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The map label for this gene is yagA [C]

Identifier: 152969891

GI number: 152969891

Start: 1502017

End: 1502493

Strand: Direct

Name: yagA [C]

Synonym: KPN_01338

Alternate gene names: 152969891

Gene position: 1502017-1502493 (Clockwise)

Preceding gene: 152969890

Following gene: 152969892

Centisome position: 28.26

GC content: 49.9

Gene sequence:

>477_bases
ATGGATTTCGTGTCGGATAACCTGTTTAACGGACGACGTTTCCGGGCGCTGACTGTAGTGGATAATTTTAGTCGGGAGTG
TGTGGCGATCCATGCCGGAAAGTCGCTGAAAGGTGAGGATGTGGTCGGTGTGATGGAAAGGTTGCGGGTGCTGGGCAAGC
GCCTGCCGGTACGTATTCAGACAGATAACGGCAGCGAGTTTATCTCGAAAAGTCTGGATAAATGGGCGTATCAGCACGGT
GTTACAATGGACTTCTCCCGCCCCGGAAAACCAACGGATAACCCGTTTATTGAATCATTGAACGGCAGTCTGCGGGATGA
ATGCCTGAACATTCACTGGTTTCTCTCGCTGGAAGATGCGCAGGACAAACTCGACAACTGGCGCAGGGAATATAATCATG
AGAGAACGCATTCATCATTAAATGACATGACTCCGGCTGAATTCATCCGAAATCTCCGGAAAGACGAAGATCTCTGA

Upstream 100 bases:

>100_bases
GGAAGGCCTCAACCTGCGCAAAAAGCGCCCCCGCAGGCATGTCAGTGCAGCACATCGTCAGCAACGTCCGGTCCTGAGCG
GAGTCGATCAGTGCTGGAGT

Downstream 100 bases:

>100_bases
TTTAGCACTGCACTGATTTTGGGCCAGGGTCAGGTTCTATGTACCTAATTCATATTATTCTTATGCACAAAAAATAATAA
ATTCGGGCTCGAGAGAAGCA

Product: putative transposase-related protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MDFVSDNLFNGRRFRALTVVDNFSRECVAIHAGKSLKGEDVVGVMERLRVLGKRLPVRIQTDNGSEFISKSLDKWAYQHG
VTMDFSRPGKPTDNPFIESLNGSLRDECLNIHWFLSLEDAQDKLDNWRREYNHERTHSSLNDMTPAEFIRNLRKDEDL

Sequences:

>Translated_158_residues
MDFVSDNLFNGRRFRALTVVDNFSRECVAIHAGKSLKGEDVVGVMERLRVLGKRLPVRIQTDNGSEFISKSLDKWAYQHG
VTMDFSRPGKPTDNPFIESLNGSLRDECLNIHWFLSLEDAQDKLDNWRREYNHERTHSSLNDMTPAEFIRNLRKDEDL
>Mature_158_residues
MDFVSDNLFNGRRFRALTVVDNFSRECVAIHAGKSLKGEDVVGVMERLRVLGKRLPVRIQTDNGSEFISKSLDKWAYQHG
VTMDFSRPGKPTDNPFIESLNGSLRDECLNIHWFLSLEDAQDKLDNWRREYNHERTHSSLNDMTPAEFIRNLRKDEDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=155, Percent_Identity=31.6129032258064, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 18357; Mature: 18357

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFVSDNLFNGRRFRALTVVDNFSRECVAIHAGKSLKGEDVVGVMERLRVLGKRLPVRIQ
CCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEE
TDNGSEFISKSLDKWAYQHGVTMDFSRPGKPTDNPFIESLNGSLRDECLNIHWFLSLEDA
CCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCHHHHHHEEEEEEEEECHH
QDKLDNWRREYNHERTHSSLNDMTPAEFIRNLRKDEDL
HHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MDFVSDNLFNGRRFRALTVVDNFSRECVAIHAGKSLKGEDVVGVMERLRVLGKRLPVRIQ
CCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEE
TDNGSEFISKSLDKWAYQHGVTMDFSRPGKPTDNPFIESLNGSLRDECLNIHWFLSLEDA
CCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCHHHHHHEEEEEEEEECHH
QDKLDNWRREYNHERTHSSLNDMTPAEFIRNLRKDEDL
HHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]