| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401478
Identifier: 150401478
GI number: 150401478
Start: 1089028
End: 1089534
Strand: Direct
Name: 150401478
Synonym: Maeo_1054
Alternate gene names: NA
Gene position: 1089028-1089534 (Clockwise)
Preceding gene: 150401477
Following gene: 150401479
Centisome position: 69.39
GC content: 27.42
Gene sequence:
>507_bases ATGAAAACCCCCCCTTATGTAAAAATATCGGAGCTCCAACAAAAATATAATTTAAAAAATGAAGAAAAAATATTTTTAGG AACTGATGGGAGCATTACCAATTTATTAGAGATATTATTTAACGATAAAGTAATTGTAAAGACCATTAGCCAAATGACCA TTGAGGATACATATTATAGAACTGTTATTTTGAAAATTAAAAACATTCCTATGATATATGCCACTTCAAAGATACCACTT AAAAATATAAAAAACAATGAATTGAGAGAAAATATATCAAAAGACCTACTATCTGCGGACATACCAATAGGCAAAATTCT AAAAATGCATAATTTAGAAACACGGCGAGAAATTAAAAATATAACCTATGATAGCATTGATAAAAATGTCCAACAATACC TTGAAACTACTAAAACGGAGCTCCCCCAAAGAACATACAACATAATTTATAAAAATAATATATTAATGGAATTAACTGAA ATATTTAATGTTGGGGAACATTTGTAG
Upstream 100 bases:
>100_bases TAATTCGTCCTTAATTATTTGGGACGATTAAGGAACATATAATGTCGATTCACTATAATCAAAGATTAGCTAATTTATAT AAAGATTTTTGCGTGTAAAT
Downstream 100 bases:
>100_bases TTATGTTGGGGAGCTTTTTACATCATGTCCCCATATTCTTAATATTTTATATCTTATTATTAAATATATTAAGATATGAT AAAACATTACAGAACATACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKTPPYVKISELQQKYNLKNEEKIFLGTDGSITNLLEILFNDKVIVKTISQMTIEDTYYRTVILKIKNIPMIYATSKIPL KNIKNNELRENISKDLLSADIPIGKILKMHNLETRREIKNITYDSIDKNVQQYLETTKTELPQRTYNIIYKNNILMELTE IFNVGEHL
Sequences:
>Translated_168_residues MKTPPYVKISELQQKYNLKNEEKIFLGTDGSITNLLEILFNDKVIVKTISQMTIEDTYYRTVILKIKNIPMIYATSKIPL KNIKNNELRENISKDLLSADIPIGKILKMHNLETRREIKNITYDSIDKNVQQYLETTKTELPQRTYNIIYKNNILMELTE IFNVGEHL >Mature_168_residues MKTPPYVKISELQQKYNLKNEEKIFLGTDGSITNLLEILFNDKVIVKTISQMTIEDTYYRTVILKIKNIPMIYATSKIPL KNIKNNELRENISKDLLSADIPIGKILKMHNLETRREIKNITYDSIDKNVQQYLETTKTELPQRTYNIIYKNNILMELTE IFNVGEHL
Specific function: Unknown
COG id: COG3161
COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate--pyruvate lyase type 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002800 [H]
Pfam domain/function: PF01947 DUF98 [H]
EC number: NA
Molecular weight: Translated: 19709; Mature: 19709
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPPYVKISELQQKYNLKNEEKIFLGTDGSITNLLEILFNDKVIVKTISQMTIEDTYYR CCCCCCEEHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHE TVILKIKNIPMIYATSKIPLKNIKNNELRENISKDLLSADIPIGKILKMHNLETRREIKN EEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH ITYDSIDKNVQQYLETTKTELPQRTYNIIYKNNILMELTEIFNVGEHL CCHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKTPPYVKISELQQKYNLKNEEKIFLGTDGSITNLLEILFNDKVIVKTISQMTIEDTYYR CCCCCCEEHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHE TVILKIKNIPMIYATSKIPLKNIKNNELRENISKDLLSADIPIGKILKMHNLETRREIKN EEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH ITYDSIDKNVQQYLETTKTELPQRTYNIIYKNNILMELTEIFNVGEHL CCHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]