| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is pcm
Identifier: 150401739
GI number: 150401739
Start: 1380070
End: 1380720
Strand: Reverse
Name: pcm
Synonym: Maeo_1317
Alternate gene names: 150401739
Gene position: 1380720-1380070 (Counterclockwise)
Preceding gene: 150401740
Following gene: 150401738
Centisome position: 87.97
GC content: 34.41
Gene sequence:
>651_bases ATGACAATAAAAAAAATGGAAGCAATTGTTAAAGGATTAATAAACGCAGGATATTTAAAAAATAAAATGGTTTCAAAAGC ACTTTTAACAGTTCCAAGGCATGAATTTATTCCTGCGGAGCTCCATGATTATGCATATGTTGACACACCATTAAATATCG GGCATGGTCAAACAATTTCAGCAATTCATATGGTTGCCATAATATGTGATGCCCTTGATTTAAAAGAAGGCGATAAAGTT CTTGAAATTGGAACGGGCTCTGGCTATCATGCCGCAGTCGTTGCTGAAATTGTCGGAAAAAATGGGCAGGTAATTACAAT AGAAAGAATTCCAGAACTTGCCGAAAAAGCTGAAAGTACATTAAAAAAACTGGGATATACAAATGTTAAGGTAATTTGTG GTAATGGAACTTTGGGGAGCTCCGAGTTTGCACCATATGATAAAATATATCTGACTGCATCGGGACCCGACATACCTAAC TCATTAATTGAACAGTTGAAAAAAGGGGGAAAATTGGTGGCACCTGTTGGTCTATATATTCAAGATTTAATATTATTGGA AAAAAAGAATGGAAATATAATTAAAAAAAATTTGGGTGCTGTTGCATTTGTTCCACTCATAGGTAAAAATGGATGGCATA ATGAATATTAA
Upstream 100 bases:
>100_bases ATCTTGCAATAGTAAAAGAAGATAAAAAGAAAATAGAAAGAAGAGATAGAAAATAATATTAATATATATAATATCTATAA TCTAAAAGAGAGTATATATT
Downstream 100 bases:
>100_bases TTTTCGATAATATTAAATATATAAAAAATATATTAAAAACATATTAAAAGTCATAATTAATAAGGTGTGTTTATATGCTG TGTGTTAGGGGCTATTTATA
Product: protein-L-isoaspartate O-methyltransferase
Products: NA
Alternate protein names: L-isoaspartyl protein carboxyl methyltransferase; Protein L-isoaspartyl methyltransferase; Protein-beta-aspartate methyltransferase; PIMT
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTIKKMEAIVKGLINAGYLKNKMVSKALLTVPRHEFIPAELHDYAYVDTPLNIGHGQTISAIHMVAIICDALDLKEGDKV LEIGTGSGYHAAVVAEIVGKNGQVITIERIPELAEKAESTLKKLGYTNVKVICGNGTLGSSEFAPYDKIYLTASGPDIPN SLIEQLKKGGKLVAPVGLYIQDLILLEKKNGNIIKKNLGAVAFVPLIGKNGWHNEY
Sequences:
>Translated_216_residues MTIKKMEAIVKGLINAGYLKNKMVSKALLTVPRHEFIPAELHDYAYVDTPLNIGHGQTISAIHMVAIICDALDLKEGDKV LEIGTGSGYHAAVVAEIVGKNGQVITIERIPELAEKAESTLKKLGYTNVKVICGNGTLGSSEFAPYDKIYLTASGPDIPN SLIEQLKKGGKLVAPVGLYIQDLILLEKKNGNIIKKNLGAVAFVPLIGKNGWHNEY >Mature_215_residues TIKKMEAIVKGLINAGYLKNKMVSKALLTVPRHEFIPAELHDYAYVDTPLNIGHGQTISAIHMVAIICDALDLKEGDKVL EIGTGSGYHAAVVAEIVGKNGQVITIERIPELAEKAESTLKKLGYTNVKVICGNGTLGSSEFAPYDKIYLTASGPDIPNS LIEQLKKGGKLVAPVGLYIQDLILLEKKNGNIIKKNLGAVAFVPLIGKNGWHNEY
Specific function: Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins
COG id: COG2518
COG function: function code O; Protein-L-isoaspartate carboxylmethyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. L- isoaspartyl/D-aspartyl protein methyltransferase family
Homologues:
Organism=Homo sapiens, GI226530908, Length=212, Percent_Identity=35.377358490566, Blast_Score=114, Evalue=6e-26, Organism=Escherichia coli, GI1789100, Length=207, Percent_Identity=39.1304347826087, Blast_Score=139, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71983477, Length=210, Percent_Identity=34.7619047619048, Blast_Score=114, Evalue=3e-26, Organism=Caenorhabditis elegans, GI193207222, Length=208, Percent_Identity=32.6923076923077, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI17981723, Length=217, Percent_Identity=31.7972350230415, Blast_Score=97, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PIMT_META3 (A6UWM1)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325505.1 - ProteinModelPortal: A6UWM1 - SMR: A6UWM1 - STRING: A6UWM1 - GeneID: 5327324 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_1317 - eggNOG: arNOG08853 - HOGENOM: HBG699907 - OMA: GYHAAVV - ProtClustDB: PRK13942 - BioCyc: MAEO419665:MAEO_1317-MONOMER - GO: GO:0005737 - HAMAP: MF_00090 - InterPro: IPR000682 - PANTHER: PTHR11579 - TIGRFAMs: TIGR00080
Pfam domain/function: PF01135 PCMT
EC number: =2.1.1.77
Molecular weight: Translated: 23319; Mature: 23187
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS01279 PCMT
Important sites: ACT_SITE 60-60
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKKMEAIVKGLINAGYLKNKMVSKALLTVPRHEFIPAELHDYAYVDTPLNIGHGQTIS CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHCCCEEECCCCCCCCCCHHH AIHMVAIICDALDLKEGDKVLEIGTGSGYHAAVVAEIVGKNGQVITIERIPELAEKAEST HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH LKKLGYTNVKVICGNGTLGSSEFAPYDKIYLTASGPDIPNSLIEQLKKGGKLVAPVGLYI HHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEHHHHHH QDLILLEKKNGNIIKKNLGAVAFVPLIGKNGWHNEY HHHHEEECCCCCEEEECCCEEEEEEEECCCCCCCCC >Mature Secondary Structure TIKKMEAIVKGLINAGYLKNKMVSKALLTVPRHEFIPAELHDYAYVDTPLNIGHGQTIS CHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHCCCEEECCCCCCCCCCHHH AIHMVAIICDALDLKEGDKVLEIGTGSGYHAAVVAEIVGKNGQVITIERIPELAEKAEST HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH LKKLGYTNVKVICGNGTLGSSEFAPYDKIYLTASGPDIPNSLIEQLKKGGKLVAPVGLYI HHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEHHHHHH QDLILLEKKNGNIIKKNLGAVAFVPLIGKNGWHNEY HHHHEEECCCCCEEEECCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA