| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401332
Identifier: 150401332
GI number: 150401332
Start: 931513
End: 932508
Strand: Direct
Name: 150401332
Synonym: Maeo_0905
Alternate gene names: NA
Gene position: 931513-932508 (Clockwise)
Preceding gene: 150401331
Following gene: 150401341
Centisome position: 59.35
GC content: 25.8
Gene sequence:
>996_bases ATGTGGAATTTAGAAACCGACAGAGTAATAAAAGAAATAGAAAAATCAAATGGGAAAAATATAGTATTTCATGCACCAGA AGGTTTAAAATTAGCCGTTGAAAAAGAAATAGAAAAAATAAATGATTATTTTAACAGCACTAAAAATTTAATAATGTGGG GAGCTCCATGCTATGGTGCATGTGATTTATGCGACCATGAATTAAAATATAATAATATTGATTTAATAATTCACTATGGG CATGAGGAGCTCCCATATGCAAAACCAGACATACCAACAATTTTCATACATTGCTACTATATTTATGATGAAATTGAACA AAACAATATATTAAATAAAATAGATGAATATTTACAAAATAATCCAAACACCATAATTACAACCACAATACAATTTAAAG AATTGTTAAAAAAATATAATCCAAATATAATTCTTGGTTGTAGGGCAAATATATCCAATAAACCAAAATCAGAATTAGAA CAGGGAACAGAGAAAGAAACAGAAAACAGCAAAATATTATATATTGGAACGGGGCGATTTCACCCATTAATGTTATGTTA TAAATTTAAAAAATCTGTGAATTTATTTAATCCGACATCCAAAGAGTTTTCTGCCATATCAGAAGAGGAAGTAAATAAAT TTATTAAAAAAAGAATTGGGGCCATTTCAAAATTATTAATAAATCCACCTAAAAAAATTGGAGTTGTTTTATCCACTAAA AAAGGGCAAAATAGAATAAATGTATACAATAAAATAATAAATTTATTAAAAGACAATAATATTGAATATATGCCGATTAT ATTAAATAATGCCTCACCAGATAATTTATTTTATGATGTGTCTGCATATATTATATGTGCCTGTCCTAGAATTGTGTTAG ATGATTATTTAAATTACAATAAAACATTATTAACCCCTAAAGAGTTTGAAATGTATATTAAAAAAGATTTTGAATATGTT TTTGACGAAATATTATTTGATGATTTCGAACCCTAG
Upstream 100 bases:
>100_bases TTAGTAATAATAATGAGTTAGCTTTATTAATATACCCAACTGAAAAAGACCGAAGATTGACTATACTCCATTATTAAAAT ACAGATCGAGTAGGATATTT
Downstream 100 bases:
>100_bases GTTCAATTAACAAAATTATAAAATAATTTTGTCCAATTATAGTCAATCTTCAAAAACTGTCCTATGATAGTCCAAAATAA TTAAATAATTATAGGTTTAA
Product: diphthamide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MWNLETDRVIKEIEKSNGKNIVFHAPEGLKLAVEKEIEKINDYFNSTKNLIMWGAPCYGACDLCDHELKYNNIDLIIHYG HEELPYAKPDIPTIFIHCYYIYDEIEQNNILNKIDEYLQNNPNTIITTTIQFKELLKKYNPNIILGCRANISNKPKSELE QGTEKETENSKILYIGTGRFHPLMLCYKFKKSVNLFNPTSKEFSAISEEEVNKFIKKRIGAISKLLINPPKKIGVVLSTK KGQNRINVYNKIINLLKDNNIEYMPIILNNASPDNLFYDVSAYIICACPRIVLDDYLNYNKTLLTPKEFEMYIKKDFEYV FDEILFDDFEP
Sequences:
>Translated_331_residues MWNLETDRVIKEIEKSNGKNIVFHAPEGLKLAVEKEIEKINDYFNSTKNLIMWGAPCYGACDLCDHELKYNNIDLIIHYG HEELPYAKPDIPTIFIHCYYIYDEIEQNNILNKIDEYLQNNPNTIITTTIQFKELLKKYNPNIILGCRANISNKPKSELE QGTEKETENSKILYIGTGRFHPLMLCYKFKKSVNLFNPTSKEFSAISEEEVNKFIKKRIGAISKLLINPPKKIGVVLSTK KGQNRINVYNKIINLLKDNNIEYMPIILNNASPDNLFYDVSAYIICACPRIVLDDYLNYNKTLLTPKEFEMYIKKDFEYV FDEILFDDFEP >Mature_331_residues MWNLETDRVIKEIEKSNGKNIVFHAPEGLKLAVEKEIEKINDYFNSTKNLIMWGAPCYGACDLCDHELKYNNIDLIIHYG HEELPYAKPDIPTIFIHCYYIYDEIEQNNILNKIDEYLQNNPNTIITTTIQFKELLKKYNPNIILGCRANISNKPKSELE QGTEKETENSKILYIGTGRFHPLMLCYKFKKSVNLFNPTSKEFSAISEEEVNKFIKKRIGAISKLLINPPKKIGVVLSTK KGQNRINVYNKIINLLKDNNIEYMPIILNNASPDNLFYDVSAYIICACPRIVLDDYLNYNKTLLTPKEFEMYIKKDFEYV FDEILFDDFEP
Specific function: Unknown
COG id: COG1736
COG function: function code J; Diphthamide synthase subunit DPH2
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI116686106, Length=344, Percent_Identity=22.9651162790698, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17552166, Length=337, Percent_Identity=26.1127596439169, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322088, Length=350, Percent_Identity=24, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24662841, Length=351, Percent_Identity=26.4957264957265, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI21356957, Length=351, Percent_Identity=26.4957264957265, Blast_Score=96, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016435 - InterPro: IPR002728 - InterPro: IPR022428 [H]
Pfam domain/function: PF01866 Diphthamide_syn [H]
EC number: NA
Molecular weight: Translated: 38600; Mature: 38600
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNLETDRVIKEIEKSNGKNIVFHAPEGLKLAVEKEIEKINDYFNSTKNLIMWGAPCYGA CCCCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCCEEEECCCCCCC CDLCDHELKYNNIDLIIHYGHEELPYAKPDIPTIFIHCYYIYDEIEQNNILNKIDEYLQN HHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEHHHCCHHHHHHHHHHHC NPNTIITTTIQFKELLKKYNPNIILGCRANISNKPKSELEQGTEKETENSKILYIGTGRF CCCEEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCEEEEEECCCC HPLMLCYKFKKSVNLFNPTSKEFSAISEEEVNKFIKKRIGAISKLLINPPKKIGVVLSTK CHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECC KGQNRINVYNKIINLLKDNNIEYMPIILNNASPDNLFYDVSAYIICACPRIVLDDYLNYN CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEHHHHHHHHCHHHHHHHHCCCC KTLLTPKEFEMYIKKDFEYVFDEILFDDFEP CEECCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MWNLETDRVIKEIEKSNGKNIVFHAPEGLKLAVEKEIEKINDYFNSTKNLIMWGAPCYGA CCCCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCCEEEECCCCCCC CDLCDHELKYNNIDLIIHYGHEELPYAKPDIPTIFIHCYYIYDEIEQNNILNKIDEYLQN HHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEHHHCCHHHHHHHHHHHC NPNTIITTTIQFKELLKKYNPNIILGCRANISNKPKSELEQGTEKETENSKILYIGTGRF CCCEEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCEEEEEECCCC HPLMLCYKFKKSVNLFNPTSKEFSAISEEEVNKFIKKRIGAISKLLINPPKKIGVVLSTK CHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECC KGQNRINVYNKIINLLKDNNIEYMPIILNNASPDNLFYDVSAYIICACPRIVLDDYLNYN CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEHHHHHHHHCHHHHHHHHCCCC KTLLTPKEFEMYIKKDFEYVFDEILFDDFEP CEECCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]