Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 150401758

GI number: 150401758

Start: 1397344

End: 1398531

Strand: Reverse

Name: ybjZ [C]

Synonym: Maeo_1336

Alternate gene names: 150401758

Gene position: 1398531-1397344 (Counterclockwise)

Preceding gene: 150401760

Following gene: 150401757

Centisome position: 89.11

GC content: 31.99

Gene sequence:

>1188_bases
ATGAAACCATTAGATATAATTTCGTTTGCATTTAATAATATAAAACAAAAAAAAACTCAAAGTATGCTTACTATGATGGG
AATTGTCATAGGGATTTTTGCTATTGTTAGTTTAGTATCTATTGGATATGGTGTTGAAGAATATATGCACGGCGAAATGA
TGAAAATGGGGGGAAATAAATTAACAATATTGCCAATTAAACAATTTGGTATTCCTCCCACTCATTTTTTTACAGATAAA
GATATTAAGGCAATTCACAATATTAGGGGAGTGGATTCCGTGGTATATGGTTGGTACGGTGGAACAGATATTGAATATAA
TAACGAAAAAAAATATGTTGGTTATTTCTACGGAGCTCCAAACAATATTAAAAAAGTATATTCTGAAACAGGATATAATA
TTGAAGAAGGTAGATGGTTATCCAACAGTGATACATATAAATGCAATATAGGATATGGTGTAGCCCATAGCCTATTTAAT
AAAAATGTAAAAATAGGAGATAGAATAATTGTAAAGGACAAAAAATTTAAAGTAGTTGGAATTATGGGGCAGGTTGGAAA
CCAGCAAGATGATAATATAATTATGATTCCAATTTCTGTGGGAGAAAACATTTTTGACAAGAAAAATGAATATAACTTTA
TCACCGTTGTAGTTAAAGATGGTGCAGATATGGCAAAAATATCAAACGAAATATCAAACAAACTTGAAAAATCATTCGGA
GATACTGAATTTTCAGTTCTTTCGGCTGAACAGTTGGCTGAAACCATTGGTGGCGTATTAAGCGTTTTGACATTATTTAT
ATCAGGAGTTGCAGGAATATCTTTATTGGTGGGGGCTGTTGGTATATCCAACACCACTCATATGAGCATATTACAAAGAA
AAAAAGATATCGGAATATTAAAATCACTTGGTGCAGAGACTACGGACATATTGGCAATTTTTATTGTAGAATCTGGATTT
TTAGGATTATTTGGTGGGATAGTTGGAATTATATTTGGAATAATTGCGGCAAAAATTATTGAAAATATCGCCCATGCCTC
TGGTTATTTAATGGTTAATGCATGGATATCTTGGGAATTAATAGTTGGTGTTTTGATATTTTCATTTATGATGGGAGTAA
TAAGCGGATATTTACCTGCACGAAGTGGGGCAAAACTTAATCCCATTGATACATTACGGGGCGAATAA

Upstream 100 bases:

>100_bases
AATATTATATATATTTATAGTTATTAATATATTCTATTATATTAATAATAATAATAATAATAATAATATGTCGAAATAAT
CTAATATATCGGGGCTAATT

Downstream 100 bases:

>100_bases
AATGGGGCAAAACGAAAATAAAATAGAAAATAAAATAGAAAAAAAAGAATTAATTGAAGCTAAAAATATATGGAAAATAT
ATGGGGGAGGAGAGGCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKPLDIISFAFNNIKQKKTQSMLTMMGIVIGIFAIVSLVSIGYGVEEYMHGEMMKMGGNKLTILPIKQFGIPPTHFFTDK
DIKAIHNIRGVDSVVYGWYGGTDIEYNNEKKYVGYFYGAPNNIKKVYSETGYNIEEGRWLSNSDTYKCNIGYGVAHSLFN
KNVKIGDRIIVKDKKFKVVGIMGQVGNQQDDNIIMIPISVGENIFDKKNEYNFITVVVKDGADMAKISNEISNKLEKSFG
DTEFSVLSAEQLAETIGGVLSVLTLFISGVAGISLLVGAVGISNTTHMSILQRKKDIGILKSLGAETTDILAIFIVESGF
LGLFGGIVGIIFGIIAAKIIENIAHASGYLMVNAWISWELIVGVLIFSFMMGVISGYLPARSGAKLNPIDTLRGE

Sequences:

>Translated_395_residues
MKPLDIISFAFNNIKQKKTQSMLTMMGIVIGIFAIVSLVSIGYGVEEYMHGEMMKMGGNKLTILPIKQFGIPPTHFFTDK
DIKAIHNIRGVDSVVYGWYGGTDIEYNNEKKYVGYFYGAPNNIKKVYSETGYNIEEGRWLSNSDTYKCNIGYGVAHSLFN
KNVKIGDRIIVKDKKFKVVGIMGQVGNQQDDNIIMIPISVGENIFDKKNEYNFITVVVKDGADMAKISNEISNKLEKSFG
DTEFSVLSAEQLAETIGGVLSVLTLFISGVAGISLLVGAVGISNTTHMSILQRKKDIGILKSLGAETTDILAIFIVESGF
LGLFGGIVGIIFGIIAAKIIENIAHASGYLMVNAWISWELIVGVLIFSFMMGVISGYLPARSGAKLNPIDTLRGE
>Mature_395_residues
MKPLDIISFAFNNIKQKKTQSMLTMMGIVIGIFAIVSLVSIGYGVEEYMHGEMMKMGGNKLTILPIKQFGIPPTHFFTDK
DIKAIHNIRGVDSVVYGWYGGTDIEYNNEKKYVGYFYGAPNNIKKVYSETGYNIEEGRWLSNSDTYKCNIGYGVAHSLFN
KNVKIGDRIIVKDKKFKVVGIMGQVGNQQDDNIIMIPISVGENIFDKKNEYNFITVVVKDGADMAKISNEISNKLEKSFG
DTEFSVLSAEQLAETIGGVLSVLTLFISGVAGISLLVGAVGISNTTHMSILQRKKDIGILKSLGAETTDILAIFIVESGF
LGLFGGIVGIIFGIIAAKIIENIAHASGYLMVNAWISWELIVGVLIFSFMMGVISGYLPARSGAKLNPIDTLRGE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=405, Percent_Identity=25.9259259259259, Blast_Score=118, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43223; Mature: 43223

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLDIISFAFNNIKQKKTQSMLTMMGIVIGIFAIVSLVSIGYGVEEYMHGEMMKMGGNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCE
LTILPIKQFGIPPTHFFTDKDIKAIHNIRGVDSVVYGWYGGTDIEYNNEKKYVGYFYGAP
EEEEEEHHHCCCCCCCCCCCHHHHHHHHCCCCHHEEECCCCCCCEECCCCCEEEEEECCC
NNIKKVYSETGYNIEEGRWLSNSDTYKCNIGYGVAHSLFNKNVKIGDRIIVKDKKFKVVG
HHHHHHHHHCCCCCCCCEEECCCCCEEEECCHHHHHHHHCCCCCCCCEEEEECCCEEEEE
IMGQVGNQQDDNIIMIPISVGENIFDKKNEYNFITVVVKDGADMAKISNEISNKLEKSFG
EEECCCCCCCCCEEEEEEECCCCHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC
DTEFSVLSAEQLAETIGGVLSVLTLFISGVAGISLLVGAVGISNTTHMSILQRKKDIGIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KSLGAETTDILAIFIVESGFLGLFGGIVGIIFGIIAAKIIENIAHASGYLMVNAWISWEL
HHCCCCHHHHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHH
IVGVLIFSFMMGVISGYLPARSGAKLNPIDTLRGE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MKPLDIISFAFNNIKQKKTQSMLTMMGIVIGIFAIVSLVSIGYGVEEYMHGEMMKMGGNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCE
LTILPIKQFGIPPTHFFTDKDIKAIHNIRGVDSVVYGWYGGTDIEYNNEKKYVGYFYGAP
EEEEEEHHHCCCCCCCCCCCHHHHHHHHCCCCHHEEECCCCCCCEECCCCCEEEEEECCC
NNIKKVYSETGYNIEEGRWLSNSDTYKCNIGYGVAHSLFNKNVKIGDRIIVKDKKFKVVG
HHHHHHHHHCCCCCCCCEEECCCCCEEEECCHHHHHHHHCCCCCCCCEEEEECCCEEEEE
IMGQVGNQQDDNIIMIPISVGENIFDKKNEYNFITVVVKDGADMAKISNEISNKLEKSFG
EEECCCCCCCCCEEEEEEECCCCHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC
DTEFSVLSAEQLAETIGGVLSVLTLFISGVAGISLLVGAVGISNTTHMSILQRKKDIGIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KSLGAETTDILAIFIVESGFLGLFGGIVGIIFGIIAAKIIENIAHASGYLMVNAWISWEL
HHCCCCHHHHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHH
IVGVLIFSFMMGVISGYLPARSGAKLNPIDTLRGE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]