| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401412
Identifier: 150401412
GI number: 150401412
Start: 1013924
End: 1014568
Strand: Reverse
Name: 150401412
Synonym: Maeo_0988
Alternate gene names: NA
Gene position: 1014568-1013924 (Counterclockwise)
Preceding gene: 150401413
Following gene: 150401408
Centisome position: 64.64
GC content: 26.05
Gene sequence:
>645_bases ATGGGGGAGGATTATTATGAAACATTAAAGGTAGTATATCGTGAATATCAAAGAGTAAAAAAACATTTGGGGCGTAAACC AAATAGGGTCGAAATGTTTAAGTACATGGATGATAATCTATATCAAAAAATCAGGAGTAATTGTAAAATCAATATATTTA GAAATTATTTAGGTTTTTTAGATAAATTTGGGGAGCTCCATGGGGAAGAAAAAGAAGTCCAGAATATTGCAGGAGATTTT TTAAATATGGTGGAACAAACACGAATGACGAAAACCTATAAAATTCCTATTTTAAAATCATTTATAAGAGATAATAACAT ATCTTTAAAATGTGATGAAGAGGATATTTACAAAAGTTTCAAAGAATTTTACAATAATCCGGAGAATTCTTTAGATATGG AACGACATGAAAAAACTAAAAATTTTAAAAAATGGAGTAAATGGGAATATGTAAAATTAGCAAAAGAAAATCCTATAAAA TTTTTAATAAAAACAGAAGGAAAATATTTTAAAATAGATGATAATTATTTTTGCTTAACTGAACAGTTGAAACCGGTTTT AGATAATAATATCTTTGTAGATAATTACATAGATATTTTAGAATTTAGGCGTCTGGAATATTTTAGATGGCATCGCTTAT TATAA
Upstream 100 bases:
>100_bases TCTCTTAATGAAGTTAAAGAAATAAAAAATAAAAAATTCAAAGAAAGAGGGGGATTTTCAAAAAAACTTATTTTAAAAGA AGTAATCGAGGATGGTTAAT
Downstream 100 bases:
>100_bases CTAAATATATTAAAATGCACTCCTGTATTACCATTTTTTAATTGTTGTATAAATCGGTCCTTTTTCCGTTAATTGGCTAC CAATTAAAACAATATTTTTA
Product: helicase, putative
Products: NA
Alternate protein names: Helicase; DNA/RNA Helicase; Type III Restriction Protein; Type III Restriction Res Subunit; DEAD/DEAH Box Helicase Domain-Containing Protein; HKD Family Nuclease/DNA/RNA Helicase
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MGEDYYETLKVVYREYQRVKKHLGRKPNRVEMFKYMDDNLYQKIRSNCKINIFRNYLGFLDKFGELHGEEKEVQNIAGDF LNMVEQTRMTKTYKIPILKSFIRDNNISLKCDEEDIYKSFKEFYNNPENSLDMERHEKTKNFKKWSKWEYVKLAKENPIK FLIKTEGKYFKIDDNYFCLTEQLKPVLDNNIFVDNYIDILEFRRLEYFRWHRLL
Sequences:
>Translated_214_residues MGEDYYETLKVVYREYQRVKKHLGRKPNRVEMFKYMDDNLYQKIRSNCKINIFRNYLGFLDKFGELHGEEKEVQNIAGDF LNMVEQTRMTKTYKIPILKSFIRDNNISLKCDEEDIYKSFKEFYNNPENSLDMERHEKTKNFKKWSKWEYVKLAKENPIK FLIKTEGKYFKIDDNYFCLTEQLKPVLDNNIFVDNYIDILEFRRLEYFRWHRLL >Mature_213_residues GEDYYETLKVVYREYQRVKKHLGRKPNRVEMFKYMDDNLYQKIRSNCKINIFRNYLGFLDKFGELHGEEKEVQNIAGDFL NMVEQTRMTKTYKIPILKSFIRDNNISLKCDEEDIYKSFKEFYNNPENSLDMERHEKTKNFKKWSKWEYVKLAKENPIKF LIKTEGKYFKIDDNYFCLTEQLKPVLDNNIFVDNYIDILEFRRLEYFRWHRLL
Specific function: Unknown
COG id: COG1061
COG function: function code KL; DNA or RNA helicases of superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26383; Mature: 26251
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEDYYETLKVVYREYQRVKKHLGRKPNRVEMFKYMDDNLYQKIRSNCKINIFRNYLGFL CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHH DKFGELHGEEKEVQNIAGDFLNMVEQTRMTKTYKIPILKSFIRDNNISLKCDEEDIYKSF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH KEFYNNPENSLDMERHEKTKNFKKWSKWEYVKLAKENPIKFLIKTEGKYFKIDDNYFCLT HHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHEECCCCCEEEEEECCCCEEEECCCEEEEH EQLKPVLDNNIFVDNYIDILEFRRLEYFRWHRLL HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GEDYYETLKVVYREYQRVKKHLGRKPNRVEMFKYMDDNLYQKIRSNCKINIFRNYLGFL CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHH DKFGELHGEEKEVQNIAGDFLNMVEQTRMTKTYKIPILKSFIRDNNISLKCDEEDIYKSF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH KEFYNNPENSLDMERHEKTKNFKKWSKWEYVKLAKENPIKFLIKTEGKYFKIDDNYFCLT HHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHEECCCCCEEEEEECCCCEEEECCCEEEEH EQLKPVLDNNIFVDNYIDILEFRRLEYFRWHRLL HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA