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The map label for this gene is lukF

Identifier: 151222139

GI number: 151222139

Start: 2133340

End: 2134356

Strand: Reverse

Name: lukF

Synonym: NWMN_1927

Alternate gene names: NA

Gene position: 2134356-2133340 (Counterclockwise)

Preceding gene: 151222140

Following gene: 151222132

Centisome position: 74.14

GC content: 30.48

Gene sequence:

>1017_bases
ATGATTAAACAACTATGTAAAAATATCACAATTTGTACGTTAGCACTATCGACTACTTTCACTGTATTACCAGCTACTTC
ATTTGCAAAGATTAATTCTGAAATCAAACAAGTTTCTGAGAAGAATCTTGATGGTGATACTAAAATGTATACACGTACAG
CTACAACAAGTGATAGTCAAAAAAATATTACTCAAAGCTTACAATTTAATTTCTTAACTGAACCTAATTATGATAAAGAA
ACAGTATTTATTAAAGCAAAAGGTACAATTGGTAGTGGTTTGAGAATTTTAGACCCAAATGGTTATTGGAATAGTACATT
AAGATGGCCTGGATCTTATTCAGTTTCAATTCAAAATGTTGATGACAACAACAATACAAATGTGACTGACTTTGCACCAA
AAAATCAGGATGAATCAAGAGAAGTTAAATATACGTATGGTTATAAAACAGGTGGAGATTTTTCGATTAATCGTGGAGGC
TTAACTGGAAATATTACAAAAGAGAGTAATTATTCAGAGACGATTAGTTATCAACAACCATCATATCGTACATTACTTGA
TCAATCTACGTCACATAAAGGTGTAGGTTGGAAAGTAGAAGCACATTTGATAAATAATATGGGACATGACCATACGAGAC
AATTAACTAATGATAGTGATAATAGAACTAAAAGTGAAATTTTTTCTTTAACACGAAATGGAAATTTATGGGCGAAAGAT
AATTTCACACCTAAAGACAAAATGCCTGTAACTGTGTCTGAAGGGTTTAATCCAGAATTTTTAGCTGTTATGTCACATGA
TAAAAAAGACAAAGGTAAATCACAATTTGTTGTTCATTATAAAAGATCAATGGATGAGTTTAAAATAGATTGGAATCGCC
ATGGTTTCTGGGGCTATTGGTCTGGTGAAAACCATGTAGATAAAAAAGAAGAAAAATTATCAGCATTATATGAAGTTGAT
TGGAAGACACATAATGTGAAGTTTGTAAAAGTACTTAATGATAATGAAAAGAAATAA

Upstream 100 bases:

>100_bases
TGAAGTTGATTGGAAAAATAAAACAGTTAAAGTCGTTGATAAATATTCTGATGACAATAAACCTTATAAAGAAGGATAAT
ATTGAAAGGGCGGATTACTA

Downstream 100 bases:

>100_bases
GTAATAAAAGTTGCCTGCTACATAGAATGTAGTAGGTAACTTTTATTTATATTTGAATAGATAGATTTATTATGACGTGC
AGTGTATGAATCTTGTTTGA

Product: leukocidin/hemolysin toxin subunit F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MIKQLCKNITICTLALSTTFTVLPATSFAKINSEIKQVSEKNLDGDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKE
TVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGG
LTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVD
WKTHNVKFVKVLNDNEKK

Sequences:

>Translated_338_residues
MIKQLCKNITICTLALSTTFTVLPATSFAKINSEIKQVSEKNLDGDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKE
TVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGG
LTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVD
WKTHNVKFVKVLNDNEKK
>Mature_338_residues
MIKQLCKNITICTLALSTTFTVLPATSFAKINSEIKQVSEKNLDGDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKE
TVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGG
LTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVD
WKTHNVKFVKVLNDNEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aerolysin family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LUKL1_STAA3 (Q2FFA3)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_494625.1
- ProteinModelPortal:   Q2FFA3
- SMR:   Q2FFA3
- EnsemblBacteria:   EBSTAT00000038087
- GeneID:   3913314
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_1974
- GeneTree:   EBGT00050000023901
- HOGENOM:   HBG216024
- OMA:   VCKNITI
- ProtClustDB:   CLSK885717
- GO:   GO:0009405
- InterPro:   IPR003963
- InterPro:   IPR001340
- InterPro:   IPR016183
- PRINTS:   PR01468
- TIGRFAMs:   TIGR01002

Pfam domain/function: PF07968 Leukocidin; SSF56959 Leukocidin/Porin

EC number: NA

Molecular weight: Translated: 38686; Mature: 38686

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQLCKNITICTLALSTTFTVLPATSFAKINSEIKQVSEKNLDGDTKMYTRTATTSDSQ
CHHHHHCCCEEEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCH
KNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNV
HHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCEEECCCCEEEEEEEC
DDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQP
CCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCEECCCCC
SYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
CHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHEEECCCCEEECC
NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYW
CCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEE
SGENHVDKKEEKLSALYEVDWKTHNVKFVKVLNDNEKK
CCCCCCCHHHHHHHHHEEECCEECCEEEEEEECCCCCC
>Mature Secondary Structure
MIKQLCKNITICTLALSTTFTVLPATSFAKINSEIKQVSEKNLDGDTKMYTRTATTSDSQ
CHHHHHCCCEEEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCH
KNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNV
HHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCEEECCCCEEEEEEEC
DDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQP
CCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCEECCCCC
SYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
CHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHEEECCCCEEECC
NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYW
CCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEE
SGENHVDKKEEKLSALYEVDWKTHNVKFVKVLNDNEKK
CCCCCCCHHHHHHHHHEEECCEECCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA