BacMap

Definition	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome.
Accession	NC_009648
Length	5,315,120

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The map label for this gene is dbpA [H]

Identifier: 152969927

GI number: 152969927

Start: 1540280

End: 1541653

Strand: Direct

Name: dbpA [H]

Synonym: KPN_01374

Alternate gene names: 152969927

Gene position: 1540280-1541653 (Clockwise)

Preceding gene: 152969926

Following gene: 152969941

Centisome position: 28.98

GC content: 62.52

Gene sequence:

>1374_bases
GTGACCGCTTTTTCTACCCTGACTGTTTTACCTGCCGCCCAATTAGCCAACCTTAACGAGCTGGGTTATCTGTCGATGAC
CCCGGTTCAGGCCGCCGCCCTGCCGGCGATCCTCGCGGGGAAAGATGTGCGCGTGCAGGCAAAAACCGGCAGCGGAAAAA
CGGCCGCATTTGGGCTGGGTCTGCTGCAGCATATCGATCCGGCGCGCTTCGAGACCCAGTCGCTGGTGTTATGCCCCACC
CGCGAGCTGGCCGATCAGGTCGCCGGCGAGCTGCGCCGCCTGGCGCGCTGCCTGCCGAACATCAAGATTCTGATGCTCTG
CGGCGGGCAGCCCTTTGGCGCCCAGCGAGATTCCCTGCAACATGCCCCGCATATTATCGTCGCCACCCCGGGCCGTCTGC
TCGATCATCTGCAGAAGGGAACGGTCTCCCTTGACGCGCTGCAGACCCTGGTGATGGACGAAGCGGACCGCATGCTCGAT
ATGGGCTTCAGCGATGCCATTGATGAGGTGATCCGCTTCGCACCGGCTGACCGGCAGACGCTGCTGTTTTCTGCTACCTG
GCCGGCGGCAATCGCGGCGATCAGCGGCCGGGTGCAGCGCAATCCGCAGACCATTGAGATCAACACTGTCGACGCGCTCC
CGGCGATTGAGCAGCAGTTCTTTGAAGTTTCCCGCCACGGTAAGATTGCCCTGCTGCAGCGCCTGCTCAGCCAGCATCAG
CCCGCATCCTGTGTGGTGTTCTGCAACACCAAACGCGATTGCCAGGCGGTCTGCGATGCGCTCAACGCCGCCGGGCAGAG
CGCCTTGTCGCTGCATGGTGACCTTGAGCAGCGCGATCGCGATCAGACGCTGGTGCGCTTCGCTAACGGCAGCGTCCGGG
TTCTGGTGGCGACCGACGTCGCTGCCCGCGGTCTGGACATCAAATCCCTGGCGCTGGTGGTGAATTTCGAGCTGGCCTGG
GATCCGGAGGTGCATGTTCACCGCATCGGCCGTACCGCCCGCGCCGGTGAACAAGGGCTGGCCATCAGCTTCTGTGCGCC
GGAAGAGGCGCAGCGCGCCACTATTCTGGCCGACATGCTGCAGCTTTCCCTGAACTGGCTGCCGGCGCCGACGGGCAACA
CCATCGCGCCGCTGACAGCGGAGATGGCGACGCTGTGTATCGACGGCGGGAAAAAGGCGAAAATGCGCCCGGGAGATGTG
CTGGGAGCCCTGACCGGGGATATGGGCTTTGATGGTGCCGATATCGGCAAAATTACCGTCCACCCGGCCCACGTCTATGT
GGCGATCCGCCAGAATATGGCGCAGAAGGCGTATAAGCAGTTACAAAATGGCAAGATCAAAGGTAAATCCTGCCGCGTAC
GACTGCTGAAGTAA

Upstream 100 bases:

>100_bases
CGCCGCCTGACGAAGAGCCGATTAAATTGTCGCATCAGGCGCGGAGATCTGCGAGGATACGCGCCTGCAGATTGTCTGCC
TTTTAATACGAGAATACATT

Downstream 100 bases:

>100_bases
GGGCAGGAGAGTGCGTCTCAGGCGGCTGCCTGAGACGCGTGAGGGTTATTTCACTTCCACCACGTTCAGACGCAGCTCAT
CGAGACGGGCGTCTTCTTCT

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQHIDPARFETQSLVLCPT
RELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLD
MGFSDAIDEVIRFAPADRQTLLFSATWPAAIAAISGRVQRNPQTIEINTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQ
PASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDVAARGLDIKSLALVVNFELAW
DPEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADMLQLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDV
LGALTGDMGFDGADIGKITVHPAHVYVAIRQNMAQKAYKQLQNGKIKGKSCRVRLLK

Sequences:

>Translated_457_residues
MTAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQHIDPARFETQSLVLCPT
RELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLD
MGFSDAIDEVIRFAPADRQTLLFSATWPAAIAAISGRVQRNPQTIEINTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQ
PASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDVAARGLDIKSLALVVNFELAW
DPEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADMLQLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDV
LGALTGDMGFDGADIGKITVHPAHVYVAIRQNMAQKAYKQLQNGKIKGKSCRVRLLK
>Mature_456_residues
TAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQHIDPARFETQSLVLCPTR
ELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLDM
GFSDAIDEVIRFAPADRQTLLFSATWPAAIAAISGRVQRNPQTIEINTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQP
ASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDVAARGLDIKSLALVVNFELAWD
PEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADMLQLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDVL
GALTGDMGFDGADIGKITVHPAHVYVAIRQNMAQKAYKQLQNGKIKGKSCRVRLLK

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI31542656, Length=353, Percent_Identity=39.0934844192635, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI7661920, Length=349, Percent_Identity=34.9570200573066, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI45446747, Length=349, Percent_Identity=37.8223495702006, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI45446743, Length=349, Percent_Identity=37.8223495702006, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI41327773, Length=364, Percent_Identity=37.0879120879121, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI224593278, Length=375, Percent_Identity=37.6, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI21071032, Length=370, Percent_Identity=36.7567567567568, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI164664518, Length=377, Percent_Identity=30.2387267904509, Blast_Score=214, Evalue=9e-56,
Organism=Homo sapiens, GI262118318, Length=383, Percent_Identity=36.8146214099217, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI148613856, Length=350, Percent_Identity=35.1428571428571, Blast_Score=212, Evalue=4e-55,
Organism=Homo sapiens, GI38201710, Length=350, Percent_Identity=35.1428571428571, Blast_Score=212, Evalue=4e-55,
Organism=Homo sapiens, GI20149629, Length=330, Percent_Identity=37.2727272727273, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI50659095, Length=404, Percent_Identity=34.1584158415842, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI262231852, Length=383, Percent_Identity=36.8146214099217, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI216548263, Length=383, Percent_Identity=36.8146214099217, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI13518015, Length=383, Percent_Identity=36.8146214099217, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=35.2459016393443, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=37.6344086021505, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=37.6344086021505, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=37.6344086021505, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI222352149, Length=367, Percent_Identity=35.4223433242507, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=37.3655913978495, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=37.3655913978495, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=32.9815303430079, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=37.463976945245, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI55749865, Length=355, Percent_Identity=31.830985915493, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI4758112, Length=352, Percent_Identity=30.1136363636364, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI18375623, Length=352, Percent_Identity=30.1136363636364, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI21040371, Length=352, Percent_Identity=30.1136363636364, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI38327634, Length=362, Percent_Identity=35.0828729281768, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI13129006, Length=351, Percent_Identity=34.7578347578348, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI83700235, Length=358, Percent_Identity=34.9162011173184, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=33.1550802139037, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI13514831, Length=360, Percent_Identity=35.2777777777778, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI164419743, Length=333, Percent_Identity=35.4354354354354, Blast_Score=181, Evalue=9e-46,
Organism=Homo sapiens, GI51094101, Length=333, Percent_Identity=35.4354354354354, Blast_Score=181, Evalue=9e-46,
Organism=Homo sapiens, GI41327779, Length=365, Percent_Identity=32.6027397260274, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI256223453, Length=395, Percent_Identity=29.873417721519, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI41327776, Length=329, Percent_Identity=34.0425531914894, Blast_Score=172, Evalue=7e-43,
Organism=Homo sapiens, GI164419732, Length=370, Percent_Identity=29.4594594594595, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI6005743, Length=357, Percent_Identity=30.5322128851541, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI62241022, Length=337, Percent_Identity=31.1572700296736, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI8922886, Length=357, Percent_Identity=30.2521008403361, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI62241024, Length=345, Percent_Identity=30.1449275362319, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI17505907, Length=419, Percent_Identity=30.0715990453461, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI9506931, Length=376, Percent_Identity=30.5851063829787, Blast_Score=148, Evalue=9e-36,
Organism=Homo sapiens, GI38569503, Length=360, Percent_Identity=28.6111111111111, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI38569505, Length=360, Percent_Identity=28.6111111111111, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=29.2899408284024, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=33.1168831168831, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI256773275, Length=357, Percent_Identity=30.812324929972, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI154759257, Length=398, Percent_Identity=27.1356783919598, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI20336298, Length=197, Percent_Identity=33.502538071066, Blast_Score=104, Evalue=2e-22,
Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=86.2144420131291, Blast_Score=806, Evalue=0.0,
Organism=Escherichia coli, GI87082221, Length=371, Percent_Identity=42.0485175202156, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI1787016, Length=375, Percent_Identity=40.5333333333333, Blast_Score=244, Evalue=1e-65,
Organism=Escherichia coli, GI1790214, Length=357, Percent_Identity=36.9747899159664, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=38.5074626865672, Blast_Score=191, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI71995724, Length=349, Percent_Identity=36.1031518624642, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17507121, Length=349, Percent_Identity=36.1031518624642, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71987143, Length=357, Percent_Identity=34.1736694677871, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17555296, Length=331, Percent_Identity=40.785498489426, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI115533224, Length=352, Percent_Identity=37.7840909090909, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=38.2436260623229, Blast_Score=215, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI17510307, Length=354, Percent_Identity=38.7005649717514, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17510309, Length=354, Percent_Identity=38.7005649717514, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI71995514, Length=354, Percent_Identity=38.7005649717514, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17552114, Length=335, Percent_Identity=31.3432835820896, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI71995718, Length=400, Percent_Identity=35, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI71982858, Length=359, Percent_Identity=30.08356545961, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17510559, Length=361, Percent_Identity=35.7340720221607, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI17507945, Length=356, Percent_Identity=35.3932584269663, Blast_Score=200, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI32565321, Length=376, Percent_Identity=34.5744680851064, Blast_Score=200, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17507877, Length=391, Percent_Identity=33.7595907928389, Blast_Score=195, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI115532546, Length=332, Percent_Identity=37.3493975903614, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI115532548, Length=332, Percent_Identity=37.3493975903614, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17537549, Length=376, Percent_Identity=33.2446808510638, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=35.5555555555556, Blast_Score=191, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI17507879, Length=391, Percent_Identity=33.2480818414322, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17507881, Length=407, Percent_Identity=32.4324324324324, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI71999646, Length=357, Percent_Identity=33.6134453781513, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI71999644, Length=357, Percent_Identity=33.6134453781513, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17505370, Length=362, Percent_Identity=33.7016574585635, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17536099, Length=391, Percent_Identity=30.4347826086957, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17536101, Length=391, Percent_Identity=30.4347826086957, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17509811, Length=347, Percent_Identity=31.9884726224784, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17553716, Length=326, Percent_Identity=31.2883435582822, Blast_Score=168, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=30.4347826086957, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI193206561, Length=325, Percent_Identity=29.8461538461538, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI193208216, Length=396, Percent_Identity=33.8383838383838, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17556951, Length=387, Percent_Identity=28.9405684754522, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=31.151832460733, Blast_Score=145, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17507641, Length=402, Percent_Identity=28.6069651741293, Blast_Score=138, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=29.2105263157895, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=193, Percent_Identity=33.160621761658, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17508543, Length=386, Percent_Identity=28.7564766839378, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25148203, Length=387, Percent_Identity=25.5813953488372, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=27.7945619335347, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71997889, Length=393, Percent_Identity=27.2264631043257, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI25148205, Length=322, Percent_Identity=24.8447204968944, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=105, Percent_Identity=36.1904761904762, Blast_Score=89, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6323021, Length=372, Percent_Identity=36.5591397849462, Blast_Score=228, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6321360, Length=349, Percent_Identity=40.6876790830946, Blast_Score=225, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6324217, Length=345, Percent_Identity=37.9710144927536, Blast_Score=218, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6321856, Length=348, Percent_Identity=39.0804597701149, Blast_Score=215, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6320224, Length=360, Percent_Identity=32.5, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6320041, Length=330, Percent_Identity=33.3333333333333, Blast_Score=204, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6320119, Length=358, Percent_Identity=32.4022346368715, Blast_Score=202, Evalue=6e-53,
Organism=Saccharomyces cerevisiae, GI6323947, Length=348, Percent_Identity=35.0574712643678, Blast_Score=201, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6324778, Length=376, Percent_Identity=35.1063829787234, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6325138, Length=351, Percent_Identity=36.7521367521368, Blast_Score=196, Evalue=9e-51,
Organism=Saccharomyces cerevisiae, GI6321963, Length=349, Percent_Identity=36.676217765043, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6321111, Length=363, Percent_Identity=34.1597796143251, Blast_Score=189, Evalue=8e-49,
Organism=Saccharomyces cerevisiae, GI6322912, Length=350, Percent_Identity=33.1428571428571, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6322323, Length=350, Percent_Identity=33.1428571428571, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6324620, Length=354, Percent_Identity=32.2033898305085, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6320449, Length=375, Percent_Identity=30.9333333333333, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6322427, Length=353, Percent_Identity=31.728045325779, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6319618, Length=472, Percent_Identity=29.0254237288136, Blast_Score=172, Evalue=7e-44,
Organism=Saccharomyces cerevisiae, GI6320173, Length=394, Percent_Identity=30.7106598984772, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6319714, Length=431, Percent_Identity=29.2343387470998, Blast_Score=171, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6320400, Length=368, Percent_Identity=29.0760869565217, Blast_Score=150, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6323306, Length=401, Percent_Identity=26.9326683291771, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6321267, Length=352, Percent_Identity=29.8295454545455, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=24.7126436781609, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6321374, Length=405, Percent_Identity=21.4814814814815, Blast_Score=91, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6322876, Length=160, Percent_Identity=34.375, Blast_Score=90, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=38.4831460674157, Blast_Score=237, Evalue=1e-62,
Organism=Drosophila melanogaster, GI24642151, Length=366, Percent_Identity=36.8852459016393, Blast_Score=229, Evalue=3e-60,
Organism=Drosophila melanogaster, GI24645031, Length=363, Percent_Identity=34.9862258953168, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI17136814, Length=339, Percent_Identity=37.7581120943953, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI18857967, Length=370, Percent_Identity=34.8648648648649, Blast_Score=212, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24585582, Length=333, Percent_Identity=37.8378378378378, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24644487, Length=364, Percent_Identity=34.3406593406593, Blast_Score=207, Evalue=9e-54,
Organism=Drosophila melanogaster, GI45551833, Length=364, Percent_Identity=34.3406593406593, Blast_Score=207, Evalue=9e-54,
Organism=Drosophila melanogaster, GI24644485, Length=364, Percent_Identity=34.3406593406593, Blast_Score=207, Evalue=9e-54,
Organism=Drosophila melanogaster, GI24644483, Length=364, Percent_Identity=34.3406593406593, Blast_Score=207, Evalue=9e-54,
Organism=Drosophila melanogaster, GI281361218, Length=364, Percent_Identity=34.3406593406593, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24644481, Length=364, Percent_Identity=34.3406593406593, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24583281, Length=335, Percent_Identity=33.4328358208955, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=34.3406593406593, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24583279, Length=335, Percent_Identity=33.4328358208955, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI28574962, Length=364, Percent_Identity=35.1648351648352, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI17977678, Length=367, Percent_Identity=35.4223433242507, Blast_Score=204, Evalue=8e-53,
Organism=Drosophila melanogaster, GI21355075, Length=364, Percent_Identity=33.7912087912088, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=36.6197183098592, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI21356161, Length=350, Percent_Identity=36, Blast_Score=202, Evalue=5e-52,
Organism=Drosophila melanogaster, GI28575014, Length=341, Percent_Identity=35.7771260997067, Blast_Score=201, Evalue=6e-52,
Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=37.874659400545, Blast_Score=201, Evalue=9e-52,
Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=32.4468085106383, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24582080, Length=359, Percent_Identity=33.4261838440111, Blast_Score=194, Evalue=7e-50,
Organism=Drosophila melanogaster, GI24582078, Length=359, Percent_Identity=33.4261838440111, Blast_Score=194, Evalue=7e-50,
Organism=Drosophila melanogaster, GI17136248, Length=359, Percent_Identity=33.4261838440111, Blast_Score=194, Evalue=7e-50,
Organism=Drosophila melanogaster, GI24582075, Length=359, Percent_Identity=33.4261838440111, Blast_Score=194, Evalue=7e-50,
Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=34.0720221606648, Blast_Score=188, Evalue=8e-48,
Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=34.0720221606648, Blast_Score=188, Evalue=8e-48,
Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=30.028328611898, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=30.028328611898, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=30.028328611898, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=35.6209150326797, Blast_Score=169, Evalue=5e-42,
Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=34.5945945945946, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI17647335, Length=368, Percent_Identity=28.5326086956522, Blast_Score=158, Evalue=6e-39,
Organism=Drosophila melanogaster, GI24643725, Length=368, Percent_Identity=29.0760869565217, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI18859659, Length=439, Percent_Identity=28.4738041002278, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI28571338, Length=439, Percent_Identity=28.4738041002278, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24642822, Length=364, Percent_Identity=29.6703296703297, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI20130173, Length=454, Percent_Identity=28.4140969162996, Blast_Score=141, Evalue=7e-34,
Organism=Drosophila melanogaster, GI24668515, Length=337, Percent_Identity=29.9703264094956, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24666101, Length=385, Percent_Identity=30.3896103896104, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI19920478, Length=357, Percent_Identity=29.1316526610644, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI24640164, Length=374, Percent_Identity=22.9946524064171, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17136666, Length=223, Percent_Identity=27.3542600896861, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49200; Mature: 49068

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
CCCCHHHHHCCHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH
LLQHIDPARFETQSLVLCPTRELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQ
HHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLDMGFSDAIDEVIRFAPADRQT
CCCEEEEECCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCE
LLFSATWPAAIAAISGRVQRNPQTIEINTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQ
EEEECCCHHHHHHHHCHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
PASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDV
CCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCHHHCCCHHHEEEECCCCEEEEEEECH
AARGLDIKSLALVVNFELAWDPEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADML
HHCCCCCEEEEEEEEEEEEECCCHHHEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH
QLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDVLGALTGDMGFDGADIGKITV
HHHHCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE
HPAHVYVAIRQNMAQKAYKQLQNGKIKGKSCRVRLLK
EHHEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEECC
>Mature Secondary Structure 
TAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
CCCHHHHHCCHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH
LLQHIDPARFETQSLVLCPTRELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQ
HHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLDMGFSDAIDEVIRFAPADRQT
CCCEEEEECCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCE
LLFSATWPAAIAAISGRVQRNPQTIEINTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQ
EEEECCCHHHHHHHHCHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
PASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDV
CCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCHHHCCCHHHEEEECCCCEEEEEEECH
AARGLDIKSLALVVNFELAWDPEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADML
HHCCCCCEEEEEEEEEEEEECCCHHHEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH
QLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDVLGALTGDMGFDGADIGKITV
HHHHCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE
HPAHVYVAIRQNMAQKAYKQLQNGKIKGKSCRVRLLK
EHHEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]