| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401452
Identifier: 150401452
GI number: 150401452
Start: 1056213
End: 1057745
Strand: Direct
Name: 150401452
Synonym: Maeo_1028
Alternate gene names: NA
Gene position: 1056213-1057745 (Clockwise)
Preceding gene: 150401451
Following gene: 150401455
Centisome position: 67.3
GC content: 35.29
Gene sequence:
>1533_bases ATGCATGACATAATCAAAAGTGCCGTAAATGATTTAGATGCCTGTTTAGAATTAAGAGGACTAATTACCAATAAATTAAC AAATAATAAATTAACCGAAGGGGATATAATTTCTGTTGTCGATGCTGTCGGGGAGCTCCCAATAGAAGACATACAAAAAA TAGGTAGCAACCTTAGAAAATTCCCATTAGGTTGCGATTTAGTTGAAATAGGAATTGGACCTTGTTCCTCCTCTTTAACG ATGCCCCAATTGGTGGAAAATTCTATGCTTTCAGATTATATGGGCTTTCCAATACATATTTGTGCCTATGCTTTGGGAGA TATTGCAGAACGGGAAAGCATAACACCATTAGAAGTATTTAAAACCATATCTGAAAGCGTAGAAGTTCCTATTGATTTAG ACCATTTTGGAAAATATGGAGCCATGAGATTTCCAAAGGAAATAACTCACTGTGGAGGAGATTGTTATAGAATGGGAGCT CCCTCCGAAGGTTGCCCAAGAGGTAGAATTCATAAAAGATTAATCGATAAAGAAAAAGAATATTCTTATGAATTTAATGA CTGGATAAAATTATCCTCCACAGTTTGCATAAATGTTGTGGAAGAACAGGGGGGAGAAGAACATGGAGCTCCACTTGAAG AAATGAAAATTGTGGCAAATGAAGCACATAAACATGGTAAAGGTTTAGAGGGCATATTCCATATTGGAGATGGATATGAT GATTTAATCACTGGTTTAAAGTCATGTGTGGATTTGGGGGTTGATGCTTTTGTAGTTGAGGGAGCTCCTTTTAACAGGGC AAAAGATAGATTAAAAACATTTGCAAAAGCAATTGCCGTATCCCGAATACTTGTAAAAGGGGGAGTGGTTGCCACAAATG GAGCTTATGAGGATGAATGTAGAATAGGGCTTAGAAGTGGTTTAAACATGATATTAAGCGGATTCTCTGGAAACCATCAC GGCTATATGTGTGGATATTCGCCAGACACAGCAAAGAGAGGAAACTTCGGAGCTCCACGGGTTTTAAGAATTATTAAAGA AGAAATTGAATATAATAAATTGGATACCTGTTTATTAACTAAACCAGTATTAAGAGCATTAACAAAAAGTGCCAAATTTT TAAATTATGGTGGAAATAGTTTAATTTATCCAAATAAAATAGGAGATTTCTTTACTGGCGATGCTCATTGGGTGGCAGTA AATAACAGCAATTTAGCAAACAACCTACACACAAAAACCATTGATGACATTGAAAAAGTAGATAAGATAGGAGCTCTCGG GGGGCGATATGTAGCTTGGGGACTTATTGACGCCTTAAAACCAGAGGAAGTTTATATCTCCGATGCCAATAAATGGGTGG AATATGCCACAATTAAAATATTAAATGATGCAGGAATAAATGCCTATGGAACAGATGGAAACGATAAAAAAGTTATAGAA CAGGCAGATAAATCATTTATTACCTCATTTATCCCAGAAATTAACTTAAAAATAAAAAATAGATATAATAAAGATGTTGA AAGTTTGATTTAA
Upstream 100 bases:
>100_bases GATTTAAATACATTAGAAAGAATTGAAAACAGATATTTACAAATTATAAATTCCATAAATTCATTATAATATTAAATGTA TATATGTTAAAGGTGGTTAG
Downstream 100 bases:
>100_bases TTTATATATTTTTTTATTATTTTTTTCTTAAATGAATACAATCCCCAACAGAAATATTTTTAATAACATTATCATCTGTT TTAAGATATAATCCATTAAA
Product: fibrillarin protein-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MHDIIKSAVNDLDACLELRGLITNKLTNNKLTEGDIISVVDAVGELPIEDIQKIGSNLRKFPLGCDLVEIGIGPCSSSLT MPQLVENSMLSDYMGFPIHICAYALGDIAERESITPLEVFKTISESVEVPIDLDHFGKYGAMRFPKEITHCGGDCYRMGA PSEGCPRGRIHKRLIDKEKEYSYEFNDWIKLSSTVCINVVEEQGGEEHGAPLEEMKIVANEAHKHGKGLEGIFHIGDGYD DLITGLKSCVDLGVDAFVVEGAPFNRAKDRLKTFAKAIAVSRILVKGGVVATNGAYEDECRIGLRSGLNMILSGFSGNHH GYMCGYSPDTAKRGNFGAPRVLRIIKEEIEYNKLDTCLLTKPVLRALTKSAKFLNYGGNSLIYPNKIGDFFTGDAHWVAV NNSNLANNLHTKTIDDIEKVDKIGALGGRYVAWGLIDALKPEEVYISDANKWVEYATIKILNDAGINAYGTDGNDKKVIE QADKSFITSFIPEINLKIKNRYNKDVESLI
Sequences:
>Translated_510_residues MHDIIKSAVNDLDACLELRGLITNKLTNNKLTEGDIISVVDAVGELPIEDIQKIGSNLRKFPLGCDLVEIGIGPCSSSLT MPQLVENSMLSDYMGFPIHICAYALGDIAERESITPLEVFKTISESVEVPIDLDHFGKYGAMRFPKEITHCGGDCYRMGA PSEGCPRGRIHKRLIDKEKEYSYEFNDWIKLSSTVCINVVEEQGGEEHGAPLEEMKIVANEAHKHGKGLEGIFHIGDGYD DLITGLKSCVDLGVDAFVVEGAPFNRAKDRLKTFAKAIAVSRILVKGGVVATNGAYEDECRIGLRSGLNMILSGFSGNHH GYMCGYSPDTAKRGNFGAPRVLRIIKEEIEYNKLDTCLLTKPVLRALTKSAKFLNYGGNSLIYPNKIGDFFTGDAHWVAV NNSNLANNLHTKTIDDIEKVDKIGALGGRYVAWGLIDALKPEEVYISDANKWVEYATIKILNDAGINAYGTDGNDKKVIE QADKSFITSFIPEINLKIKNRYNKDVESLI >Mature_510_residues MHDIIKSAVNDLDACLELRGLITNKLTNNKLTEGDIISVVDAVGELPIEDIQKIGSNLRKFPLGCDLVEIGIGPCSSSLT MPQLVENSMLSDYMGFPIHICAYALGDIAERESITPLEVFKTISESVEVPIDLDHFGKYGAMRFPKEITHCGGDCYRMGA PSEGCPRGRIHKRLIDKEKEYSYEFNDWIKLSSTVCINVVEEQGGEEHGAPLEEMKIVANEAHKHGKGLEGIFHIGDGYD DLITGLKSCVDLGVDAFVVEGAPFNRAKDRLKTFAKAIAVSRILVKGGVVATNGAYEDECRIGLRSGLNMILSGFSGNHH GYMCGYSPDTAKRGNFGAPRVLRIIKEEIEYNKLDTCLLTKPVLRALTKSAKFLNYGGNSLIYPNKIGDFFTGDAHWVAV NNSNLANNLHTKTIDDIEKVDKIGALGGRYVAWGLIDALKPEEVYISDANKWVEYATIKILNDAGINAYGTDGNDKKVIE QADKSFITSFIPEINLKIKNRYNKDVESLI
Specific function: Unknown
COG id: COG4018
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH1137 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016760 [H]
Pfam domain/function: PF10113 Fibrillarin_2 [H]
EC number: NA
Molecular weight: Translated: 56117; Mature: 56117
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDIIKSAVNDLDACLELRGLITNKLTNNKLTEGDIISVVDAVGELPIEDIQKIGSNLRK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH FPLGCDLVEIGIGPCSSSLTMPQLVENSMLSDYMGFPIHICAYALGDIAERESITPLEVF CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH KTISESVEVPIDLDHFGKYGAMRFPKEITHCGGDCYRMGAPSEGCPRGRIHKRLIDKEKE HHHHHHCCCCCCHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCHHHHHHHHCCHHH YSYEFNDWIKLSSTVCINVVEEQGGEEHGAPLEEMKIVANEAHKHGKGLEGIFHIGDGYD CCCCCCHHHEECCHHEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHH DLITGLKSCVDLGVDAFVVEGAPFNRAKDRLKTFAKAIAVSRILVKGGVVATNGAYEDEC HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHH RIGLRSGLNMILSGFSGNHHGYMCGYSPDTAKRGNFGAPRVLRIIKEEIEYNKLDTCLLT HHHHHHCHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH KPVLRALTKSAKFLNYGGNSLIYPNKIGDFFTGDAHWVAVNNSNLANNLHTKTIDDIEKV HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH DKIGALGGRYVAWGLIDALKPEEVYISDANKWVEYATIKILNDAGINAYGTDGNDKKVIE HHHHCCCCHHHHHHHHHCCCCCEEEECCCHHHEEEEEEEEEECCCCEECCCCCCHHHHHH QADKSFITSFIPEINLKIKNRYNKDVESLI HHHHHHHHHHCCCCCEEECCCCCHHHHHHC >Mature Secondary Structure MHDIIKSAVNDLDACLELRGLITNKLTNNKLTEGDIISVVDAVGELPIEDIQKIGSNLRK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH FPLGCDLVEIGIGPCSSSLTMPQLVENSMLSDYMGFPIHICAYALGDIAERESITPLEVF CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH KTISESVEVPIDLDHFGKYGAMRFPKEITHCGGDCYRMGAPSEGCPRGRIHKRLIDKEKE HHHHHHCCCCCCHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCHHHHHHHHCCHHH YSYEFNDWIKLSSTVCINVVEEQGGEEHGAPLEEMKIVANEAHKHGKGLEGIFHIGDGYD CCCCCCHHHEECCHHEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHH DLITGLKSCVDLGVDAFVVEGAPFNRAKDRLKTFAKAIAVSRILVKGGVVATNGAYEDEC HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHH RIGLRSGLNMILSGFSGNHHGYMCGYSPDTAKRGNFGAPRVLRIIKEEIEYNKLDTCLLT HHHHHHCHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH KPVLRALTKSAKFLNYGGNSLIYPNKIGDFFTGDAHWVAVNNSNLANNLHTKTIDDIEKV HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH DKIGALGGRYVAWGLIDALKPEEVYISDANKWVEYATIKILNDAGINAYGTDGNDKKVIE HHHHCCCCHHHHHHHHHCCCCCEEEECCCHHHEEEEEEEEEECCCCEECCCCCCHHHHHH QADKSFITSFIPEINLKIKNRYNKDVESLI HHHHHHHHHHCCCCCEEECCCCCHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]