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The map label for this gene is int

Identifier: 151220475

GI number: 151220475

Start: 320846

End: 322051

Strand: Reverse

Name: int

Synonym: NWMN_0263

Alternate gene names: 151220475

Gene position: 322051-320846 (Counterclockwise)

Preceding gene: 151220476

Following gene: 151220473

Centisome position: 11.19

GC content: 31.92

Gene sequence:

>1206_bases
ATGTGGTTTGAAAAATTTAAAAATAAGAACAATGAAACGAAGTATAGATACTACGAGAAATACAAAGATCCGTATACAGA
TAAATGGAAACGTGTAAGTGTTGTCTTGAATAAGAATACAAAGCAATCGCAAAAAGAGGCAATGTTTCGTTTAGAAGAAA
AAATAAAAGAAAAACTAAACAACAAGTCGTCAAGCGAATTAAAAACTTTGACTTTTCACGCGTTATTAGATGAATGGCTT
GAATATCATATAAAAACATCTGGCTTTAAAGTAACGACGCTTGATAATTTGAAAACAAGAATCAAAAACATCAAAAAGAA
CAGTTCTCAAAATTTACTTTTAAACAAAATTGATACAAAGTACATGCAAACATTTATTAACGAATTATCAAACGTATATT
CTGCAAATCAGGTAAAGCGTCAACTTGGACATATGAAAGAAGCTATTAAATACGCCGTTAAATTTTACAATTATCCAAAC
GAACACATATTAAATAGCGTCACACTACCAAAGAAGAGTAAGACGATAGAAGATATAGAAAAAGAAGAAGCGAAAATGTA
CAACTATTTAGAGATGGAACAGGTAATACAGATACGCGATTTTATACTGAACGATAATAACATGCAGTATAGAGCTCGTA
TTTTAGTTGCTGGGGCTGTAGAAGTTCAAGCTTTAACAGGTATGCGCATAGGTGAGTTATTAGCTCTCCAAGTTAAAGAT
GTTGACCTCAAAAATAAAACGATCGCTATTAATGGCACTATTCACAGAATCAAATGTAATGCTGGATTTGGTCACAAAGA
TACTACGAAGACCGCAGGTTCAAAAAGAAAAATCGCCATCAATTCAAGGATAGCAAATGTATTGAAAAAAATAATGTTAG
AAAATAAAAAGATGCAACAATGGGAACCAAGCTATGTTGATAGAGGGTTTATATTCACAACTTGCCAAGGAAATCCTATG
CAAGGCAGTAGGATAAACAAACGATTGTCCTCAGCTGCAGAATCATTAAATATAAATAAAAAAGTTACTACTCACACACT
AAGGCATACACACATAAGTTTATTGGCGGAAATGAATATATCGTTAAAAGCAATTATGAAAAGAGTAGGACATAGAGATG
AAAAAACGACTATAAAGGTGTATACACATGTAACAGAGAAAATGGACAGAGAGTTAGAGCAAAAATTAGAAAAACTTGTG
TACTAA

Upstream 100 bases:

>100_bases
ACTTTTTATTTTATTATATCACATTTAGTAGCTAGTACTAAAATCACGGGTAGCCCGCCTACCCTTATTATTTTTTGCCA
ATTTTGAGGAGGGATGTAAA

Downstream 100 bases:

>100_bases
AAGGTATCTGCCCTTTTTCTGCCCTTTTTTATTTTTAAAGACGCTACAAATCCTTTGTAACAACTGATATTAAAGGCTTT
TTAACACAAGTTAATCCCAT

Product: integrase

Products: NA

Alternate protein names: Int-TnX [H]

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MWFEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEEKIKEKLNNKSSSELKTLTFHALLDEWL
EYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTKYMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPN
EHILNSVTLPKKSKTIEDIEKEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD
VDLKNKTIAINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQWEPSYVDRGFIFTTCQGNPM
QGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNISLKAIMKRVGHRDEKTTIKVYTHVTEKMDRELEQKLEKLV
Y

Sequences:

>Translated_401_residues
MWFEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEEKIKEKLNNKSSSELKTLTFHALLDEWL
EYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTKYMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPN
EHILNSVTLPKKSKTIEDIEKEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD
VDLKNKTIAINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQWEPSYVDRGFIFTTCQGNPM
QGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNISLKAIMKRVGHRDEKTTIKVYTHVTEKMDRELEQKLEKLV
Y
>Mature_401_residues
MWFEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEEKIKEKLNNKSSSELKTLTFHALLDEWL
EYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTKYMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPN
EHILNSVTLPKKSKTIEDIEKEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD
VDLKNKTIAINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQWEPSYVDRGFIFTTCQGNPM
QGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNISLKAIMKRVGHRDEKTTIKVYTHVTEKMDRELEQKLEKLV
Y

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerc Binding Sites By A Short Central Region, Forming

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46985; Mature: 46985

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEEKIKEKLN
CCCHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
NKSSSELKTLTFHALLDEWLEYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHH
YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHH
KEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEHHHHCCCCHHHEEEEEEEC
VDLKNKTIAINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
CCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHC
WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
SLKAIMKRVGHRDEKTTIKVYTHVTEKMDRELEQKLEKLVY
HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWFEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEEKIKEKLN
CCCHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
NKSSSELKTLTFHALLDEWLEYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHH
YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHH
KEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEHHHHCCCCHHHEEEEEEEC
VDLKNKTIAINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
CCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHC
WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
SLKAIMKRVGHRDEKTTIKVYTHVTEKMDRELEQKLEKLVY
HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10532372; 11337471 [H]