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The map label for this gene is frhD [H]

Identifier: 150401468

GI number: 150401468

Start: 1076709

End: 1077257

Strand: Reverse

Name: frhD [H]

Synonym: Maeo_1044

Alternate gene names: 150401468

Gene position: 1077257-1076709 (Counterclockwise)

Preceding gene: 150401469

Following gene: 150401467

Centisome position: 68.64

GC content: 32.6

Gene sequence:

>549_bases
GTGAATAAATTGCCAAATACCGATGAAATAAATGAATTAGATTTGTCATTATCATATTATAAGGAAATAATGGTATTGGC
ATGTGGAAATATTTTATTTGCCGACGATGGATTTAGTGTTCATGTATTGGAAAAACTACAAGATTTATTAACTGAGGAGG
AGCGAGAATTTGTATCTTTGGTAGATGCAGGTGCCGGAGCTCCACAGCAAGTTTTATCTTTGATGGACGAAAATTCAGAA
ACAAAAAAAATCATTGTAGTTGATATAATCGATTATGGGCTAAATCCCGGAGAAATAAAAATTCTTGAAAAAGAATATTT
ACCAGACCCAGAACATACCAAATTAGATATTCACGACTGGCCATTATCAAGGGCATTACGGGAAGTATGCGATAAATATG
ACATTGAATTAAAAGTAGTAGGATGTCAGGCTAAATATGTTTCCGAACCCGATGTAGTTCTTGAATTAACAGAAGAAGTT
GCGGGTGCTGTTGATGATGCTGTTAACTGGATATTAAATGAAATTAGAAATAATAAAAATAAAAATTAA

Upstream 100 bases:

>100_bases
GACCCAAGCAAATTAAAATATAATATAATTTAACATTATTATACTCATTATTGTAAATTAAAAATATATTAATATTTAAT
AATCATTACTGGGAGATATT

Downstream 100 bases:

>100_bases
AATTTTTATTTATCATATATTTATTTATATATATATTATATCTATATTATATCTAATACATATATAACTCATATATCAAT
TATAACTCAAAGAGGAGGCG

Product: coenzyme F420-reducing hydrogenase delta subunit

Products: reduced coenzyme F420

Alternate protein names: Putative coenzyme F420 hydrogenase-processing subunit [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNKLPNTDEINELDLSLSYYKEIMVLACGNILFADDGFSVHVLEKLQDLLTEEEREFVSLVDAGAGAPQQVLSLMDENSE
TKKIIVVDIIDYGLNPGEIKILEKEYLPDPEHTKLDIHDWPLSRALREVCDKYDIELKVVGCQAKYVSEPDVVLELTEEV
AGAVDDAVNWILNEIRNNKNKN

Sequences:

>Translated_182_residues
MNKLPNTDEINELDLSLSYYKEIMVLACGNILFADDGFSVHVLEKLQDLLTEEEREFVSLVDAGAGAPQQVLSLMDENSE
TKKIIVVDIIDYGLNPGEIKILEKEYLPDPEHTKLDIHDWPLSRALREVCDKYDIELKVVGCQAKYVSEPDVVLELTEEV
AGAVDDAVNWILNEIRNNKNKN
>Mature_182_residues
MNKLPNTDEINELDLSLSYYKEIMVLACGNILFADDGFSVHVLEKLQDLLTEEEREFVSLVDAGAGAPQQVLSLMDENSE
TKKIIVVDIIDYGLNPGEIKILEKEYLPDPEHTKLDIHDWPLSRALREVCDKYDIELKVVGCQAKYVSEPDVVLELTEEV
AGAVDDAVNWILNEIRNNKNKN

Specific function: Protease Involved In The C-Terminal Processing Of Hyab, The Large Subunit Of Hydrogenase 1 (Potential). [C]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A31 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004411
- InterPro:   IPR000671 [H]

Pfam domain/function: PF01750 HycI [H]

EC number: 1.12.98.1

Molecular weight: Translated: 20575; Mature: 20575

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLPNTDEINELDLSLSYYKEIMVLACGNILFADDGFSVHVLEKLQDLLTEEEREFVSL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VDAGAGAPQQVLSLMDENSETKKIIVVDIIDYGLNPGEIKILEKEYLPDPEHTKLDIHDW
HHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEHHCCCCCCCCEEECCCC
PLSRALREVCDKYDIELKVVGCQAKYVSEPDVVLELTEEVAGAVDDAVNWILNEIRNNKN
CHHHHHHHHHHHCCCEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KN
CC
>Mature Secondary Structure
MNKLPNTDEINELDLSLSYYKEIMVLACGNILFADDGFSVHVLEKLQDLLTEEEREFVSL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VDAGAGAPQQVLSLMDENSETKKIIVVDIIDYGLNPGEIKILEKEYLPDPEHTKLDIHDW
HHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEHHCCCCCCCCEEECCCC
PLSRALREVCDKYDIELKVVGCQAKYVSEPDVVLELTEEVAGAVDDAVNWILNEIRNNKN
CHHHHHHHHHHHCCCEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2; coenzyme F420

Specific reaction: H2 + coenzyme F420 = reduced coenzyme F420

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]