Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401452

Identifier: 150401452

GI number: 150401452

Start: 1056213

End: 1057745

Strand: Direct

Name: 150401452

Synonym: Maeo_1028

Alternate gene names: NA

Gene position: 1056213-1057745 (Clockwise)

Preceding gene: 150401451

Following gene: 150401455

Centisome position: 67.3

GC content: 35.29

Gene sequence:

>1533_bases
ATGCATGACATAATCAAAAGTGCCGTAAATGATTTAGATGCCTGTTTAGAATTAAGAGGACTAATTACCAATAAATTAAC
AAATAATAAATTAACCGAAGGGGATATAATTTCTGTTGTCGATGCTGTCGGGGAGCTCCCAATAGAAGACATACAAAAAA
TAGGTAGCAACCTTAGAAAATTCCCATTAGGTTGCGATTTAGTTGAAATAGGAATTGGACCTTGTTCCTCCTCTTTAACG
ATGCCCCAATTGGTGGAAAATTCTATGCTTTCAGATTATATGGGCTTTCCAATACATATTTGTGCCTATGCTTTGGGAGA
TATTGCAGAACGGGAAAGCATAACACCATTAGAAGTATTTAAAACCATATCTGAAAGCGTAGAAGTTCCTATTGATTTAG
ACCATTTTGGAAAATATGGAGCCATGAGATTTCCAAAGGAAATAACTCACTGTGGAGGAGATTGTTATAGAATGGGAGCT
CCCTCCGAAGGTTGCCCAAGAGGTAGAATTCATAAAAGATTAATCGATAAAGAAAAAGAATATTCTTATGAATTTAATGA
CTGGATAAAATTATCCTCCACAGTTTGCATAAATGTTGTGGAAGAACAGGGGGGAGAAGAACATGGAGCTCCACTTGAAG
AAATGAAAATTGTGGCAAATGAAGCACATAAACATGGTAAAGGTTTAGAGGGCATATTCCATATTGGAGATGGATATGAT
GATTTAATCACTGGTTTAAAGTCATGTGTGGATTTGGGGGTTGATGCTTTTGTAGTTGAGGGAGCTCCTTTTAACAGGGC
AAAAGATAGATTAAAAACATTTGCAAAAGCAATTGCCGTATCCCGAATACTTGTAAAAGGGGGAGTGGTTGCCACAAATG
GAGCTTATGAGGATGAATGTAGAATAGGGCTTAGAAGTGGTTTAAACATGATATTAAGCGGATTCTCTGGAAACCATCAC
GGCTATATGTGTGGATATTCGCCAGACACAGCAAAGAGAGGAAACTTCGGAGCTCCACGGGTTTTAAGAATTATTAAAGA
AGAAATTGAATATAATAAATTGGATACCTGTTTATTAACTAAACCAGTATTAAGAGCATTAACAAAAAGTGCCAAATTTT
TAAATTATGGTGGAAATAGTTTAATTTATCCAAATAAAATAGGAGATTTCTTTACTGGCGATGCTCATTGGGTGGCAGTA
AATAACAGCAATTTAGCAAACAACCTACACACAAAAACCATTGATGACATTGAAAAAGTAGATAAGATAGGAGCTCTCGG
GGGGCGATATGTAGCTTGGGGACTTATTGACGCCTTAAAACCAGAGGAAGTTTATATCTCCGATGCCAATAAATGGGTGG
AATATGCCACAATTAAAATATTAAATGATGCAGGAATAAATGCCTATGGAACAGATGGAAACGATAAAAAAGTTATAGAA
CAGGCAGATAAATCATTTATTACCTCATTTATCCCAGAAATTAACTTAAAAATAAAAAATAGATATAATAAAGATGTTGA
AAGTTTGATTTAA

Upstream 100 bases:

>100_bases
GATTTAAATACATTAGAAAGAATTGAAAACAGATATTTACAAATTATAAATTCCATAAATTCATTATAATATTAAATGTA
TATATGTTAAAGGTGGTTAG

Downstream 100 bases:

>100_bases
TTTATATATTTTTTTATTATTTTTTTCTTAAATGAATACAATCCCCAACAGAAATATTTTTAATAACATTATCATCTGTT
TTAAGATATAATCCATTAAA

Product: fibrillarin protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MHDIIKSAVNDLDACLELRGLITNKLTNNKLTEGDIISVVDAVGELPIEDIQKIGSNLRKFPLGCDLVEIGIGPCSSSLT
MPQLVENSMLSDYMGFPIHICAYALGDIAERESITPLEVFKTISESVEVPIDLDHFGKYGAMRFPKEITHCGGDCYRMGA
PSEGCPRGRIHKRLIDKEKEYSYEFNDWIKLSSTVCINVVEEQGGEEHGAPLEEMKIVANEAHKHGKGLEGIFHIGDGYD
DLITGLKSCVDLGVDAFVVEGAPFNRAKDRLKTFAKAIAVSRILVKGGVVATNGAYEDECRIGLRSGLNMILSGFSGNHH
GYMCGYSPDTAKRGNFGAPRVLRIIKEEIEYNKLDTCLLTKPVLRALTKSAKFLNYGGNSLIYPNKIGDFFTGDAHWVAV
NNSNLANNLHTKTIDDIEKVDKIGALGGRYVAWGLIDALKPEEVYISDANKWVEYATIKILNDAGINAYGTDGNDKKVIE
QADKSFITSFIPEINLKIKNRYNKDVESLI

Sequences:

>Translated_510_residues
MHDIIKSAVNDLDACLELRGLITNKLTNNKLTEGDIISVVDAVGELPIEDIQKIGSNLRKFPLGCDLVEIGIGPCSSSLT
MPQLVENSMLSDYMGFPIHICAYALGDIAERESITPLEVFKTISESVEVPIDLDHFGKYGAMRFPKEITHCGGDCYRMGA
PSEGCPRGRIHKRLIDKEKEYSYEFNDWIKLSSTVCINVVEEQGGEEHGAPLEEMKIVANEAHKHGKGLEGIFHIGDGYD
DLITGLKSCVDLGVDAFVVEGAPFNRAKDRLKTFAKAIAVSRILVKGGVVATNGAYEDECRIGLRSGLNMILSGFSGNHH
GYMCGYSPDTAKRGNFGAPRVLRIIKEEIEYNKLDTCLLTKPVLRALTKSAKFLNYGGNSLIYPNKIGDFFTGDAHWVAV
NNSNLANNLHTKTIDDIEKVDKIGALGGRYVAWGLIDALKPEEVYISDANKWVEYATIKILNDAGINAYGTDGNDKKVIE
QADKSFITSFIPEINLKIKNRYNKDVESLI
>Mature_510_residues
MHDIIKSAVNDLDACLELRGLITNKLTNNKLTEGDIISVVDAVGELPIEDIQKIGSNLRKFPLGCDLVEIGIGPCSSSLT
MPQLVENSMLSDYMGFPIHICAYALGDIAERESITPLEVFKTISESVEVPIDLDHFGKYGAMRFPKEITHCGGDCYRMGA
PSEGCPRGRIHKRLIDKEKEYSYEFNDWIKLSSTVCINVVEEQGGEEHGAPLEEMKIVANEAHKHGKGLEGIFHIGDGYD
DLITGLKSCVDLGVDAFVVEGAPFNRAKDRLKTFAKAIAVSRILVKGGVVATNGAYEDECRIGLRSGLNMILSGFSGNHH
GYMCGYSPDTAKRGNFGAPRVLRIIKEEIEYNKLDTCLLTKPVLRALTKSAKFLNYGGNSLIYPNKIGDFFTGDAHWVAV
NNSNLANNLHTKTIDDIEKVDKIGALGGRYVAWGLIDALKPEEVYISDANKWVEYATIKILNDAGINAYGTDGNDKKVIE
QADKSFITSFIPEINLKIKNRYNKDVESLI

Specific function: Unknown

COG id: COG4018

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH1137 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016760 [H]

Pfam domain/function: PF10113 Fibrillarin_2 [H]

EC number: NA

Molecular weight: Translated: 56117; Mature: 56117

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDIIKSAVNDLDACLELRGLITNKLTNNKLTEGDIISVVDAVGELPIEDIQKIGSNLRK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
FPLGCDLVEIGIGPCSSSLTMPQLVENSMLSDYMGFPIHICAYALGDIAERESITPLEVF
CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH
KTISESVEVPIDLDHFGKYGAMRFPKEITHCGGDCYRMGAPSEGCPRGRIHKRLIDKEKE
HHHHHHCCCCCCHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCHHHHHHHHCCHHH
YSYEFNDWIKLSSTVCINVVEEQGGEEHGAPLEEMKIVANEAHKHGKGLEGIFHIGDGYD
CCCCCCHHHEECCHHEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHH
DLITGLKSCVDLGVDAFVVEGAPFNRAKDRLKTFAKAIAVSRILVKGGVVATNGAYEDEC
HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHH
RIGLRSGLNMILSGFSGNHHGYMCGYSPDTAKRGNFGAPRVLRIIKEEIEYNKLDTCLLT
HHHHHHCHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
KPVLRALTKSAKFLNYGGNSLIYPNKIGDFFTGDAHWVAVNNSNLANNLHTKTIDDIEKV
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH
DKIGALGGRYVAWGLIDALKPEEVYISDANKWVEYATIKILNDAGINAYGTDGNDKKVIE
HHHHCCCCHHHHHHHHHCCCCCEEEECCCHHHEEEEEEEEEECCCCEECCCCCCHHHHHH
QADKSFITSFIPEINLKIKNRYNKDVESLI
HHHHHHHHHHCCCCCEEECCCCCHHHHHHC
>Mature Secondary Structure
MHDIIKSAVNDLDACLELRGLITNKLTNNKLTEGDIISVVDAVGELPIEDIQKIGSNLRK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
FPLGCDLVEIGIGPCSSSLTMPQLVENSMLSDYMGFPIHICAYALGDIAERESITPLEVF
CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH
KTISESVEVPIDLDHFGKYGAMRFPKEITHCGGDCYRMGAPSEGCPRGRIHKRLIDKEKE
HHHHHHCCCCCCHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCHHHHHHHHCCHHH
YSYEFNDWIKLSSTVCINVVEEQGGEEHGAPLEEMKIVANEAHKHGKGLEGIFHIGDGYD
CCCCCCHHHEECCHHEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHH
DLITGLKSCVDLGVDAFVVEGAPFNRAKDRLKTFAKAIAVSRILVKGGVVATNGAYEDEC
HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHH
RIGLRSGLNMILSGFSGNHHGYMCGYSPDTAKRGNFGAPRVLRIIKEEIEYNKLDTCLLT
HHHHHHCHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
KPVLRALTKSAKFLNYGGNSLIYPNKIGDFFTGDAHWVAVNNSNLANNLHTKTIDDIEKV
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH
DKIGALGGRYVAWGLIDALKPEEVYISDANKWVEYATIKILNDAGINAYGTDGNDKKVIE
HHHHCCCCHHHHHHHHHCCCCCEEEECCCHHHEEEEEEEEEECCCCEECCCCCCHHHHHH
QADKSFITSFIPEINLKIKNRYNKDVESLI
HHHHHHHHHHCCCCCEEECCCCCHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]