Click here to switch to the map view.

The map label for this gene is ynjF [H]

Identifier: 152969766

GI number: 152969766

Start: 1363417

End: 1364040

Strand: Direct

Name: ynjF [H]

Synonym: KPN_01212

Alternate gene names: 152969766

Gene position: 1363417-1364040 (Clockwise)

Preceding gene: 152969763

Following gene: 152969775

Centisome position: 25.65

GC content: 64.26

Gene sequence:

>624_bases
GTGCTTGATAGCCACCTGCATCCGCGCCTTAAACCCCTGCTAAACGCTGTCGCCGGCGCCCTTGACCGCCCCGGCATCTC
ACCGGACGGGCTGACGCTGGTCGGTTTTGCCATCGGCGTGCTGGCTCTGCCCTTTCTGGCGCTGGGGTGGTATGGCGCGG
CGCTGGCGGCCATTCTCCTTAACCGCCTGCTGGATGGCCTGGACGGCGCTCTGGCGCGGCGGCGCGGGCTCACGGACGCG
GGCGGCTTTCTCGATATTGCGCTGGATTTTCTCTTTTACGCCCTGGTGCCGTTCGGCTTTATTCTGGCGGATCCGCTGAA
CAATGCCCTGGCGGGCGGCTGGCTGCTGTTTGCCTTTATCGGCACCGGCAGCAGCTTTCTCGCTTTTGCCGCCCTGGCGG
CCAGGCACCAGATCGCCAATCCCGGCTACGCCCATAAATCGCTGTACTATCTCGGGGGACTGACGGAGGGGACGGAGACC
ATCCTGTTGTTTGTCCTCGGCTGCCTGTTTCCGGCGCATTTCGCCTGGCTGGCGTGGCTGTTTGGCGCGCTGTGCTGGCT
GACGACGGCGACGCGCATCTGCAGTGGCTACCAGACCTTAAAGCGGGTAACGACCACAGCGTAA

Upstream 100 bases:

>100_bases
ATCATTTTTAGCATAAGCATCAAGGTTAATAAGACGAATATGGCCTATTATCACCGCCATAGACCGTAACTGACAACCGC
CAACCCTGCTGGAGACCTTC

Downstream 100 bases:

>100_bases
ACGGGGTATCGCGCGTCGCCGACAAAGGGCGACGCGCTGAGGCGGGGCGAGTTACTGACTGCTTTCCGGGCCGCGCTCTC
CGCGGGCCACCGGATTGTGC

Product: putative cytochrome oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLDSHLHPRLKPLLNAVAGALDRPGISPDGLTLVGFAIGVLALPFLALGWYGAALAAILLNRLLDGLDGALARRRGLTDA
GGFLDIALDFLFYALVPFGFILADPLNNALAGGWLLFAFIGTGSSFLAFAALAARHQIANPGYAHKSLYYLGGLTEGTET
ILLFVLGCLFPAHFAWLAWLFGALCWLTTATRICSGYQTLKRVTTTA

Sequences:

>Translated_207_residues
MLDSHLHPRLKPLLNAVAGALDRPGISPDGLTLVGFAIGVLALPFLALGWYGAALAAILLNRLLDGLDGALARRRGLTDA
GGFLDIALDFLFYALVPFGFILADPLNNALAGGWLLFAFIGTGSSFLAFAALAARHQIANPGYAHKSLYYLGGLTEGTET
ILLFVLGCLFPAHFAWLAWLFGALCWLTTATRICSGYQTLKRVTTTA
>Mature_207_residues
MLDSHLHPRLKPLLNAVAGALDRPGISPDGLTLVGFAIGVLALPFLALGWYGAALAAILLNRLLDGLDGALARRRGLTDA
GGFLDIALDFLFYALVPFGFILADPLNNALAGGWLLFAFIGTGSSFLAFAALAARHQIANPGYAHKSLYYLGGLTEGTET
ILLFVLGCLFPAHFAWLAWLFGALCWLTTATRICSGYQTLKRVTTTA

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=204, Percent_Identity=84.3137254901961, Blast_Score=315, Evalue=1e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 22007; Mature: 22007

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDSHLHPRLKPLLNAVAGALDRPGISPDGLTLVGFAIGVLALPFLALGWYGAALAAILL
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRLLDGLDGALARRRGLTDAGGFLDIALDFLFYALVPFGFILADPLNNALAGGWLLFAFI
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTGSSFLAFAALAARHQIANPGYAHKSLYYLGGLTEGTETILLFVLGCLFPAHFAWLAWL
HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FGALCWLTTATRICSGYQTLKRVTTTA
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDSHLHPRLKPLLNAVAGALDRPGISPDGLTLVGFAIGVLALPFLALGWYGAALAAILL
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRLLDGLDGALARRRGLTDAGGFLDIALDFLFYALVPFGFILADPLNNALAGGWLLFAFI
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTGSSFLAFAALAARHQIANPGYAHKSLYYLGGLTEGTETILLFVLGCLFPAHFAWLAWL
HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FGALCWLTTATRICSGYQTLKRVTTTA
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]