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The map label for this gene is yadE [H]

Identifier: 152968719

GI number: 152968719

Start: 163662

End: 164915

Strand: Direct

Name: yadE [H]

Synonym: KPN_00138

Alternate gene names: 152968719

Gene position: 163662-164915 (Clockwise)

Preceding gene: 152968718

Following gene: 152968729

Centisome position: 3.08

GC content: 55.82

Gene sequence:

>1254_bases
ATGCGTATGCTTGCCCGATTTTTGACCCTGCTTCTTTTCCTGACCTCACTCAGCGCCTCCGCCAGCCTGCTTAGCCAGCA
CGGCAAGGCTGTGCGCTATATGCAAACCACCGAAGACGCGGTCATCTGGGCGCAGGTGGGAAACCATGTGGTCAGCGTCG
GCAATGTTCGTGCCGGGCAGATCCTCGCAGTCGTCCCGACGGCGGCTGACTACTATGAGTTTCGTTTCGGCTTTGGCACC
GGGTTTATTGATAAAGGGCATCTCGAGCCGGTGCAGGGCAAGCAGCGGGTGGAGGACCGTCTGGGGGATCTTAATAAACC
GCTGAGTAACCAAAATTTACTCACCTGGAAAGATACACCGCTCTATGACGCTCCCTCGGTAAGCAGCGCGCCGTTCGGCA
CGCTGGCCAACAATCTGCGCTATCCGATCCTCAGCAAGCTGAAGGACCGGCTCAATCAGACCTGGTTTCAGATCCGCATT
GGCGACCGGCTGGCGTGGGTCAGTAGTCTGGACGCGCAGGAGGATCACGGTATTCCCGTGCTGACCTATCACCATATTCT
GCGCGATGAAGAGAACACCCGTTTTCGTCATACGTCGACCACCACCTCGGTTCGCGCCTTCACGAATCAGATGACCTGGC
TGCGCGATCAGGGCTATACCACGCTGACCCTGTATCAGCTGGAAGGCTATGTGCGTAATAAAATCAATCTCCCGGCGCGG
GCGGTGGCGATCACTTTCGATGATGGCTTGAAATCGGTGAACCGCTACGCCTATCCGGTGCTGAAACAGTACGGTTTCCA
TGCCACCGCGTTTATTATCTCCTCGCGTATTAAGCGCCATCCGCAGAAGTGGGATCCGAAATCCCTGCAGTTTATGAGCA
TTTCCGAGCTACGCCAGATCCAGGACGTTTTTGATATTCAGTCGCATACTCACTTCTTGCATCGGGTTGACGCCGGCCGG
CGGCCGATTTTATTCAGTCGCAATTACCATAATATTCTGTTTGATTTCGCCCGCTCGCGCCGGGCGCTGAGCCAGTTTAA
TCCGCACGTTCTCTACCTTTCCTATCCCTTCGGCGGCTATAACGCTACGGCGGTGCAGGCGGCGAATGACGCCGGGTTTC
ATATGGCGGTAACGACGGTGCGTGGGAAGGTGAAGCCGGGGGACAATCCGTTTCTGTTAAAGCGGTTATATATCTTACGA
ACGGATTCGCTGGAGACGATGTCGCGGCTGATCAGTAACCAGCCGCAGGGGTAA

Upstream 100 bases:

>100_bases
AACCCCCCGTTCCGGTTGCGCCATGATGCCTGGGGAAATTAAGCAGCGGGACAGATACCGCTTTTGTTACAATAACCGCC
GTTGATGGTATAACGGTTTG

Downstream 100 bases:

>100_bases
TACCGACGCTGCGCCTGAGCGCAGCGTCGCGGCCATCAGGCGACCTGTACCGGAATAGCTTTTGCCTGGCGCTTCATTTC
GTTGTCGCCTTCGAAGTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MRMLARFLTLLLFLTSLSASASLLSQHGKAVRYMQTTEDAVIWAQVGNHVVSVGNVRAGQILAVVPTAADYYEFRFGFGT
GFIDKGHLEPVQGKQRVEDRLGDLNKPLSNQNLLTWKDTPLYDAPSVSSAPFGTLANNLRYPILSKLKDRLNQTWFQIRI
GDRLAWVSSLDAQEDHGIPVLTYHHILRDEENTRFRHTSTTTSVRAFTNQMTWLRDQGYTTLTLYQLEGYVRNKINLPAR
AVAITFDDGLKSVNRYAYPVLKQYGFHATAFIISSRIKRHPQKWDPKSLQFMSISELRQIQDVFDIQSHTHFLHRVDAGR
RPILFSRNYHNILFDFARSRRALSQFNPHVLYLSYPFGGYNATAVQAANDAGFHMAVTTVRGKVKPGDNPFLLKRLYILR
TDSLETMSRLISNQPQG

Sequences:

>Translated_417_residues
MRMLARFLTLLLFLTSLSASASLLSQHGKAVRYMQTTEDAVIWAQVGNHVVSVGNVRAGQILAVVPTAADYYEFRFGFGT
GFIDKGHLEPVQGKQRVEDRLGDLNKPLSNQNLLTWKDTPLYDAPSVSSAPFGTLANNLRYPILSKLKDRLNQTWFQIRI
GDRLAWVSSLDAQEDHGIPVLTYHHILRDEENTRFRHTSTTTSVRAFTNQMTWLRDQGYTTLTLYQLEGYVRNKINLPAR
AVAITFDDGLKSVNRYAYPVLKQYGFHATAFIISSRIKRHPQKWDPKSLQFMSISELRQIQDVFDIQSHTHFLHRVDAGR
RPILFSRNYHNILFDFARSRRALSQFNPHVLYLSYPFGGYNATAVQAANDAGFHMAVTTVRGKVKPGDNPFLLKRLYILR
TDSLETMSRLISNQPQG
>Mature_417_residues
MRMLARFLTLLLFLTSLSASASLLSQHGKAVRYMQTTEDAVIWAQVGNHVVSVGNVRAGQILAVVPTAADYYEFRFGFGT
GFIDKGHLEPVQGKQRVEDRLGDLNKPLSNQNLLTWKDTPLYDAPSVSSAPFGTLANNLRYPILSKLKDRLNQTWFQIRI
GDRLAWVSSLDAQEDHGIPVLTYHHILRDEENTRFRHTSTTTSVRAFTNQMTWLRDQGYTTLTLYQLEGYVRNKINLPAR
AVAITFDDGLKSVNRYAYPVLKQYGFHATAFIISSRIKRHPQKWDPKSLQFMSISELRQIQDVFDIQSHTHFLHRVDAGR
RPILFSRNYHNILFDFARSRRALSQFNPHVLYLSYPFGGYNATAVQAANDAGFHMAVTTVRGKVKPGDNPFLLKRLYILR
TDSLETMSRLISNQPQG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=415, Percent_Identity=78.0722891566265, Blast_Score=688, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 47580; Mature: 47580

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMLARFLTLLLFLTSLSASASLLSQHGKAVRYMQTTEDAVIWAQVGNHVVSVGNVRAGQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEEEEECCCCCCE
ILAVVPTAADYYEFRFGFGTGFIDKGHLEPVQGKQRVEDRLGDLNKPLSNQNLLTWKDTP
EEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCC
LYDAPSVSSAPFGTLANNLRYPILSKLKDRLNQTWFQIRIGDRLAWVSSLDAQEDHGIPV
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEEEECCEEEEHHCCCCCCCCCCEE
LTYHHILRDEENTRFRHTSTTTSVRAFTNQMTWLRDQGYTTLTLYQLEGYVRNKINLPAR
EEEHHHHCCCCCCCEEECCCCHHHHHHHHHHHHEECCCCEEEEEEEECCHHHCCCCCCEE
AVAITFDDGLKSVNRYAYPVLKQYGFHATAFIISSRIKRHPQKWDPKSLQFMSISELRQI
EEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHH
QDVFDIQSHTHFLHRVDAGRRPILFSRNYHNILFDFARSRRALSQFNPHVLYLSYPFGGY
HHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
NATAVQAANDAGFHMAVTTVRGKVKPGDNPFLLKRLYILRTDSLETMSRLISNQPQG
CCEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHEEHHHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MRMLARFLTLLLFLTSLSASASLLSQHGKAVRYMQTTEDAVIWAQVGNHVVSVGNVRAGQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEEEEECCCCCCE
ILAVVPTAADYYEFRFGFGTGFIDKGHLEPVQGKQRVEDRLGDLNKPLSNQNLLTWKDTP
EEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCC
LYDAPSVSSAPFGTLANNLRYPILSKLKDRLNQTWFQIRIGDRLAWVSSLDAQEDHGIPV
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEEEECCEEEEHHCCCCCCCCCCEE
LTYHHILRDEENTRFRHTSTTTSVRAFTNQMTWLRDQGYTTLTLYQLEGYVRNKINLPAR
EEEHHHHCCCCCCCEEECCCCHHHHHHHHHHHHEECCCCEEEEEEEECCHHHCCCCCCEE
AVAITFDDGLKSVNRYAYPVLKQYGFHATAFIISSRIKRHPQKWDPKSLQFMSISELRQI
EEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHH
QDVFDIQSHTHFLHRVDAGRRPILFSRNYHNILFDFARSRRALSQFNPHVLYLSYPFGGY
HHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
NATAVQAANDAGFHMAVTTVRGKVKPGDNPFLLKRLYILRTDSLETMSRLISNQPQG
CCEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHEEHHHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]