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The map label for this gene is fimB [H]

Identifier: 152969063

GI number: 152969063

Start: 537620

End: 538315

Strand: Direct

Name: fimB [H]

Synonym: KPN_00492

Alternate gene names: 152969063

Gene position: 537620-538315 (Clockwise)

Preceding gene: 152969062

Following gene: 152969064

Centisome position: 10.11

GC content: 57.33

Gene sequence:

>696_bases
ATGCGGCGTATGGTTCTGGCACTGCTGCTGTCCAGCTATTTACCCTCGGCGGACGCCAGTATGGTTATTGACGGCACACG
GATTATTTTTTCCGGCGACAAAAAAGAGATCGCCGTCCGGGCCACCAATATGGGGGAGACCCCCTCTCTGACGCAGGTCT
GGGTCGACGATGGCCGCGTGCAAAATCAACCGGAAAAGGATGCGGCGCCGTTTATTGTGCTGCCGCCGATTGTGCGCATC
GAACCGGGAAAAGGCCAGAGCTGGCGCCTGGTGTTTAACGGCAGCCGCCTGCCGCAGGATCGGGAATCGCTGTTCTGGTT
CAATCTTCTGGATATCCCACCTGAGCCGAAAAATGGCAAGACTGACAATTACCTGCAGCTCGCGATACGGTCGCGTATCA
AGCTGTTTTACCGTCCGGCAGGCGTGGCGGCGGAAAAAATAGCCGCGGAAAAAGCCCTGAGCTGGGCGCTGGCTCCTACG
GGCAACGGGTTGCGGGTGAGCAATGCCTCAGCGCGCTATATCACCATCGACAGCATCACCCTTAACGGACAAAAACACGC
TGCCGGCATGGTCGCCCCGTTTTCCTCGCTGGAGATCGCGCCTAAAGGGGTCGCGCTGCGCACGCTGCCAGCCAAATTCA
GCTTCACCACCATCAATGATTACGGCGCGGTAGTGAATCATAATTATCCTCAGTAA

Upstream 100 bases:

>100_bases
AAAGTCGCTACCTACGTCAACTTTACGGTGGTCTATCCGTAACCCCTGTCCACGGCCCCGCTCAGGGGCCGTTTATCCAC
CCGGCAAGGAGGAGGTGAAT

Downstream 100 bases:

>100_bases
GGACATTATTATGAAACTCAGGGAGATCAAGGTTGGGTTGATGCTGCTCCTTCCCTGGCAGGAGGCATGGGCGGCAGAGG
CGTTTAGTTTTAACCGCGCC

Product: pilin chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MRRMVLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRI
EPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPT
GNGLRVSNASARYITIDSITLNGQKHAAGMVAPFSSLEIAPKGVALRTLPAKFSFTTINDYGAVVNHNYPQ

Sequences:

>Translated_231_residues
MRRMVLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRI
EPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPT
GNGLRVSNASARYITIDSITLNGQKHAAGMVAPFSSLEIAPKGVALRTLPAKFSFTTINDYGAVVNHNYPQ
>Mature_231_residues
MRRMVLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRI
EPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPT
GNGLRVSNASARYITIDSITLNGQKHAAGMVAPFSSLEIAPKGVALRTLPAKFSFTTINDYGAVVNHNYPQ

Specific function: Required for the biogenesis of the filamentous hemagglutinin and the fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1786333, Length=226, Percent_Identity=38.4955752212389, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1788428, Length=223, Percent_Identity=37.219730941704, Blast_Score=147, Evalue=6e-37,
Organism=Escherichia coli, GI1786936, Length=227, Percent_Identity=35.2422907488987, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786743, Length=233, Percent_Identity=35.1931330472103, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1789532, Length=228, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790771, Length=234, Percent_Identity=32.0512820512821, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1788677, Length=208, Percent_Identity=31.7307692307692, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI87082203, Length=228, Percent_Identity=28.9473684210526, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787171, Length=220, Percent_Identity=28.6363636363636, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI87081806, Length=232, Percent_Identity=29.3103448275862, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 25363; Mature: 25363

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMVLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRV
CHHHHHHHHHHHHCCCCCCEEEEECEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCC
QNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGK
CCCCCCCCCCEEEECCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCC
TDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPTGNGLRVSNASARYITIDSIT
CCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHEEEECCCCCCEEEECCCEEEEEEEEEE
LNGQKHAAGMVAPFSSLEIAPKGVALRTLPAKFSFTTINDYGAVVNHNYPQ
ECCCCCCCEEECCCCCCEECCCCEEEEEECCEEEEEEECCCCCEECCCCCC
>Mature Secondary Structure
MRRMVLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRV
CHHHHHHHHHHHHCCCCCCEEEEECEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCC
QNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGK
CCCCCCCCCCEEEECCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCC
TDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPTGNGLRVSNASARYITIDSIT
CCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHEEEECCCCCCEEEECCCEEEEEEEEEE
LNGQKHAAGMVAPFSSLEIAPKGVALRTLPAKFSFTTINDYGAVVNHNYPQ
ECCCCCCCEEECCCCCCEECCCCEEEEEECCEEEEEEECCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1360139; 1354611; 12910271 [H]