Click here to switch to the map view.

The map label for this gene is lacB

Identifier: 151222310

GI number: 151222310

Start: 2336296

End: 2336811

Strand: Reverse

Name: lacB

Synonym: NWMN_2098

Alternate gene names: 151222310

Gene position: 2336811-2336296 (Counterclockwise)

Preceding gene: 151222311

Following gene: 151222309

Centisome position: 81.17

GC content: 34.69

Gene sequence:

>516_bases
ATGAAGATTGCATTAGGATGCGACCATATTGTTACAGATACAAAAATGCGTGTATCTGAATTTTTAAAATCAAAAGGACA
TGAAGTCATTGACGTAGGAACATACGATTTCACAAGAACACATTATCCAATTTTTGGTAAAAAAGTTGGCGAACAAGTTG
TTAGCGGTAATGCAGACTTAGGTGTTTGTATTTGTGGAACAGGTGTTGGTATTAACAATGCTGTAAATAAAGTACCTGGC
GTTCGTTCAGCACTAGTACGTGATATGACATCAGCGTTATACGCTAAAGAAGAATTAAATGCGAACGTTATTGGCTTCGG
TGGACGTATTATAGGTGAGTTATTAATGTGCGATATTATCGATGCATTTATTAATGCTGAATATAAACCAACTGAAGAGA
ACAAAAAATTAATCGCTAAAATTAAACATTTAGAAACAAGCAATGCAGATCAAGCTGATCCACATTTCTTTGATGAATTC
TTAGAAAAATGGGACAGAGGCGAATACCACGATTAA

Upstream 100 bases:

>100_bases
AAATGTCGTTAAAGGTTTTGTTGAAGGTAAATACGATGGTGGTAGACACCAAATCCGCGTAGATATGCTTAATAAAATGT
GCTAAGGAGGAAAAATTACT

Downstream 100 bases:

>100_bases
GGGACGACACATATGATTTTAACTTTAACATTAAATCCATCCGTTGATATTTCATACCCATTAACAGCATTGAAATTAGA
TGATGTTAATCGTGTTCAAG

Product: galactose-6-phosphate isomerase subunit LacB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG
VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF
LEKWDRGEYHD

Sequences:

>Translated_171_residues
MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG
VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF
LEKWDRGEYHD
>Mature_171_residues
MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG
VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF
LEKWDRGEYHD

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=138, Percent_Identity=38.4057971014493, Blast_Score=103, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004784
- InterPro:   IPR003500 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.26 [H]

Molecular weight: Translated: 18951; Mature: 18951

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADL
CEEECCCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCE
GVCICGTGVGINNAVNKVPGVRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDII
EEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH
DAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEFLEKWDRGEYHD
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADL
CEEECCCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCE
GVCICGTGVGINNAVNKVPGVRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDII
EEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH
DAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEFLEKWDRGEYHD
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA