| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401461
Identifier: 150401461
GI number: 150401461
Start: 1066155
End: 1066592
Strand: Reverse
Name: 150401461
Synonym: Maeo_1037
Alternate gene names: NA
Gene position: 1066592-1066155 (Counterclockwise)
Preceding gene: 150401463
Following gene: 150401456
Centisome position: 67.96
GC content: 31.74
Gene sequence:
>438_bases ATGGATAAACGAATAACCCTTATTGGAAGTAAAATAGCAAAAACTGGAAATGAATTTATTTATTGTGGTGTTTTGGAGGA ATGTTCTGAATGTAGGTTTAAAAAAATATGTCATGATGGTTTGATAGTCGGGAAAAGATATAGGATAGTTAGTGTTAGGT CTGCAAAGCATCCATGCATAGCATATGGGGACGGAGTTAAAGTTATTGAGGTAGAGCCCTCTAATAATTTTACAATACTT ATTGAATCAAAAAAGGCACTGGAGGGTTTAACCTTATCCCACAGCGATATTCAATGCAATAATATATTATGTAAATACTA TAATTTATGTCATTCCGAAGGAATGCCTGAAAAATATAAAATCATGGAGCTCCATGAAAAAATAAAATGTCCAAAAGGAA ATTCACTAATAAAAGCCACAGTATCTACTATCAATTAA
Upstream 100 bases:
>100_bases CTCAAACATCTTACATATATAATATCTTTTTATAATATATTTTGTAAATATTATTATTTATATTTATTATATTTATTATA TATTATGCCTTGGTGAGATT
Downstream 100 bases:
>100_bases TATTAAATTCCTTTTTTTAATATTTCTTGTATATTTCCAAATAATACGGAGCTCCCACAAAAGCTCGGAAGATATCGGGA AGCTTTACCAGAATTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MDKRITLIGSKIAKTGNEFIYCGVLEECSECRFKKICHDGLIVGKRYRIVSVRSAKHPCIAYGDGVKVIEVEPSNNFTIL IESKKALEGLTLSHSDIQCNNILCKYYNLCHSEGMPEKYKIMELHEKIKCPKGNSLIKATVSTIN
Sequences:
>Translated_145_residues MDKRITLIGSKIAKTGNEFIYCGVLEECSECRFKKICHDGLIVGKRYRIVSVRSAKHPCIAYGDGVKVIEVEPSNNFTIL IESKKALEGLTLSHSDIQCNNILCKYYNLCHSEGMPEKYKIMELHEKIKCPKGNSLIKATVSTIN >Mature_145_residues MDKRITLIGSKIAKTGNEFIYCGVLEECSECRFKKICHDGLIVGKRYRIVSVRSAKHPCIAYGDGVKVIEVEPSNNFTIL IESKKALEGLTLSHSDIQCNNILCKYYNLCHSEGMPEKYKIMELHEKIKCPKGNSLIKATVSTIN
Specific function: Unknown
COG id: COG1860
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0179 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1037_META3 (A6UVU3)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325227.1 - STRING: A6UVU3 - GeneID: 5327593 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_1037 - eggNOG: arNOG10408 - HOGENOM: HBG540929 - OMA: NVCFNLE - BioCyc: MAEO419665:MAEO_1037-MONOMER - HAMAP: MF_00498 - InterPro: IPR005369 - ProDom: PD016182
Pfam domain/function: PF03684 UPF0179
EC number: NA
Molecular weight: Translated: 16297; Mature: 16297
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKRITLIGSKIAKTGNEFIYCGVLEECSECRFKKICHDGLIVGKRYRIVSVRSAKHPCI CCCEEEEECHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCCEE AYGDGVKVIEVEPSNNFTILIESKKALEGLTLSHSDIQCNNILCKYYNLCHSEGMPEKYK EECCCEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCHHH IMELHEKIKCPKGNSLIKATVSTIN HHHHHHHHCCCCCCCEEEEEEEECC >Mature Secondary Structure MDKRITLIGSKIAKTGNEFIYCGVLEECSECRFKKICHDGLIVGKRYRIVSVRSAKHPCI CCCEEEEECHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCCEE AYGDGVKVIEVEPSNNFTILIESKKALEGLTLSHSDIQCNNILCKYYNLCHSEGMPEKYK EECCCEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCHHH IMELHEKIKCPKGNSLIKATVSTIN HHHHHHHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA