| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is xapA [C]
Identifier: 150401353
GI number: 150401353
Start: 948635
End: 949393
Strand: Direct
Name: xapA [C]
Synonym: Maeo_0926
Alternate gene names: 150401353
Gene position: 948635-949393 (Clockwise)
Preceding gene: 150401349
Following gene: 150401360
Centisome position: 60.44
GC content: 33.07
Gene sequence:
>759_bases TTGATAGGCATAATCGGAGGAACTGGAATATCTACAATATTAAATAAAGGCAGAGAGGAAATAATAAACACAAAATATGG AAATGCAAAGGTATTAATTGATAAAGAAAGCGATGTAGTTTTATTATTTAGGCACGGCATACGCCATAACACCCCACCAC ACAAAATAAATTATAGGGCCAATATTATGGCACTTAAACAGCTTGGTGTCGATAAAATTTTAGCAATAAATGCCGTAGGT TCATTAAAAGAAGAAATAACTCCGGGAAGTTTTGTAGTGGCAAATGATTTTATAGAATTCACAAAAGAAAGGAAAAGCAC ATTTTACGATGGAGAAAATGGCGAAGTTGTGCATATTGATGTTTCAGAGCCTTATTGCCCACAAATGACAGAATTAATAA AATGTTTATTGAATAATAGGGGCTACAAATATTGCGAAGGCACCTATGTATGCACAGAAGGGCCAAGATTTGAAACTAAG GCAGAAATAAATTTCTATAAAACAATAGGAGATATTGTGGGCATGACGGCATACCCCGAAGTAGTTCTTGCTAGGGAGCT CCAACTATGCTATGGTTCTATATGCACAGTCTCCAACTATTGCACAGGAATATCTAAAAGTAGATTAACTATATCAGAAG TATATGAAACAATAAATGAAATGGAAAATGAAATATTGAATATTGTGGAGGATATAATAAATTATAAACGGGACCAATGT AGTTATTGTAAAAATATACTAAATGATGCTAAAATGTAA
Upstream 100 bases:
>100_bases TTTAATAAATAAGTTATGATGGAATAAAAAAATAAATACAATAACTACAAAAACATTGAAGTCCCCAATAATATTTAAAA ATTAAAAAATAGGTGGTATT
Downstream 100 bases:
>100_bases TATAATAATTATTTGTGTGAATTACCCCTCCCTTACGGAAGGAGCTCCCTGACTCATAGGGGATACTTGCCCAGAGATTA CCTTTATGTAAGGTATAATT
Product: purine phosphorylase family 2
Products: ribose-1-phosphate; xanthine [C]
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MIGIIGGTGISTILNKGREEIINTKYGNAKVLIDKESDVVLLFRHGIRHNTPPHKINYRANIMALKQLGVDKILAINAVG SLKEEITPGSFVVANDFIEFTKERKSTFYDGENGEVVHIDVSEPYCPQMTELIKCLLNNRGYKYCEGTYVCTEGPRFETK AEINFYKTIGDIVGMTAYPEVVLARELQLCYGSICTVSNYCTGISKSRLTISEVYETINEMENEILNIVEDIINYKRDQC SYCKNILNDAKM
Sequences:
>Translated_252_residues MIGIIGGTGISTILNKGREEIINTKYGNAKVLIDKESDVVLLFRHGIRHNTPPHKINYRANIMALKQLGVDKILAINAVG SLKEEITPGSFVVANDFIEFTKERKSTFYDGENGEVVHIDVSEPYCPQMTELIKCLLNNRGYKYCEGTYVCTEGPRFETK AEINFYKTIGDIVGMTAYPEVVLARELQLCYGSICTVSNYCTGISKSRLTISEVYETINEMENEILNIVEDIINYKRDQC SYCKNILNDAKM >Mature_252_residues MIGIIGGTGISTILNKGREEIINTKYGNAKVLIDKESDVVLLFRHGIRHNTPPHKINYRANIMALKQLGVDKILAINAVG SLKEEITPGSFVVANDFIEFTKERKSTFYDGENGEVVHIDVSEPYCPQMTELIKCLLNNRGYKYCEGTYVCTEGPRFETK AEINFYKTIGDIVGMTAYPEVVLARELQLCYGSICTVSNYCTGISKSRLTISEVYETINEMENEILNIVEDIINYKRDQC SYCKNILNDAKM
Specific function: The Nucleoside Phosphorylases Catalyze The Phosphorolytic Breakdown Of The N-Glycosidic Bond In The Nucleoside Molecule, With The Formation Of The Corresponding Free Bases And Pentose-1-Phosphate. This Protein Can Degrade All Purine Nucleosides Except Ade
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI47132622, Length=240, Percent_Identity=39.1666666666667, Blast_Score=164, Evalue=1e-40, Organism=Escherichia coli, GI1788746, Length=169, Percent_Identity=27.2189349112426, Blast_Score=78, Evalue=7e-16, Organism=Caenorhabditis elegans, GI71980569, Length=229, Percent_Identity=34.9344978165939, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6323045, Length=223, Percent_Identity=33.1838565022422, Blast_Score=113, Evalue=3e-26, Organism=Drosophila melanogaster, GI20130079, Length=278, Percent_Identity=35.9712230215827, Blast_Score=146, Evalue=1e-35, Organism=Drosophila melanogaster, GI221459247, Length=225, Percent_Identity=34.2222222222222, Blast_Score=122, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010044 - InterPro: IPR000845 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 28396; Mature: 28396
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGIIGGTGISTILNKGREEIINTKYGNAKVLIDKESDVVLLFRHGIRHNTPPHKINYRA CEEEECCCCHHHHHHCCHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEECHH NIMALKQLGVDKILAINAVGSLKEEITPGSFVVANDFIEFTKERKSTFYDGENGEVVHID HHHHHHHCCCHHEEEHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEEE VSEPYCPQMTELIKCLLNNRGYKYCEGTYVCTEGPRFETKAEINFYKTIGDIVGMTAYPE CCCCCCHHHHHHHHHHHCCCCCEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHH VVLARELQLCYGSICTVSNYCTGISKSRLTISEVYETINEMENEILNIVEDIINYKRDQC HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SYCKNILNDAKM HHHHHHHHHCCC >Mature Secondary Structure MIGIIGGTGISTILNKGREEIINTKYGNAKVLIDKESDVVLLFRHGIRHNTPPHKINYRA CEEEECCCCHHHHHHCCHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEECHH NIMALKQLGVDKILAINAVGSLKEEITPGSFVVANDFIEFTKERKSTFYDGENGEVVHID HHHHHHHCCCHHEEEHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEEE VSEPYCPQMTELIKCLLNNRGYKYCEGTYVCTEGPRFETKAEINFYKTIGDIVGMTAYPE CCCCCCHHHHHHHHHHHCCCCCEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHH VVLARELQLCYGSICTVSNYCTGISKSRLTISEVYETINEMENEILNIVEDIINYKRDQC HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SYCKNILNDAKM HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: xanthosine; phosphate [C]
Specific reaction: xanthosine + phosphate = ribose-1-phosphate + xanthine [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]