Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401412

Identifier: 150401412

GI number: 150401412

Start: 1013924

End: 1014568

Strand: Reverse

Name: 150401412

Synonym: Maeo_0988

Alternate gene names: NA

Gene position: 1014568-1013924 (Counterclockwise)

Preceding gene: 150401413

Following gene: 150401408

Centisome position: 64.64

GC content: 26.05

Gene sequence:

>645_bases
ATGGGGGAGGATTATTATGAAACATTAAAGGTAGTATATCGTGAATATCAAAGAGTAAAAAAACATTTGGGGCGTAAACC
AAATAGGGTCGAAATGTTTAAGTACATGGATGATAATCTATATCAAAAAATCAGGAGTAATTGTAAAATCAATATATTTA
GAAATTATTTAGGTTTTTTAGATAAATTTGGGGAGCTCCATGGGGAAGAAAAAGAAGTCCAGAATATTGCAGGAGATTTT
TTAAATATGGTGGAACAAACACGAATGACGAAAACCTATAAAATTCCTATTTTAAAATCATTTATAAGAGATAATAACAT
ATCTTTAAAATGTGATGAAGAGGATATTTACAAAAGTTTCAAAGAATTTTACAATAATCCGGAGAATTCTTTAGATATGG
AACGACATGAAAAAACTAAAAATTTTAAAAAATGGAGTAAATGGGAATATGTAAAATTAGCAAAAGAAAATCCTATAAAA
TTTTTAATAAAAACAGAAGGAAAATATTTTAAAATAGATGATAATTATTTTTGCTTAACTGAACAGTTGAAACCGGTTTT
AGATAATAATATCTTTGTAGATAATTACATAGATATTTTAGAATTTAGGCGTCTGGAATATTTTAGATGGCATCGCTTAT
TATAA

Upstream 100 bases:

>100_bases
TCTCTTAATGAAGTTAAAGAAATAAAAAATAAAAAATTCAAAGAAAGAGGGGGATTTTCAAAAAAACTTATTTTAAAAGA
AGTAATCGAGGATGGTTAAT

Downstream 100 bases:

>100_bases
CTAAATATATTAAAATGCACTCCTGTATTACCATTTTTTAATTGTTGTATAAATCGGTCCTTTTTCCGTTAATTGGCTAC
CAATTAAAACAATATTTTTA

Product: helicase, putative

Products: NA

Alternate protein names: Helicase; DNA/RNA Helicase; Type III Restriction Protein; Type III Restriction Res Subunit; DEAD/DEAH Box Helicase Domain-Containing Protein; HKD Family Nuclease/DNA/RNA Helicase

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MGEDYYETLKVVYREYQRVKKHLGRKPNRVEMFKYMDDNLYQKIRSNCKINIFRNYLGFLDKFGELHGEEKEVQNIAGDF
LNMVEQTRMTKTYKIPILKSFIRDNNISLKCDEEDIYKSFKEFYNNPENSLDMERHEKTKNFKKWSKWEYVKLAKENPIK
FLIKTEGKYFKIDDNYFCLTEQLKPVLDNNIFVDNYIDILEFRRLEYFRWHRLL

Sequences:

>Translated_214_residues
MGEDYYETLKVVYREYQRVKKHLGRKPNRVEMFKYMDDNLYQKIRSNCKINIFRNYLGFLDKFGELHGEEKEVQNIAGDF
LNMVEQTRMTKTYKIPILKSFIRDNNISLKCDEEDIYKSFKEFYNNPENSLDMERHEKTKNFKKWSKWEYVKLAKENPIK
FLIKTEGKYFKIDDNYFCLTEQLKPVLDNNIFVDNYIDILEFRRLEYFRWHRLL
>Mature_213_residues
GEDYYETLKVVYREYQRVKKHLGRKPNRVEMFKYMDDNLYQKIRSNCKINIFRNYLGFLDKFGELHGEEKEVQNIAGDFL
NMVEQTRMTKTYKIPILKSFIRDNNISLKCDEEDIYKSFKEFYNNPENSLDMERHEKTKNFKKWSKWEYVKLAKENPIKF
LIKTEGKYFKIDDNYFCLTEQLKPVLDNNIFVDNYIDILEFRRLEYFRWHRLL

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26383; Mature: 26251

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEDYYETLKVVYREYQRVKKHLGRKPNRVEMFKYMDDNLYQKIRSNCKINIFRNYLGFL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHH
DKFGELHGEEKEVQNIAGDFLNMVEQTRMTKTYKIPILKSFIRDNNISLKCDEEDIYKSF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
KEFYNNPENSLDMERHEKTKNFKKWSKWEYVKLAKENPIKFLIKTEGKYFKIDDNYFCLT
HHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHEECCCCCEEEEEECCCCEEEECCCEEEEH
EQLKPVLDNNIFVDNYIDILEFRRLEYFRWHRLL
HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GEDYYETLKVVYREYQRVKKHLGRKPNRVEMFKYMDDNLYQKIRSNCKINIFRNYLGFL
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHH
DKFGELHGEEKEVQNIAGDFLNMVEQTRMTKTYKIPILKSFIRDNNISLKCDEEDIYKSF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
KEFYNNPENSLDMERHEKTKNFKKWSKWEYVKLAKENPIKFLIKTEGKYFKIDDNYFCLT
HHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHEECCCCCEEEEEECCCCEEEECCCEEEEH
EQLKPVLDNNIFVDNYIDILEFRRLEYFRWHRLL
HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA