaC [H]

Identifier: 152970095

GI number: 152970095

Start: 1714214

End: 1714603

Strand: Direct

Name: pcaC [H]

Synonym: KPN_01543

Alternate gene names: 152970095

Gene position: 1714214-1714603 (Clockwise)

Preceding gene: 152970094

Following gene: 152970100

Centisome position: 32.25

GC content: 59.23

Gene sequence:

>390_bases
ATGGATGATAAACAGCGCTATCAGGACGGGATGGCGGTACGGCGCAAAGTATTGGGCGACGCCCACGTCGACCGTACGCT
GCAGCATCTGACGCCGTTGAATGATGAGTTTCAGGACTTTATTACCCGCTATGCCTGGGGCGAGACCTGGACGCGTCCGG
GGCTCGATCACCATACCCGCAGCATGATCACTATTGCCATGCTGATCGCTCTCAATCGCGAGGCGGAGCTGAAGATGCAT
CTGCGCGCGTCGTTTAACAACGGGGTGACCCGCGATGAGCTGAAAGAGCTGATCATGCACTCTGCGCTGTACTGCGGGCT
GCCGGCGGCCAATGCCACGATGCATCTGGCGCAGCAGGTGTTTGACGACATCGACGCCGCGCAGGGTTGA

Upstream 100 bases:

>100_bases
GCCTCCGAGGTGGTGGTTCTGGCGGCATCGCATCTGTCTAACATTGAGGCGCCGAAAAGCTTTACTTCGGCGCTGCTGAG
CTTTTTCCAGGGGGAACGCC

Downstream 100 bases:

>100_bases
ATCGTCGTCCGAGTCGGATTGCCCGGCAGTCGTTGTAGGCCGGGTACGGCGCAGCCGCCACCCGGCGAAATGGCGGGTAC
GGCGCAGATAGATTGCCCTC

Product: putative 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDDKQRYQDGMAVRRKVLGDAHVDRTLQHLTPLNDEFQDFITRYAWGETWTRPGLDHHTRSMITIAMLIALNREAELKMH
LRASFNNGVTRDELKELIMHSALYCGLPAANATMHLAQQVFDDIDAAQG

Sequences:

>Translated_129_residues
MDDKQRYQDGMAVRRKVLGDAHVDRTLQHLTPLNDEFQDFITRYAWGETWTRPGLDHHTRSMITIAMLIALNREAELKMH
LRASFNNGVTRDELKELIMHSALYCGLPAANATMHLAQQVFDDIDAAQG
>Mature_129_residues
MDDKQRYQDGMAVRRKVLGDAHVDRTLQHLTPLNDEFQDFITRYAWGETWTRPGLDHHTRSMITIAMLIALNREAELKMH
LRASFNNGVTRDELKELIMHSALYCGLPAANATMHLAQQVFDDIDAAQG

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14764; Mature: 14764

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKQRYQDGMAVRRKVLGDAHVDRTLQHLTPLNDEFQDFITRYAWGETWTRPGLDHHTR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
SMITIAMLIALNREAELKMHLRASFNNGVTRDELKELIMHSALYCGLPAANATMHLAQQV
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FDDIDAAQG
HHHHHCCCC
>Mature Secondary Structure
MDDKQRYQDGMAVRRKVLGDAHVDRTLQHLTPLNDEFQDFITRYAWGETWTRPGLDHHTR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
SMITIAMLIALNREAELKMHLRASFNNGVTRDELKELIMHSALYCGLPAANATMHLAQQV
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FDDIDAAQG
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]