| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401417
Identifier: 150401417
GI number: 150401417
Start: 1017768
End: 1018352
Strand: Reverse
Name: 150401417
Synonym: Maeo_0993
Alternate gene names: NA
Gene position: 1018352-1017768 (Counterclockwise)
Preceding gene: 150401418
Following gene: 150401416
Centisome position: 64.88
GC content: 27.52
Gene sequence:
>585_bases ATGAATGGAATAAAAAAAATATCGTTATTAATATTATCAATTATTTTAATTGGTAGTATGGCAGCGTGTGTAGAAAAGAA AAGCACACTATATGATTATGGGGACAAAAATACAATATTTGTCGATGTGAATAATCAGTCTATTCAGTTGGAGCTCCGAA CCACAGTGGGGGAGGCACTAACTACAAAATTAGTAAATACAAATATTGAAGACATAAAAAACGATTACAATAATAATAAA ATAATATATATAGAATATGACCCAAATATTTCGCAAAATGATGGGGGAGTTTCAATTATAGATTTGGTTTCAAAATTGAA ATTTTACAATTCATTTGTAAAAAATAATATGCAGATAGTGGATAGCTCTGTATTTACCAACCAATCTGAAATTGATAAAA TTAAAAACAGTAAGATAACAATGATTGTGAAAATAACAAAAAGCAACAGCACGGCTACAATATCAAAAAGCAATGGGGTA TATGTTATAGAAGGAAATTCATTAAAAGAACTTGACAAAGCAACTACAATGTTTGTATTGTCGATATATACAAATCCAAA GGATAGATATTATTTAACAATATAA
Upstream 100 bases:
>100_bases GGCGGGGAAGATATAGACGATGAGATGTTTATAAAAATAGTAGATATAATAAATAAACAATAAATTAATCATTTTATAAT TAAAAAATTCGTGTGATGAA
Downstream 100 bases:
>100_bases TCATATCTTTTAGTCCATTTTTTATTTTTATTTTATTATTAATTATTTTATTCTTATTTTTGTTTTATAAGATAATATTT TATATAATTATAGTATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNGIKKISLLILSIILIGSMAACVEKKSTLYDYGDKNTIFVDVNNQSIQLELRTTVGEALTTKLVNTNIEDIKNDYNNNK IIYIEYDPNISQNDGGVSIIDLVSKLKFYNSFVKNNMQIVDSSVFTNQSEIDKIKNSKITMIVKITKSNSTATISKSNGV YVIEGNSLKELDKATTMFVLSIYTNPKDRYYLTI
Sequences:
>Translated_194_residues MNGIKKISLLILSIILIGSMAACVEKKSTLYDYGDKNTIFVDVNNQSIQLELRTTVGEALTTKLVNTNIEDIKNDYNNNK IIYIEYDPNISQNDGGVSIIDLVSKLKFYNSFVKNNMQIVDSSVFTNQSEIDKIKNSKITMIVKITKSNSTATISKSNGV YVIEGNSLKELDKATTMFVLSIYTNPKDRYYLTI >Mature_194_residues MNGIKKISLLILSIILIGSMAACVEKKSTLYDYGDKNTIFVDVNNQSIQLELRTTVGEALTTKLVNTNIEDIKNDYNNNK IIYIEYDPNISQNDGGVSIIDLVSKLKFYNSFVKNNMQIVDSSVFTNQSEIDKIKNSKITMIVKITKSNSTATISKSNGV YVIEGNSLKELDKATTMFVLSIYTNPKDRYYLTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21777; Mature: 21777
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGIKKISLLILSIILIGSMAACVEKKSTLYDYGDKNTIFVDVNNQSIQLELRTTVGEAL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCEEEEEEEHHHHHHH TTKLVNTNIEDIKNDYNNNKIIYIEYDPNISQNDGGVSIIDLVSKLKFYNSFVKNNMQIV HHHHHCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE DSSVFTNQSEIDKIKNSKITMIVKITKSNSTATISKSNGVYVIEGNSLKELDKATTMFVL EHHHHCCHHHHHHHCCCEEEEEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHEEEEEE SIYTNPKDRYYLTI EEEECCCCCEEEEC >Mature Secondary Structure MNGIKKISLLILSIILIGSMAACVEKKSTLYDYGDKNTIFVDVNNQSIQLELRTTVGEAL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCEEEEEEEHHHHHHH TTKLVNTNIEDIKNDYNNNKIIYIEYDPNISQNDGGVSIIDLVSKLKFYNSFVKNNMQIV HHHHHCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE DSSVFTNQSEIDKIKNSKITMIVKITKSNSTATISKSNGVYVIEGNSLKELDKATTMFVL EHHHHCCHHHHHHHCCCEEEEEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHEEEEEE SIYTNPKDRYYLTI EEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]