Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401606

Identifier: 150401606

GI number: 150401606

Start: 1248992

End: 1249873

Strand: Reverse

Name: 150401606

Synonym: Maeo_1183

Alternate gene names: NA

Gene position: 1249873-1248992 (Counterclockwise)

Preceding gene: 150401610

Following gene: 150401604

Centisome position: 79.64

GC content: 27.1

Gene sequence:

>882_bases
ATGAATAAACTAACCACCACAATAGGAATAAATTACAATGGAGCTCCCATAACAGAACGACAGATAAGAATACTTAGATT
AATCTCTGAAAAAAAATCCCAAAATAAAGTTGCGGAGCTCCTCAGTATTCCCCCTTCCGCAGTGAATATACAGATAAAAC
GGCTTGAAAAAAAACTTGGGGTGCAATTAATATACTCCTCTACATATGGAACAATACTAACAGAAACTGCCCAAGAAATA
GTAAAATACTACGAATTAAGAAAAAAAAGAATATCTTCCGATAAATTCATTGGTTGCGGATATATAAGTGGGGAAATTGG
AAAAATATTATTTGATAATATAATTATTTCATCTTTTGATAACATATTAAAGTTATATAAAATGGATTTGCTGTCTATTA
TTGGCATAGATGACCCCTATTGGAGTATGGATTTTGGAGTTTCAAAATTCCAAAGGAGTTTTTACGACCCCATACCTGTG
GCTTATGATTATTTTATTAAGGTGCATAGTCCAAAATATGAATTTAATCATAATAATTTAATAGGCATAAGATATTCCCC
TCAACGCATAATTTGGAATATTTTAAAAAGTGAGAATATAACCCATAAAATCACAAAAACTGTGAAAAATCCATTTTATG
CCCTTGATTTGGTTGAAAAAGGATATAGTTTATATATAAATAAATGTTTTGAACAATACATTAAAAAAGAATATATTGTA
GAAAAACCATATTTTTACGATAAAACCAAACATACAATAAATATTATACCCCTATATGATGAAAATAATAAAAATGTAGA
ACATAAAAATATTGAAGAAATAATATTCAAAAAGAAAAAAGAATTGAAAAATAAAGGATTTGAATTAGTAGATTATTATT
AA

Upstream 100 bases:

>100_bases
CATATATTTAAATAATAAATTTTATAGATTCCCTGCTATTATATTTCTTAAATAATACAATAACAAATATTATATATAAT
ACATACGCAAAAATTAGAGT

Downstream 100 bases:

>100_bases
ATCTTGTAATTATTCGGGTATATTGCCTCCTGGAACCATTACATTTAATTTAACCTGTTTTACTCCTTTTTGAGAAGTTA
ATCTATCAGTTAATTCCCTT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNKLTTTIGINYNGAPITERQIRILRLISEKKSQNKVAELLSIPPSAVNIQIKRLEKKLGVQLIYSSTYGTILTETAQEI
VKYYELRKKRISSDKFIGCGYISGEIGKILFDNIIISSFDNILKLYKMDLLSIIGIDDPYWSMDFGVSKFQRSFYDPIPV
AYDYFIKVHSPKYEFNHNNLIGIRYSPQRIIWNILKSENITHKITKTVKNPFYALDLVEKGYSLYINKCFEQYIKKEYIV
EKPYFYDKTKHTINIIPLYDENNKNVEHKNIEEIIFKKKKELKNKGFELVDYY

Sequences:

>Translated_293_residues
MNKLTTTIGINYNGAPITERQIRILRLISEKKSQNKVAELLSIPPSAVNIQIKRLEKKLGVQLIYSSTYGTILTETAQEI
VKYYELRKKRISSDKFIGCGYISGEIGKILFDNIIISSFDNILKLYKMDLLSIIGIDDPYWSMDFGVSKFQRSFYDPIPV
AYDYFIKVHSPKYEFNHNNLIGIRYSPQRIIWNILKSENITHKITKTVKNPFYALDLVEKGYSLYINKCFEQYIKKEYIV
EKPYFYDKTKHTINIIPLYDENNKNVEHKNIEEIIFKKKKELKNKGFELVDYY
>Mature_293_residues
MNKLTTTIGINYNGAPITERQIRILRLISEKKSQNKVAELLSIPPSAVNIQIKRLEKKLGVQLIYSSTYGTILTETAQEI
VKYYELRKKRISSDKFIGCGYISGEIGKILFDNIIISSFDNILKLYKMDLLSIIGIDDPYWSMDFGVSKFQRSFYDPIPV
AYDYFIKVHSPKYEFNHNNLIGIRYSPQRIIWNILKSENITHKITKTVKNPFYALDLVEKGYSLYINKCFEQYIKKEYIV
EKPYFYDKTKHTINIIPLYDENNKNVEHKNIEEIIFKKKKELKNKGFELVDYY

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1 [H]

EC number: NA

Molecular weight: Translated: 34499; Mature: 34499

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLTTTIGINYNGAPITERQIRILRLISEKKSQNKVAELLSIPPSAVNIQIKRLEKKLG
CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
VQLIYSSTYGTILTETAQEIVKYYELRKKRISSDKFIGCGYISGEIGKILFDNIIISSFD
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
NILKLYKMDLLSIIGIDDPYWSMDFGVSKFQRSFYDPIPVAYDYFIKVHSPKYEFNHNNL
HHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHCCCCCCEEEEEEEEECCCEEECCCCE
IGIRYSPQRIIWNILKSENITHKITKTVKNPFYALDLVEKGYSLYINKCFEQYIKKEYIV
EEEEECHHHHHHHHHHCCCCHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHEE
EKPYFYDKTKHTINIIPLYDENNKNVEHKNIEEIIFKKKKELKNKGFELVDYY
CCCCEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MNKLTTTIGINYNGAPITERQIRILRLISEKKSQNKVAELLSIPPSAVNIQIKRLEKKLG
CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
VQLIYSSTYGTILTETAQEIVKYYELRKKRISSDKFIGCGYISGEIGKILFDNIIISSFD
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
NILKLYKMDLLSIIGIDDPYWSMDFGVSKFQRSFYDPIPVAYDYFIKVHSPKYEFNHNNL
HHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHCCCCCCEEEEEEEEECCCEEECCCCE
IGIRYSPQRIIWNILKSENITHKITKTVKNPFYALDLVEKGYSLYINKCFEQYIKKEYIV
EEEEECHHHHHHHHHHCCCCHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHEE
EKPYFYDKTKHTINIIPLYDENNKNVEHKNIEEIIFKKKKELKNKGFELVDYY
CCCCEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]