| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is nifK [H]
Identifier: 150401852
GI number: 150401852
Start: 1484193
End: 1485611
Strand: Reverse
Name: nifK [H]
Synonym: Maeo_1430
Alternate gene names: 150401852
Gene position: 1485611-1484193 (Counterclockwise)
Preceding gene: 150401853
Following gene: 150401851
Centisome position: 94.66
GC content: 36.58
Gene sequence:
>1419_bases ATGAGTGACCATACAGAATGTAGCAATTGCGGCGAAATAAACTACATGAAAAAAACAAGGAAAAGTACCATAAACCCAAA TAAAATATGTCAGCCAATTGGGGCAATGTGGGCAACATTGGGAGTTTGCGAAGGCGTCCCATTTGTTCAAGGTGGTCAAG GTTGCACAACTTATGCAAGATATCAATTTGCAAGACATTTTAGAGAACCATCACCCATTGCATCTGCATCATTTCACGAA CATGCTGCGGTATATGGGGGAATGAAAAACCTGGTTGATGGATTAACAAACCTTGTATCAAGATATGATCCAAACCTAAT AGCCGTAATTACAACATGCTCCTCTGAAACAATTGGAGACGATATTGAATCATTTATTAGGGCTGCAAGAAAAAATATTG CAAAGGAAGTTGGAGAAGAAAAAGCAGAATTACCAATTATTCCAGTTCACTGTCCAGCATATAAAGGAAGTCATGCAACA GGATATGACAATGCTTCAAAAGCATATTTCCAATATTTGGCTAAAAAAGACCCAGAAGTTGAACCACATAAAATAAATAT CATATCTGGATTTGGAACTAACCCCGGAGATATATTGGAAATAAAAAGAATGCTTAAAATGATGGGCTTAGAGGAAGGAA AAGATTTCTCAATCATATTCGATATTAGTGAAAATCTTTACAAACCTTTGAGAGAACCTCTTGATGAAGTGCCATATTAC CCAGACGCTGGAACTACCATTGAAGAATTTGTAGATGCTGGAAATGGTAAGGCAACTTTTGCATTATGTCAATCCGCAGG AGGGGCTGGTGCCTTATTCTTAAAAAAGAAATTTAAAATACCTGATTTCTATGGACAACCAATTGGAGTTAAAAATACAG ATGAATTTTTAATAAATGTAGCCCAACTTACAGGCAAAGGAATACCTGATGAGCTCCTTGATGAAAGAGGTAAATTAATA GATGCTATTGCCGATACAGTCCACTATACAATGGATAAAAAGGTAGGTATATTCGGAGACCCTGACCATGTAATAGCTGT GGCAAGATTCTGCTGTGAAATTGGTATGAAACCTGTTGTAGTTAGCACCCAAACACCTTCAAGAATATATAAAAAAGAAA TGGAAAAAATTGCAAAAGAATTTAATGTGGATATTGAAGTTCAATTCTCTGACCTCTGGGACTTTGAAAAGAAAGTAAAA GAAATAGGAGTAGATTTAATTATTGGACACCCAAGAGGGGGAACTGCAATAGCAAAAGATATGGGAATAGGACTTTTAAG AACTGGATTCCCAGTATATGATAGAGTCGGATATTCCAGATGGCCAATAATGGGATACATGGGGAGTTTAAGATTCTTTG ATGAGCTTGTAAATACTATATTAAGTACTAGTGTGCCAGAGACTCGACTCCAACAGTAA
Upstream 100 bases:
>100_bases TTGTCAATTTTGCAAGAGATATTTATAAAGCGGTTTGTCATCCAATTTGGAATACAATACATGAAAAAGAGGACAAATTT GAAGAATATAAGGTGAAATA
Downstream 100 bases:
>100_bases GTTGAAAAATATAGATATAGTTAATCTTCGGACAATTTCATTACTATTCAATACACAAATCGTTATTTGTATTAACTAGG GAAATTCGTTCAAAGTTTGG
Product: nitrogenase
Products: NA
Alternate protein names: Dinitrogenase; Nitrogenase component I [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSDHTECSNCGEINYMKKTRKSTINPNKICQPIGAMWATLGVCEGVPFVQGGQGCTTYARYQFARHFREPSPIASASFHE HAAVYGGMKNLVDGLTNLVSRYDPNLIAVITTCSSETIGDDIESFIRAARKNIAKEVGEEKAELPIIPVHCPAYKGSHAT GYDNASKAYFQYLAKKDPEVEPHKINIISGFGTNPGDILEIKRMLKMMGLEEGKDFSIIFDISENLYKPLREPLDEVPYY PDAGTTIEEFVDAGNGKATFALCQSAGGAGALFLKKKFKIPDFYGQPIGVKNTDEFLINVAQLTGKGIPDELLDERGKLI DAIADTVHYTMDKKVGIFGDPDHVIAVARFCCEIGMKPVVVSTQTPSRIYKKEMEKIAKEFNVDIEVQFSDLWDFEKKVK EIGVDLIIGHPRGGTAIAKDMGIGLLRTGFPVYDRVGYSRWPIMGYMGSLRFFDELVNTILSTSVPETRLQQ
Sequences:
>Translated_472_residues MSDHTECSNCGEINYMKKTRKSTINPNKICQPIGAMWATLGVCEGVPFVQGGQGCTTYARYQFARHFREPSPIASASFHE HAAVYGGMKNLVDGLTNLVSRYDPNLIAVITTCSSETIGDDIESFIRAARKNIAKEVGEEKAELPIIPVHCPAYKGSHAT GYDNASKAYFQYLAKKDPEVEPHKINIISGFGTNPGDILEIKRMLKMMGLEEGKDFSIIFDISENLYKPLREPLDEVPYY PDAGTTIEEFVDAGNGKATFALCQSAGGAGALFLKKKFKIPDFYGQPIGVKNTDEFLINVAQLTGKGIPDELLDERGKLI DAIADTVHYTMDKKVGIFGDPDHVIAVARFCCEIGMKPVVVSTQTPSRIYKKEMEKIAKEFNVDIEVQFSDLWDFEKKVK EIGVDLIIGHPRGGTAIAKDMGIGLLRTGFPVYDRVGYSRWPIMGYMGSLRFFDELVNTILSTSVPETRLQQ >Mature_471_residues SDHTECSNCGEINYMKKTRKSTINPNKICQPIGAMWATLGVCEGVPFVQGGQGCTTYARYQFARHFREPSPIASASFHEH AAVYGGMKNLVDGLTNLVSRYDPNLIAVITTCSSETIGDDIESFIRAARKNIAKEVGEEKAELPIIPVHCPAYKGSHATG YDNASKAYFQYLAKKDPEVEPHKINIISGFGTNPGDILEIKRMLKMMGLEEGKDFSIIFDISENLYKPLREPLDEVPYYP DAGTTIEEFVDAGNGKATFALCQSAGGAGALFLKKKFKIPDFYGQPIGVKNTDEFLINVAQLTGKGIPDELLDERGKLID AIADTVHYTMDKKVGIFGDPDHVIAVARFCCEIGMKPVVVSTQTPSRIYKKEMEKIAKEFNVDIEVQFSDLWDFEKKVKE IGVDLIIGHPRGGTAIAKDMGIGLLRTGFPVYDRVGYSRWPIMGYMGSLRFFDELVNTILSTSVPETRLQQ
Specific function: This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation [H]
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nifD/nifK/nifE/nifN family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000510 - InterPro: IPR000318 [H]
Pfam domain/function: PF00148 Oxidored_nitro [H]
EC number: =1.18.6.1 [H]
Molecular weight: Translated: 52260; Mature: 52129
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00090 NITROGENASE_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHTECSNCGEINYMKKTRKSTINPNKICQPIGAMWATLGVCEGVPFVQGGQGCTTYAR CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH YQFARHFREPSPIASASFHEHAAVYGGMKNLVDGLTNLVSRYDPNLIAVITTCSSETIGD HHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH DIESFIRAARKNIAKEVGEEKAELPIIPVHCPAYKGSHATGYDNASKAYFQYLAKKDPEV HHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCC EPHKINIISGFGTNPGDILEIKRMLKMMGLEEGKDFSIIFDISENLYKPLREPLDEVPYY CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCC PDAGTTIEEFVDAGNGKATFALCQSAGGAGALFLKKKFKIPDFYGQPIGVKNTDEFLINV CCCCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEHCCCCCCCCCCCCCCCCHHHHHHHH AQLTGKGIPDELLDERGKLIDAIADTVHYTMDKKVGIFGDPDHVIAVARFCCEIGMKPVV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEE VSTQTPSRIYKKEMEKIAKEFNVDIEVQFSDLWDFEKKVKEIGVDLIIGHPRGGTAIAKD EECCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH MGIGLLRTGFPVYDRVGYSRWPIMGYMGSLRFFDELVNTILSTSVPETRLQQ HCCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure SDHTECSNCGEINYMKKTRKSTINPNKICQPIGAMWATLGVCEGVPFVQGGQGCTTYAR CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH YQFARHFREPSPIASASFHEHAAVYGGMKNLVDGLTNLVSRYDPNLIAVITTCSSETIGD HHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH DIESFIRAARKNIAKEVGEEKAELPIIPVHCPAYKGSHATGYDNASKAYFQYLAKKDPEV HHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCC EPHKINIISGFGTNPGDILEIKRMLKMMGLEEGKDFSIIFDISENLYKPLREPLDEVPYY CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCC PDAGTTIEEFVDAGNGKATFALCQSAGGAGALFLKKKFKIPDFYGQPIGVKNTDEFLINV CCCCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEHCCCCCCCCCCCCCCCCHHHHHHHH AQLTGKGIPDELLDERGKLIDAIADTVHYTMDKKVGIFGDPDHVIAVARFCCEIGMKPVV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEE VSTQTPSRIYKKEMEKIAKEFNVDIEVQFSDLWDFEKKVKEIGVDLIIGHPRGGTAIAKD EECCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH MGIGLLRTGFPVYDRVGYSRWPIMGYMGSLRFFDELVNTILSTSVPETRLQQ HCCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8990309 [H]