Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is nac

Identifier: 150401322

GI number: 150401322

Start: 919988

End: 920380

Strand: Reverse

Name: nac

Synonym: Maeo_0895

Alternate gene names: 150401322

Gene position: 920380-919988 (Counterclockwise)

Preceding gene: 150401325

Following gene: 150401321

Centisome position: 58.64

GC content: 31.04

Gene sequence:

>393_bases
ATGTTTCCGGGAAGAATGAATCCAAAAATGATGAGACAAATGCAAAAAATGATGAGCGATATGGGAATGGATTCCAAAGA
TATTAAGGTATTAAAAATAACCATGGAATTAGAAGATAAAATAATGGTATTTGAAAAACCAAAAGTTCAAGTAATGGATG
TAATGGGAAATAAAACATATACCATAACAGGAAGAGCTAAAAATATCAAAAAAGACGACATAAAAGCTGAGCAGAAAGAA
CAAATAAAAGACGAGGAAGTTAAATTGGATATTACTAAGGAAGATATCGAAATGGTGGTAAATCAGTGCGAAGTTTCCGA
AGAAGAGGCTAAAAAAGTATTGGAAGAATGTAATGGAGACATAGCCGAAGCAATTTTAAAATTAAGTCAATAA

Upstream 100 bases:

>100_bases
TATATTAACTAACAAAATACAAAATAGGGGAGCAAATATAATGAGTGTAAGTTGTTCCCGAACATACTATAAATTATGTA
AATAATAAAAAGGTGAAAAT

Downstream 100 bases:

>100_bases
ATATATAGGTTTAAATCAATTTTTATAATGTCCTTTTATAGTTAATCTTCAATAACTGTCCTTATTCGTCCTATTTCAAT
CGTTTCCTTTGGAAACGATT

Product: nascent polypeptide-associated complex protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MFPGRMNPKMMRQMQKMMSDMGMDSKDIKVLKITMELEDKIMVFEKPKVQVMDVMGNKTYTITGRAKNIKKDDIKAEQKE
QIKDEEVKLDITKEDIEMVVNQCEVSEEEAKKVLEECNGDIAEAILKLSQ

Sequences:

>Translated_130_residues
MFPGRMNPKMMRQMQKMMSDMGMDSKDIKVLKITMELEDKIMVFEKPKVQVMDVMGNKTYTITGRAKNIKKDDIKAEQKE
QIKDEEVKLDITKEDIEMVVNQCEVSEEEAKKVLEECNGDIAEAILKLSQ
>Mature_130_residues
MFPGRMNPKMMRQMQKMMSDMGMDSKDIKVLKITMELEDKIMVFEKPKVQVMDVMGNKTYTITGRAKNIKKDDIKAEQKE
QIKDEEVKLDITKEDIEMVVNQCEVSEEEAKKVLEECNGDIAEAILKLSQ

Specific function: Contacts the emerging nascent chain on the ribosome

COG id: COG1308

COG function: function code K; Transcription factor homologous to NACalpha-BTF3

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 UBA domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NAC_META3 (A6UVF4)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325088.1
- ProteinModelPortal:   A6UVF4
- SMR:   A6UVF4
- STRING:   A6UVF4
- GeneID:   5326700
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0895
- eggNOG:   arNOG12926
- HOGENOM:   HBG541253
- OMA:   NPRKMKQ
- ProtClustDB:   PRK06369
- BioCyc:   MAEO419665:MAEO_0895-MONOMER
- HAMAP:   MF_00814
- InterPro:   IPR005231
- InterPro:   IPR002715
- InterPro:   IPR009060
- InterPro:   IPR000449
- TIGRFAMs:   TIGR00264

Pfam domain/function: PF01849 NAC; PF00627 UBA; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 15051; Mature: 15051

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS51151 NAC_AB; PS50030 UBA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
10.8 %Met     (Translated Protein)
12.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
10.8 %Met     (Mature Protein)
12.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPGRMNPKMMRQMQKMMSDMGMDSKDIKVLKITMELEDKIMVFEKPKVQVMDVMGNKTY
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEECCCEEEEEECCCCEE
TITGRAKNIKKDDIKAEQKEQIKDEEVKLDITKEDIEMVVNQCEVSEEEAKKVLEECNGD
EEECCCCCCCCHHCCHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHCCCH
IAEAILKLSQ
HHHHHHHHCC
>Mature Secondary Structure
MFPGRMNPKMMRQMQKMMSDMGMDSKDIKVLKITMELEDKIMVFEKPKVQVMDVMGNKTY
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEECCCEEEEEECCCCEE
TITGRAKNIKKDDIKAEQKEQIKDEEVKLDITKEDIEMVVNQCEVSEEEAKKVLEECNGD
EEECCCCCCCCHHCCHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHCCCH
IAEAILKLSQ
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA