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The map label for this gene is yjiR [C]

Identifier: 152969141

GI number: 152969141

Start: 642655

End: 643989

Strand: Direct

Name: yjiR [C]

Synonym: KPN_00570

Alternate gene names: 152969141

Gene position: 642655-643989 (Clockwise)

Preceding gene: 152969140

Following gene: 152969143

Centisome position: 12.09

GC content: 65.39

Gene sequence:

>1335_bases
ATGAAAGCCCGATATAAAGCCGTTGTCGATCGATATGCGCAGGCGATCCGCAGCGGGCAGCTGCCCGCAGGCAGCCGTCT
GCCGACGCACCGTACCCTTGCCGCCGGGGAGCGCATCTCGCTGGCCACCGCCACGCGCGTCTACCGTGAACTGGAAGAGA
TGGGGCTGGTCAGCGGCGAAACCGGCCGCGGCACCTTCGTGCGCGACCTCTCGCTGCCGCCGGGGCACGGGGTCGATCAG
CAGGTGGTCGCCGCCGATGTCGTGGATCTCAATTTCAACTACCCTTCGCTGCCGGAGCAGGGCGATGCGCTGCGCGAGGC
GCTCAGGCAGCTGGCGATGGCGGGCGATATTGACTCGCATCTGCGCTATCAGCCTCACGCCGGGCGGCTTGCCGAGCGGG
ACATTATCGCCCGCCATTTGACCTGCCAGCACTTTGCGCCGGACGCGGAAAATGTCCTGATCGTCAACGGCGCACAGCAC
GGGCTGGCGGTGACCGTCATGGGGCTGTTACGTCCGGGGGATGTGGTGGCGGTGGATGCGCTGACCTATTCGGGCTTCAA
GGCTCTGGCGGCGCTGTATCATCTGGAGCTGGCGGCGATCCCCTGTCGACCGGAGGGACCGGACCTGCAGGCGCTTCATA
CCCTGTGCCAGCAGCGGCGGGTGCGGGCGGTGTATACCATGCCGACGCTGCACAATCCGCTGGGCTGGGTGCTCAACACC
GGTCAGCGGCAGGCGCTGGCCGATCTCGCGCGCCAGCACGACCTGCTGATTATTGAAGATGCCGCCTACGCCCGGCTGGT
GAGCCATCCGCCGCCGCCGGTGGTCAGCTATGCGCCGGAAAGAACGGTGTATGTCACCGGATTTTCAAAAAATATCGCCA
CCGGACTGCGCGTGGGCGTGGTGATTTCTCCGCCGCGCTATCGCCCGGAGATTGAGCGCGCCATCCGGGCCACGACGTGG
AATACGCCGACGCTGATAAGTTCGCTGATCTGCGCCTGGATTGAAGATGGCACGGTGGCGCGCTTTGAAACGCAGAAACG
CCAGGATGCGCGACAGCGACAGCAGGTGGCCCGCGAGGTGCTTTGTGGGCTTCCCGTCGTCAGTCATCCCGATTCGTACT
TCGTCTGGCTGCCGCTGGGTGAAGAGAGCCGGGCCGATCGGCTGGCGAATGCGCTGATGGAACGCCGCATTTCGGTATCG
ACCGCCGAGCCGTTCTGCGTCTCCGCCACGATCCCGCAGGCGCTGCGCATTGCGCTCGGATCGGTGCCTTTCGACAGCCT
GCGCCCGGCGCTGCTCAGCGTGCGCGACGCCGTTGAGTATGAACAATACCGCTAA

Upstream 100 bases:

>100_bases
GCGTTATCTGATTGGGCTTCGCCCGCTTGAGCATCGTCAGCGGCGATGGTAATGTGCCCAATCTAATACAATCAAATTAT
TGTCATAGATACATTTCGCG

Downstream 100 bases:

>100_bases
CCCATCTGCTCCAGCTGGCCGCGCAGGACCTCCACCCCCTGGGCGATGGCGTCGGGGTTAATGGCGTGGAATCCCATGCG
AAAATAGTTATCCGGCGGCG

Product: aminotransferase regulator domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKARYKAVVDRYAQAIRSGQLPAGSRLPTHRTLAAGERISLATATRVYRELEEMGLVSGETGRGTFVRDLSLPPGHGVDQ
QVVAADVVDLNFNYPSLPEQGDALREALRQLAMAGDIDSHLRYQPHAGRLAERDIIARHLTCQHFAPDAENVLIVNGAQH
GLAVTVMGLLRPGDVVAVDALTYSGFKALAALYHLELAAIPCRPEGPDLQALHTLCQQRRVRAVYTMPTLHNPLGWVLNT
GQRQALADLARQHDLLIIEDAAYARLVSHPPPPVVSYAPERTVYVTGFSKNIATGLRVGVVISPPRYRPEIERAIRATTW
NTPTLISSLICAWIEDGTVARFETQKRQDARQRQQVAREVLCGLPVVSHPDSYFVWLPLGEESRADRLANALMERRISVS
TAEPFCVSATIPQALRIALGSVPFDSLRPALLSVRDAVEYEQYR

Sequences:

>Translated_444_residues
MKARYKAVVDRYAQAIRSGQLPAGSRLPTHRTLAAGERISLATATRVYRELEEMGLVSGETGRGTFVRDLSLPPGHGVDQ
QVVAADVVDLNFNYPSLPEQGDALREALRQLAMAGDIDSHLRYQPHAGRLAERDIIARHLTCQHFAPDAENVLIVNGAQH
GLAVTVMGLLRPGDVVAVDALTYSGFKALAALYHLELAAIPCRPEGPDLQALHTLCQQRRVRAVYTMPTLHNPLGWVLNT
GQRQALADLARQHDLLIIEDAAYARLVSHPPPPVVSYAPERTVYVTGFSKNIATGLRVGVVISPPRYRPEIERAIRATTW
NTPTLISSLICAWIEDGTVARFETQKRQDARQRQQVAREVLCGLPVVSHPDSYFVWLPLGEESRADRLANALMERRISVS
TAEPFCVSATIPQALRIALGSVPFDSLRPALLSVRDAVEYEQYR
>Mature_444_residues
MKARYKAVVDRYAQAIRSGQLPAGSRLPTHRTLAAGERISLATATRVYRELEEMGLVSGETGRGTFVRDLSLPPGHGVDQ
QVVAADVVDLNFNYPSLPEQGDALREALRQLAMAGDIDSHLRYQPHAGRLAERDIIARHLTCQHFAPDAENVLIVNGAQH
GLAVTVMGLLRPGDVVAVDALTYSGFKALAALYHLELAAIPCRPEGPDLQALHTLCQQRRVRAVYTMPTLHNPLGWVLNT
GQRQALADLARQHDLLIIEDAAYARLVSHPPPPVVSYAPERTVYVTGFSKNIATGLRVGVVISPPRYRPEIERAIRATTW
NTPTLISSLICAWIEDGTVARFETQKRQDARQRQQVAREVLCGLPVVSHPDSYFVWLPLGEESRADRLANALMERRISVS
TAEPFCVSATIPQALRIALGSVPFDSLRPALLSVRDAVEYEQYR

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=293, Percent_Identity=26.962457337884, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI33469970, Length=293, Percent_Identity=26.962457337884, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1790797, Length=467, Percent_Identity=25.0535331905782, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1787710, Length=450, Percent_Identity=26.6666666666667, Blast_Score=115, Evalue=8e-27,
Organism=Drosophila melanogaster, GI21356535, Length=355, Percent_Identity=25.0704225352113, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 48954; Mature: 48954

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARYKAVVDRYAQAIRSGQLPAGSRLPTHRTLAAGERISLATATRVYRELEEMGLVSGE
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
TGRGTFVRDLSLPPGHGVDQQVVAADVVDLNFNYPSLPEQGDALREALRQLAMAGDIDSH
CCCCCEEEECCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHH
LRYQPHAGRLAERDIIARHLTCQHFAPDAENVLIVNGAQHGLAVTVMGLLRPGDVVAVDA
CEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEH
LTYSGFKALAALYHLELAAIPCRPEGPDLQALHTLCQQRRVRAVYTMPTLHNPLGWVLNT
HHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCC
GQRQALADLARQHDLLIIEDAAYARLVSHPPPPVVSYAPERTVYVTGFSKNIATGLRVGV
CCHHHHHHHHHHCCEEEEECHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHCCEEEEE
VISPPRYRPEIERAIRATTWNTPTLISSLICAWIEDGTVARFETQKRQDARQRQQVAREV
EECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
LCGLPVVSHPDSYFVWLPLGEESRADRLANALMERRISVSTAEPFCVSATIPQALRIALG
HHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHC
SVPFDSLRPALLSVRDAVEYEQYR
CCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKARYKAVVDRYAQAIRSGQLPAGSRLPTHRTLAAGERISLATATRVYRELEEMGLVSGE
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
TGRGTFVRDLSLPPGHGVDQQVVAADVVDLNFNYPSLPEQGDALREALRQLAMAGDIDSH
CCCCCEEEECCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHH
LRYQPHAGRLAERDIIARHLTCQHFAPDAENVLIVNGAQHGLAVTVMGLLRPGDVVAVDA
CEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEH
LTYSGFKALAALYHLELAAIPCRPEGPDLQALHTLCQQRRVRAVYTMPTLHNPLGWVLNT
HHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCC
GQRQALADLARQHDLLIIEDAAYARLVSHPPPPVVSYAPERTVYVTGFSKNIATGLRVGV
CCHHHHHHHHHHCCEEEEECHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHCCEEEEE
VISPPRYRPEIERAIRATTWNTPTLISSLICAWIEDGTVARFETQKRQDARQRQQVAREV
EECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
LCGLPVVSHPDSYFVWLPLGEESRADRLANALMERRISVSTAEPFCVSATIPQALRIALG
HHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHC
SVPFDSLRPALLSVRDAVEYEQYR
CCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1400197 [H]