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The map label for this gene is ybgJ [H]

Identifier: 152969286

GI number: 152969286

Start: 810600

End: 811256

Strand: Direct

Name: ybgJ [H]

Synonym: KPN_00722

Alternate gene names: 152969286

Gene position: 810600-811256 (Clockwise)

Preceding gene: 152969285

Following gene: 152969287

Centisome position: 15.25

GC content: 62.4

Gene sequence:

>657_bases
GTGCAGCGAGCGCGTTGTTATCTGTTAGGTGAAACGGCGGTGGTCCTGGAGCTTGAGCCTCCGGTGACCCTGGAGAGCCA
AAAACGTATCTGGGGCCTGACGCAGCGGTTGACCGATCGCGAAGAGGTGGTTGAAGTGATCCCGGGGATGAACAACATCA
CCGTTGTGCTGCGTCGTCCGCAGGAGATGGCGTGGGAGGCGATTGACAAGCTGCAGCGCTGGTGGGAAGAGAGCGATGCG
CTGGAGCCGGAATCCCGTGAGATAAGTATCCCGGTTATCTACGGCGGCGAGGCGGGGCCAGATCTTGGCGACGTCGCGCG
CCATAGCGGTTTGAGCGAAAAGCAGGTGGTCGAACTGCACTCTTCGGTGGAGTATATGGTGTGGTTTCTGGGTTTCCAGC
CGGGGTTTCCGTATTTTGGCGGCCTGCCGGAGCAGCTGGCGATGCCGCGTCGCGCCGAGCCGCGCGTACTGGTACCGGCG
GGATCCGTCGGTATCGGCGGATCGCAAACCGGTATTTATCCGCTGGCGACGCCGGGCGGCTGGCAGCTGCTGGGGCGCAC
GCCGCTGGCATTATTCGATCCAAAACGTGAAGAGCCGGTGCTGCTGCGTTCCGGCGATCGCGTGCGCTTTGTGCCGCAGA
AGGAGGGGGTATGTTGA

Upstream 100 bases:

>100_bases
GGGGCGGCATTCGCGCCCTCAGCGAATGGCTGACGGAAACGACCGATCTGGATGTTACCTTTATTGATATTCCTAACCCT
GCCTGACGGGAGAGAAGAAA

Downstream 100 bases:

>100_bases
AATTTATCCGCGCCGGCATGTATACCTCGGTACAGGATGGCGGCCGGGAAGGCCAGCGCCAGTGGGGGATTAGCCGCTGC
GGCGCGCTGGATAAACCGGC

Product: putative carboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MQRARCYLLGETAVVLELEPPVTLESQKRIWGLTQRLTDREEVVEVIPGMNNITVVLRRPQEMAWEAIDKLQRWWEESDA
LEPESREISIPVIYGGEAGPDLGDVARHSGLSEKQVVELHSSVEYMVWFLGFQPGFPYFGGLPEQLAMPRRAEPRVLVPA
GSVGIGGSQTGIYPLATPGGWQLLGRTPLALFDPKREEPVLLRSGDRVRFVPQKEGVC

Sequences:

>Translated_218_residues
MQRARCYLLGETAVVLELEPPVTLESQKRIWGLTQRLTDREEVVEVIPGMNNITVVLRRPQEMAWEAIDKLQRWWEESDA
LEPESREISIPVIYGGEAGPDLGDVARHSGLSEKQVVELHSSVEYMVWFLGFQPGFPYFGGLPEQLAMPRRAEPRVLVPA
GSVGIGGSQTGIYPLATPGGWQLLGRTPLALFDPKREEPVLLRSGDRVRFVPQKEGVC
>Mature_218_residues
MQRARCYLLGETAVVLELEPPVTLESQKRIWGLTQRLTDREEVVEVIPGMNNITVVLRRPQEMAWEAIDKLQRWWEESDA
LEPESREISIPVIYGGEAGPDLGDVARHSGLSEKQVVELHSSVEYMVWFLGFQPGFPYFGGLPEQLAMPRRAEPRVLVPA
GSVGIGGSQTGIYPLATPGGWQLLGRTPLALFDPKREEPVLLRSGDRVRFVPQKEGVC

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=218, Percent_Identity=79.3577981651376, Blast_Score=355, Evalue=1e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 24372; Mature: 24372

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRARCYLLGETAVVLELEPPVTLESQKRIWGLTQRLTDREEVVEVIPGMNNITVVLRRP
CCCCEEEEEECEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECC
QEMAWEAIDKLQRWWEESDALEPESREISIPVIYGGEAGPDLGDVARHSGLSEKQVVELH
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHH
SSVEYMVWFLGFQPGFPYFGGLPEQLAMPRRAEPRVLVPAGSVGIGGSQTGIYPLATPGG
HHHEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCC
WQLLGRTPLALFDPKREEPVLLRSGDRVRFVPQKEGVC
EEEECCCCEEEECCCCCCCEEEECCCEEEEECCCCCCC
>Mature Secondary Structure
MQRARCYLLGETAVVLELEPPVTLESQKRIWGLTQRLTDREEVVEVIPGMNNITVVLRRP
CCCCEEEEEECEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECC
QEMAWEAIDKLQRWWEESDALEPESREISIPVIYGGEAGPDLGDVARHSGLSEKQVVELH
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHH
SSVEYMVWFLGFQPGFPYFGGLPEQLAMPRRAEPRVLVPAGSVGIGGSQTGIYPLATPGG
HHHEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCC
WQLLGRTPLALFDPKREEPVLLRSGDRVRFVPQKEGVC
EEEECCCCEEEECCCCCCCEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]