Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401461

Identifier: 150401461

GI number: 150401461

Start: 1066155

End: 1066592

Strand: Reverse

Name: 150401461

Synonym: Maeo_1037

Alternate gene names: NA

Gene position: 1066592-1066155 (Counterclockwise)

Preceding gene: 150401463

Following gene: 150401456

Centisome position: 67.96

GC content: 31.74

Gene sequence:

>438_bases
ATGGATAAACGAATAACCCTTATTGGAAGTAAAATAGCAAAAACTGGAAATGAATTTATTTATTGTGGTGTTTTGGAGGA
ATGTTCTGAATGTAGGTTTAAAAAAATATGTCATGATGGTTTGATAGTCGGGAAAAGATATAGGATAGTTAGTGTTAGGT
CTGCAAAGCATCCATGCATAGCATATGGGGACGGAGTTAAAGTTATTGAGGTAGAGCCCTCTAATAATTTTACAATACTT
ATTGAATCAAAAAAGGCACTGGAGGGTTTAACCTTATCCCACAGCGATATTCAATGCAATAATATATTATGTAAATACTA
TAATTTATGTCATTCCGAAGGAATGCCTGAAAAATATAAAATCATGGAGCTCCATGAAAAAATAAAATGTCCAAAAGGAA
ATTCACTAATAAAAGCCACAGTATCTACTATCAATTAA

Upstream 100 bases:

>100_bases
CTCAAACATCTTACATATATAATATCTTTTTATAATATATTTTGTAAATATTATTATTTATATTTATTATATTTATTATA
TATTATGCCTTGGTGAGATT

Downstream 100 bases:

>100_bases
TATTAAATTCCTTTTTTTAATATTTCTTGTATATTTCCAAATAATACGGAGCTCCCACAAAAGCTCGGAAGATATCGGGA
AGCTTTACCAGAATTTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDKRITLIGSKIAKTGNEFIYCGVLEECSECRFKKICHDGLIVGKRYRIVSVRSAKHPCIAYGDGVKVIEVEPSNNFTIL
IESKKALEGLTLSHSDIQCNNILCKYYNLCHSEGMPEKYKIMELHEKIKCPKGNSLIKATVSTIN

Sequences:

>Translated_145_residues
MDKRITLIGSKIAKTGNEFIYCGVLEECSECRFKKICHDGLIVGKRYRIVSVRSAKHPCIAYGDGVKVIEVEPSNNFTIL
IESKKALEGLTLSHSDIQCNNILCKYYNLCHSEGMPEKYKIMELHEKIKCPKGNSLIKATVSTIN
>Mature_145_residues
MDKRITLIGSKIAKTGNEFIYCGVLEECSECRFKKICHDGLIVGKRYRIVSVRSAKHPCIAYGDGVKVIEVEPSNNFTIL
IESKKALEGLTLSHSDIQCNNILCKYYNLCHSEGMPEKYKIMELHEKIKCPKGNSLIKATVSTIN

Specific function: Unknown

COG id: COG1860

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0179 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1037_META3 (A6UVU3)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325227.1
- STRING:   A6UVU3
- GeneID:   5327593
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_1037
- eggNOG:   arNOG10408
- HOGENOM:   HBG540929
- OMA:   NVCFNLE
- BioCyc:   MAEO419665:MAEO_1037-MONOMER
- HAMAP:   MF_00498
- InterPro:   IPR005369
- ProDom:   PD016182

Pfam domain/function: PF03684 UPF0179

EC number: NA

Molecular weight: Translated: 16297; Mature: 16297

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRITLIGSKIAKTGNEFIYCGVLEECSECRFKKICHDGLIVGKRYRIVSVRSAKHPCI
CCCEEEEECHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCCEE
AYGDGVKVIEVEPSNNFTILIESKKALEGLTLSHSDIQCNNILCKYYNLCHSEGMPEKYK
EECCCEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCHHH
IMELHEKIKCPKGNSLIKATVSTIN
HHHHHHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MDKRITLIGSKIAKTGNEFIYCGVLEECSECRFKKICHDGLIVGKRYRIVSVRSAKHPCI
CCCEEEEECHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCCEE
AYGDGVKVIEVEPSNNFTILIESKKALEGLTLSHSDIQCNNILCKYYNLCHSEGMPEKYK
EECCCEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCHHH
IMELHEKIKCPKGNSLIKATVSTIN
HHHHHHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA