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The map label for this gene is ttdB [C]

Identifier: 150401345

GI number: 150401345

Start: 941082

End: 941669

Strand: Direct

Name: ttdB [C]

Synonym: Maeo_0918

Alternate gene names: 150401345

Gene position: 941082-941669 (Clockwise)

Preceding gene: 150401344

Following gene: 150401346

Centisome position: 59.96

GC content: 32.82

Gene sequence:

>588_bases
ATGGTAACTTTAAAAACCCCATTATCAAAGGAAATCATTAAAAAATTAAATGTTGGAGATATTGTTTATTTAAATGGTAT
AATTTACACAGGAAGAGATGAGGCCCATTTAACAATATTAGAAGAAGGCGAAAAACCAGAATCAAAAATAATAGTGGAAA
AATTAAAACATGGCGCAATATATCATGCAGGACCAATAATGAAAAAAGAAAATAATAAATGGAAATGTGTGGCAATAGGT
CCAACAACTTCCGCTAGAATGAATAATATGGAGGAAGAATTTATAAAAATAACAGATATATCTGTTATAGTTGGAAAGGG
GGGCATGAAAGATGAATTATTAGATGCATTTAATGCCCATGGTGTTGTATATCTGGGAGCTCCGGGCGGTTGTGCCGCAC
TTCTTGCAAATTCAATAGTGGAGGTAAAAGGAGTTTATTATGAGGAGCTAGGTATGCCCGAAGCATTTTGGGAATTAGAA
GTTAAAGACTTTGGGCCCCTTATTGTATCAATGGACGCCAACGGAAACAGCATTTATAAAGAAGTAAATAACATAGTTAA
TAAAAATTTAGAAAAAATGATACAATAA

Upstream 100 bases:

>100_bases
GTGTTGATTGGCACCATAACCTGAATAACACATATAAATATTATATTAAATAAAATATAATATATTAAAATATAAAATTA
ATAATTTGTGAGGGAATAAT

Downstream 100 bases:

>100_bases
ATCAACGGATATTATATTTTATATATGGAATATATAATCATGCATGATTATTATCATAAATGAGATTAAATATTATACAT
TAGATATTTTTGCAAATGGC

Product: tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit

Products: NA

Alternate protein names: Fumarase [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVTLKTPLSKEIIKKLNVGDIVYLNGIIYTGRDEAHLTILEEGEKPESKIIVEKLKHGAIYHAGPIMKKENNKWKCVAIG
PTTSARMNNMEEEFIKITDISVIVGKGGMKDELLDAFNAHGVVYLGAPGGCAALLANSIVEVKGVYYEELGMPEAFWELE
VKDFGPLIVSMDANGNSIYKEVNNIVNKNLEKMIQ

Sequences:

>Translated_195_residues
MVTLKTPLSKEIIKKLNVGDIVYLNGIIYTGRDEAHLTILEEGEKPESKIIVEKLKHGAIYHAGPIMKKENNKWKCVAIG
PTTSARMNNMEEEFIKITDISVIVGKGGMKDELLDAFNAHGVVYLGAPGGCAALLANSIVEVKGVYYEELGMPEAFWELE
VKDFGPLIVSMDANGNSIYKEVNNIVNKNLEKMIQ
>Mature_195_residues
MVTLKTPLSKEIIKKLNVGDIVYLNGIIYTGRDEAHLTILEEGEKPESKIIVEKLKHGAIYHAGPIMKKENNKWKCVAIG
PTTSARMNNMEEEFIKITDISVIVGKGGMKDELLDAFNAHGVVYLGAPGGCAALLANSIVEVKGVYYEELGMPEAFWELE
VKDFGPLIVSMDANGNSIYKEVNNIVNKNLEKMIQ

Specific function: Unknown

COG id: COG1838

COG function: function code C; Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789443, Length=195, Percent_Identity=40, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1787897, Length=186, Percent_Identity=35.4838709677419, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1790564, Length=195, Percent_Identity=34.8717948717949, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004647 [H]

Pfam domain/function: PF05683 Fumerase_C [H]

EC number: =4.2.1.2 [H]

Molecular weight: Translated: 21523; Mature: 21523

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLKTPLSKEIIKKLNVGDIVYLNGIIYTGRDEAHLTILEEGEKPESKIIVEKLKHGAI
CEEECCCHHHHHHHHCCCCCEEEECCEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCE
YHAGPIMKKENNKWKCVAIGPTTSARMNNMEEEFIKITDISVIVGKGGMKDELLDAFNAH
EECCCCEECCCCCEEEEEECCCCCHHHCCCHHHHEEEEEEEEEEECCCCHHHHHHHHCCC
GVVYLGAPGGCAALLANSIVEVKGVYYEELGMPEAFWELEVKDFGPLIVSMDANGNSIYK
CEEEEECCCCHHHHHHHHHHHHCCEEHHHCCCCCHHEEEEECCCCCEEEEEECCCCHHHH
EVNNIVNKNLEKMIQ
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MVTLKTPLSKEIIKKLNVGDIVYLNGIIYTGRDEAHLTILEEGEKPESKIIVEKLKHGAI
CEEECCCHHHHHHHHCCCCCEEEECCEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCE
YHAGPIMKKENNKWKCVAIGPTTSARMNNMEEEFIKITDISVIVGKGGMKDELLDAFNAH
EECCCCEECCCCCEEEEEECCCCCHHHCCCHHHHEEEEEEEEEEECCCCHHHHHHHHCCC
GVVYLGAPGGCAALLANSIVEVKGVYYEELGMPEAFWELEVKDFGPLIVSMDANGNSIYK
CEEEEECCCCHHHHHHHHHHHHCCEEHHHCCCCCHHEEEEECCCCCEEEEEECCCCHHHH
EVNNIVNKNLEKMIQ
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]