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The map label for this gene is quuQ [H]

Identifier: 152969954

GI number: 152969954

Start: 1562496

End: 1563251

Strand: Direct

Name: quuQ [H]

Synonym: KPN_01401

Alternate gene names: 152969954

Gene position: 1562496-1563251 (Clockwise)

Preceding gene: 152969953

Following gene: 152969956

Centisome position: 29.4

GC content: 51.72

Gene sequence:

>756_bases
ATGATGCCCGGTGCTGTACCATGCGGGATCACCGCTGATACGTTAACGATTACCGACGTCATGGCTGCCCTGGGGCTGGC
AACATCAAAATCGGCGATAGGTATCGAACTCTACCTTGCAAAAGCGGGCGTTCTGGCGCCGGATAATATAATCGCCTTTA
TCAATGAGCTTGCTACTCAGCGCGCCAACCTGAGTAAGCCTCTTCAGGCTATGGAGGAAGAGCTGCGGGTTGAGTTCTTG
CGCATACTTGCTGGATACGTTTTCCGGGACTATTCGCTGAGCGCAGCCAGCAAGGTTACATGCAGTAGTTGCGACGGATC
CGGGTTCATTGACGCTGAGGTATTCACCAACAAAGTGACTTATCCGGATGGAAAGCCCCCGAAGTGGGCCAAGGTCACAA
AGGGGATCTCGCCGTCCGACTGGGAAGAGGTGAAAACTGTGCGTGAGCAGGTAAGGGTAATCTGCAAAGCGTGCAACGGG
AAGGGTAGCACAAAGAACGAATGCCGCTGCCGTGGCCGTGGCGAGGTTCTTGATAAGAAAAAATCTGAGCTGCAGGGGCT
TCCTGTTTTTAAGCAATGTCCTCGTTGCAGTGGACGTGGTTACCCGAGATTAAAAGATACGGAGGTATTCAAGGCGCTGG
GAGTTACAGAAACCACCTGGCGCAGAAACTTCAAATTATTCTTCGATAGGCTGGTGGAGTTCTGCCATGTTGAAGAATCC
TTCGCAGAAAAGATGCTCGAAAGAGTTACGAGATGA

Upstream 100 bases:

>100_bases
CGGTGGCTTATCGAATCCTCAGAAACCAAATCCGCATCTATAAAGCAGGGGCATAATTGTGAAACTTGAAGCGTTACCAA
AATTTTTCTCACCAAAATCG

Downstream 100 bases:

>100_bases
TTTTATAACTGGCTATTGCAAACGTGGCGGAAATTGGCTAATCTCGTTCCAACGATGGGGTATTTCGCCCACGTTAAAGA
TATTAAGACCTCGCCTCGGC

Product: putative antitermination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MMPGAVPCGITADTLTITDVMAALGLATSKSAIGIELYLAKAGVLAPDNIIAFINELATQRANLSKPLQAMEEELRVEFL
RILAGYVFRDYSLSAASKVTCSSCDGSGFIDAEVFTNKVTYPDGKPPKWAKVTKGISPSDWEEVKTVREQVRVICKACNG
KGSTKNECRCRGRGEVLDKKKSELQGLPVFKQCPRCSGRGYPRLKDTEVFKALGVTETTWRRNFKLFFDRLVEFCHVEES
FAEKMLERVTR

Sequences:

>Translated_251_residues
MMPGAVPCGITADTLTITDVMAALGLATSKSAIGIELYLAKAGVLAPDNIIAFINELATQRANLSKPLQAMEEELRVEFL
RILAGYVFRDYSLSAASKVTCSSCDGSGFIDAEVFTNKVTYPDGKPPKWAKVTKGISPSDWEEVKTVREQVRVICKACNG
KGSTKNECRCRGRGEVLDKKKSELQGLPVFKQCPRCSGRGYPRLKDTEVFKALGVTETTWRRNFKLFFDRLVEFCHVEES
FAEKMLERVTR
>Mature_251_residues
MMPGAVPCGITADTLTITDVMAALGLATSKSAIGIELYLAKAGVLAPDNIIAFINELATQRANLSKPLQAMEEELRVEFL
RILAGYVFRDYSLSAASKVTCSSCDGSGFIDAEVFTNKVTYPDGKPPKWAKVTKGISPSDWEEVKTVREQVRVICKACNG
KGSTKNECRCRGRGEVLDKKKSELQGLPVFKQCPRCSGRGYPRLKDTEVFKALGVTETTWRRNFKLFFDRLVEFCHVEES
FAEKMLERVTR

Specific function: Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage antitermination Q type 2 family [H]

Homologues:

Organism=Escherichia coli, GI87081935, Length=243, Percent_Identity=34.9794238683128, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003222
- InterPro:   IPR001305 [H]

Pfam domain/function: PF03589 Antiterm [H]

EC number: NA

Molecular weight: Translated: 27834; Mature: 27834

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPGAVPCGITADTLTITDVMAALGLATSKSAIGIELYLAKAGVLAPDNIIAFINELATQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
RANLSKPLQAMEEELRVEFLRILAGYVFRDYSLSAASKVTCSSCDGSGFIDAEVFTNKVT
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEECCCCCCCCEEHHHHHCCCC
YPDGKPPKWAKVTKGISPSDWEEVKTVREQVRVICKACNGKGSTKNECRCRGRGEVLDKK
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH
KSELQGLPVFKQCPRCSGRGYPRLKDTEVFKALGVTETTWRRNFKLFFDRLVEFCHVEES
HHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FAEKMLERVTR
HHHHHHHHHCC
>Mature Secondary Structure
MMPGAVPCGITADTLTITDVMAALGLATSKSAIGIELYLAKAGVLAPDNIIAFINELATQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
RANLSKPLQAMEEELRVEFLRILAGYVFRDYSLSAASKVTCSSCDGSGFIDAEVFTNKVT
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEECCCCCCCCEEHHHHHCCCC
YPDGKPPKWAKVTKGISPSDWEEVKTVREQVRVICKACNGKGSTKNECRCRGRGEVLDKK
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH
KSELQGLPVFKQCPRCSGRGYPRLKDTEVFKALGVTETTWRRNFKLFFDRLVEFCHVEES
HHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FAEKMLERVTR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]