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The map label for this gene is ycjS [C]

Identifier: 152969111

GI number: 152969111

Start: 604862

End: 606043

Strand: Direct

Name: ycjS [C]

Synonym: KPN_00540

Alternate gene names: 152969111

Gene position: 604862-606043 (Clockwise)

Preceding gene: 152969110

Following gene: 152969113

Centisome position: 11.38

GC content: 63.79

Gene sequence:

>1182_bases
ATGACTTTGCCGCCGGCGGGAGGGAATAACATGATTCAGGTCGCGATTATCGGGGCAGGGTTTATTGGCCCGGCGCATCT
GGAGGCGCTGCGGCGGCTGGGAGATGTCGAGGTGGTGGCGCTGTGCGACAGCCGCCTTGAGGCGGCGCAGCGCAAGGCGC
GAGCGCTGAACATTGCCCATGCCTACGACAGCGTGGAGGCGCTGCTGGCCCATCCGGGGCTGCAGGTGGTGCATAACTGT
ACGCCGAACCATTTGCATGCCCAGATTAACCGGCAGATCCTCGCCGCCGGGCTGCACGTCTTCTCGGAAAAGCCGCTGTG
TATGACGGCGGGGGAGGCGCGGGAGCTGGTGGCGCTTGCCGCCCGGGCCGGCGTGGTGCATGGCGTCAGCTTCGTCTATC
GCCAGTTCGCTATGGTCCAGCAGGCGGCGGCGATGATCCGCCATGGCGAGGTCGGCAGAATCTTCGCGGCCCACGGCAGC
TATTTACAGGACTGGATGCTGCTGGAGACCGACTACAACTGGCGGGTCGATTCGGCGCAGGGCGGCGCGTCGCGGACGGT
GGCCGACATCGGCTCCCACTGGTGCGATACCGTGCAGTTTATGACCGGTCGGCGGATTGTCGAGGTGATGGCGGATCTGT
CTATCGTCTGGCCAACGCGTAAAGCGCCGGTCAATGGTAAAGCGACCTTCAGCGCCGTTCACGAGGCGCAGGCATATGAA
ACGCGGCCTGTCGATACCGAGGACTTTGGCTCGGTGCTGTTGCGTTTTGACGATGGCAGCAAAGGCAGCTTTATGGTCTC
TCAGGTGAGCGCCGGGCGGAAAAACCGTCTGGCGGTGGAGATTAACGGCAGCCTCTGTTCTCTGGCCTGGGATCAGGAAG
TGCCCCAGCGGCTGTGGATCGGCCACCGCGAGCAGCCGGATCGCCTGCTCAGCGATGACCCGAGCCTGCTGCGGCCGGAA
ATCGCTGACAGCGCCCATTACCCCGGCGGCCATATTGAGGGCTGGCCGGACGCCTTTAAGAATATGATGGGGCATTTTTA
TCAGGCGGTGCGCGCCGGGAAGATGCCAGCGGCCGGGGCCCGGCGCTTCGCCGCTTTCGACGACGGCGCCGATGTGATGT
ACATCATCGAGGCGATTGTCAAAAGCCATCAGGAACAGCGCTGGGTCAGCGTCGAACGCTGA

Upstream 100 bases:

>100_bases
CTGGAGTGGGAGTGCTGCCTGAAGGATAGTGAGACCGGCGCGCGCGAGGGCAGCGAGTTTATCCGCCGCCATATCATTCC
CGTTGCCGGACGGGCCTTCG

Downstream 100 bases:

>100_bases
GCGCAGGTGGGGCGCAGGATTATTTCACCCCAAGATAGCCGTCGAGATAGGCACCGGAGAGCTCGTTGCCGAACAGGACG
GCATCTTTATTTTCCATCGC

Product: putative NADH-dependent dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MTLPPAGGNNMIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKARALNIAHAYDSVEALLAHPGLQVVHNC
TPNHLHAQINRQILAAGLHVFSEKPLCMTAGEARELVALAARAGVVHGVSFVYRQFAMVQQAAAMIRHGEVGRIFAAHGS
YLQDWMLLETDYNWRVDSAQGGASRTVADIGSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVHEAQAYE
TRPVDTEDFGSVLLRFDDGSKGSFMVSQVSAGRKNRLAVEINGSLCSLAWDQEVPQRLWIGHREQPDRLLSDDPSLLRPE
IADSAHYPGGHIEGWPDAFKNMMGHFYQAVRAGKMPAAGARRFAAFDDGADVMYIIEAIVKSHQEQRWVSVER

Sequences:

>Translated_393_residues
MTLPPAGGNNMIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKARALNIAHAYDSVEALLAHPGLQVVHNC
TPNHLHAQINRQILAAGLHVFSEKPLCMTAGEARELVALAARAGVVHGVSFVYRQFAMVQQAAAMIRHGEVGRIFAAHGS
YLQDWMLLETDYNWRVDSAQGGASRTVADIGSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVHEAQAYE
TRPVDTEDFGSVLLRFDDGSKGSFMVSQVSAGRKNRLAVEINGSLCSLAWDQEVPQRLWIGHREQPDRLLSDDPSLLRPE
IADSAHYPGGHIEGWPDAFKNMMGHFYQAVRAGKMPAAGARRFAAFDDGADVMYIIEAIVKSHQEQRWVSVER
>Mature_392_residues
TLPPAGGNNMIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKARALNIAHAYDSVEALLAHPGLQVVHNCT
PNHLHAQINRQILAAGLHVFSEKPLCMTAGEARELVALAARAGVVHGVSFVYRQFAMVQQAAAMIRHGEVGRIFAAHGSY
LQDWMLLETDYNWRVDSAQGGASRTVADIGSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVHEAQAYET
RPVDTEDFGSVLLRFDDGSKGSFMVSQVSAGRKNRLAVEINGSLCSLAWDQEVPQRLWIGHREQPDRLLSDDPSLLRPEI
ADSAHYPGGHIEGWPDAFKNMMGHFYQAVRAGKMPAAGARRFAAFDDGADVMYIIEAIVKSHQEQRWVSVER

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=196, Percent_Identity=33.1632653061224, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43133; Mature: 43001

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPPAGGNNMIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKARALNIAH
CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH
AYDSVEALLAHPGLQVVHNCTPNHLHAQINRQILAAGLHVFSEKPLCMTAGEARELVALA
HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHH
ARAGVVHGVSFVYRQFAMVQQAAAMIRHGEVGRIFAAHGSYLQDWMLLETDYNWRVDSAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCEEEEECCCCEEECCCC
GGASRTVADIGSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVHEAQAYE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHC
TRPVDTEDFGSVLLRFDDGSKGSFMVSQVSAGRKNRLAVEINGSLCSLAWDQEVPQRLWI
CCCCCHHCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCEEEEECCHHHHHHHHC
GHREQPDRLLSDDPSLLRPEIADSAHYPGGHIEGWPDAFKNMMGHFYQAVRAGKMPAAGA
CCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
RRFAAFDDGADVMYIIEAIVKSHQEQRWVSVER
HHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLPPAGGNNMIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKARALNIAH
CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH
AYDSVEALLAHPGLQVVHNCTPNHLHAQINRQILAAGLHVFSEKPLCMTAGEARELVALA
HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHH
ARAGVVHGVSFVYRQFAMVQQAAAMIRHGEVGRIFAAHGSYLQDWMLLETDYNWRVDSAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCEEEEECCCCEEECCCC
GGASRTVADIGSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVHEAQAYE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHC
TRPVDTEDFGSVLLRFDDGSKGSFMVSQVSAGRKNRLAVEINGSLCSLAWDQEVPQRLWI
CCCCCHHCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCEEEEECCHHHHHHHHC
GHREQPDRLLSDDPSLLRPEIADSAHYPGGHIEGWPDAFKNMMGHFYQAVRAGKMPAAGA
CCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
RRFAAFDDGADVMYIIEAIVKSHQEQRWVSVER
HHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]