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The map label for this gene is catD [H]

Identifier: 151221119

GI number: 151221119

Start: 1005559

End: 1005936

Strand: Reverse

Name: catD [H]

Synonym: NWMN_0907

Alternate gene names: 151221119

Gene position: 1005936-1005559 (Counterclockwise)

Preceding gene: 151221121

Following gene: 151221116

Centisome position: 34.94

GC content: 32.54

Gene sequence:

>378_bases
ATGAATGTTGGAGGTGACATGATGAAATTAGGTATGCTTTTAATTAGATGGATGTTAGCAACATCATTCTTAGTGCATGG
TACTTTGAAATTTGTTGATTTAGATGGAACAATTCACTTCTTAGGCTCTTTAGGTTTACCACCTACCATCGCAGTATTGA
TGTCAATTGGTGAAGTTGTTGGAGGTTTAGCACTTATTATCGGCTTTTTAACGCCTTATGTTAATGTTTTTTATATTTGT
GTTATGTTAGGCTCAATCTTCACACTTAAACTTACAAGAGGATATGTAAGTGGTTATGAATTTGAAATCATACATATCGT
AATGAACTTAGCTTGTATTAGTAGTTACAGCTGGAAGAAATGGCTACAATTTTATTAA

Upstream 100 bases:

>100_bases
AACAATTGTTCAATACAATAGAATATTTAATAATTAATCTTATAAAAAATCTTTACTTTCCACATGTTTACAAATATAAT
TTGGACTATGTTTTAAAAAT

Downstream 100 bases:

>100_bases
CTATTGTTTGAGAGGACTATCCTCTCTTTTTTTGTATTTATCATGCGTAAAAATCCTAGGTACTCATGAATACCTAGGAT
TTTTTCATTTAGCTATTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MNVGGDMMKLGMLLIRWMLATSFLVHGTLKFVDLDGTIHFLGSLGLPPTIAVLMSIGEVVGGLALIIGFLTPYVNVFYIC
VMLGSIFTLKLTRGYVSGYEFEIIHIVMNLACISSYSWKKWLQFY

Sequences:

>Translated_125_residues
MNVGGDMMKLGMLLIRWMLATSFLVHGTLKFVDLDGTIHFLGSLGLPPTIAVLMSIGEVVGGLALIIGFLTPYVNVFYIC
VMLGSIFTLKLTRGYVSGYEFEIIHIVMNLACISSYSWKKWLQFY
>Mature_125_residues
MNVGGDMMKLGMLLIRWMLATSFLVHGTLKFVDLDGTIHFLGSLGLPPTIAVLMSIGEVVGGLALIIGFLTPYVNVFYIC
VMLGSIFTLKLTRGYVSGYEFEIIHIVMNLACISSYSWKKWLQFY

Specific function: Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 13934; Mature: 13934

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVGGDMMKLGMLLIRWMLATSFLVHGTLKFVDLDGTIHFLGSLGLPPTIAVLMSIGEVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCHHHHHHHHHHHHH
GGLALIIGFLTPYVNVFYICVMLGSIFTLKLTRGYVSGYEFEIIHIVMNLACISSYSWKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
WLQFY
HHHCC
>Mature Secondary Structure
MNVGGDMMKLGMLLIRWMLATSFLVHGTLKFVDLDGTIHFLGSLGLPPTIAVLMSIGEVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCHHHHHHHHHHHHH
GGLALIIGFLTPYVNVFYICVMLGSIFTLKLTRGYVSGYEFEIIHIVMNLACISSYSWKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
WLQFY
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377 [H]