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The map label for this gene is priA [H]

Identifier: 150401310

GI number: 150401310

Start: 906971

End: 908065

Strand: Direct

Name: priA [H]

Synonym: Maeo_0882

Alternate gene names: 150401310

Gene position: 906971-908065 (Clockwise)

Preceding gene: 150401309

Following gene: 150401311

Centisome position: 57.79

GC content: 26.58

Gene sequence:

>1095_bases
ATGTTTAATGAAAATATAAACATAGAAGAGATAAATCCATTATTTAATGAAATAAAAAAATTATATCGTCAATATTTTGA
ATATTCCATTAAAAGAAAATGGTTAGAAGTTCCAGCAGATATACAATATAGAGAAATTGGATATGGATATTTAAAAAAAG
TAGATGATAGAAATATTGTTTTTAATAATGAAATGGACTATAAAAAATGGGTTTTAAAAAAATCCCCATTTCATTTATAT
AAATCTTTAACATACACGGAGCTCCCTGAAAAAAAAGGAGGGGCGTCTCAAAAAAGATTGATAAAAAGAGAAATAGCCTT
TGATATTGATGTCCATATGACAAAACGATGCACCCACAAAGATGAAGGTTGGATATGTGAGCACTGTTTAGAGGAGGCAA
AAAACCAAACCCATATATTAATTGACGAGTTTTTAATACCTGATTTTGGTTTGTCTCCAAAAGATTTAAGAATTGTTTTC
TCTGGAAATAGGGGGTACCATATATATCTTAATCCAACAGATGAAGAAATAAAAAACACAATAGAGCATTGGAGTAGATA
TCAAAGAAGATATTTTATAGAATATATACTCGGAAAAAATTTAAATTTAAATATCGTAGGTAGTGGTTGGAGAAGAAGAA
TATTAAAACAATTTAAAGAGAAAACCCCCAAATTGGGAACAAAACAATTTGAAAAAAATCCTAATTGGAAGGCCATTATT
GATAAAAAAAGTAATGCCAATAAAATAATGGATAGGATAAATTATACTAAAAATAGGTTGGAATTAGATGAAAAAGTAAT
GGAAGATGATATTAGATTATTGAGAACTATTGGGTCATTGCATGGTTATACTGGTTTTATGGTTAAAGAAATAAAATATC
ATTCTTTGGAAGTTTTTAATCCATTAAATCATGCGGTTTTTTCTAAATTCCATAAAAAATATGAAAAATATTATGTCGTA
AAAATAAATCAAAAATTAGACGATTTAACCATAAATGGGGAAACCTACAACCATAAAAATACAGAAATACCGCCAAGTTA
TTTATTATTTTTATTTGGGCATAATATAGATATGGAAGTTAAAAATATACAATAA

Upstream 100 bases:

>100_bases
ATAGAGGATTTAATGGATGAAGAAATACCATGTCAAACTGCCAAAGCATTCCACAACCCAACCCCAGTAATTGTAAAATT
AAAAAAGATTGTTGAGGAAT

Downstream 100 bases:

>100_bases
ATATAATGTGATAAAATGATATTTATAACGGGAACTGACACAGGAGTAGGAAAAACCTTTGTTTCTAAAATAATCGGAAA
ACACTTAAAATACAAAGAAA

Product: putative DNA primase, small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MFNENINIEEINPLFNEIKKLYRQYFEYSIKRKWLEVPADIQYREIGYGYLKKVDDRNIVFNNEMDYKKWVLKKSPFHLY
KSLTYTELPEKKGGASQKRLIKREIAFDIDVHMTKRCTHKDEGWICEHCLEEAKNQTHILIDEFLIPDFGLSPKDLRIVF
SGNRGYHIYLNPTDEEIKNTIEHWSRYQRRYFIEYILGKNLNLNIVGSGWRRRILKQFKEKTPKLGTKQFEKNPNWKAII
DKKSNANKIMDRINYTKNRLELDEKVMEDDIRLLRTIGSLHGYTGFMVKEIKYHSLEVFNPLNHAVFSKFHKKYEKYYVV
KINQKLDDLTINGETYNHKNTEIPPSYLLFLFGHNIDMEVKNIQ

Sequences:

>Translated_364_residues
MFNENINIEEINPLFNEIKKLYRQYFEYSIKRKWLEVPADIQYREIGYGYLKKVDDRNIVFNNEMDYKKWVLKKSPFHLY
KSLTYTELPEKKGGASQKRLIKREIAFDIDVHMTKRCTHKDEGWICEHCLEEAKNQTHILIDEFLIPDFGLSPKDLRIVF
SGNRGYHIYLNPTDEEIKNTIEHWSRYQRRYFIEYILGKNLNLNIVGSGWRRRILKQFKEKTPKLGTKQFEKNPNWKAII
DKKSNANKIMDRINYTKNRLELDEKVMEDDIRLLRTIGSLHGYTGFMVKEIKYHSLEVFNPLNHAVFSKFHKKYEKYYVV
KINQKLDDLTINGETYNHKNTEIPPSYLLFLFGHNIDMEVKNIQ
>Mature_364_residues
MFNENINIEEINPLFNEIKKLYRQYFEYSIKRKWLEVPADIQYREIGYGYLKKVDDRNIVFNNEMDYKKWVLKKSPFHLY
KSLTYTELPEKKGGASQKRLIKREIAFDIDVHMTKRCTHKDEGWICEHCLEEAKNQTHILIDEFLIPDFGLSPKDLRIVF
SGNRGYHIYLNPTDEEIKNTIEHWSRYQRRYFIEYILGKNLNLNIVGSGWRRRILKQFKEKTPKLGTKQFEKNPNWKAII
DKKSNANKIMDRINYTKNRLELDEKVMEDDIRLLRTIGSLHGYTGFMVKEIKYHSLEVFNPLNHAVFSKFHKKYEKYYVV
KINQKLDDLTINGETYNHKNTEIPPSYLLFLFGHNIDMEVKNIQ

Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]

COG id: COG1467

COG function: function code L; Eukaryotic-type DNA primase, catalytic (small) subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic-type primase small subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002755
- InterPro:   IPR014052 [H]

Pfam domain/function: PF01896 DNA_primase_S [H]

EC number: 2.7.7.-

Molecular weight: Translated: 43767; Mature: 43767

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNENINIEEINPLFNEIKKLYRQYFEYSIKRKWLEVPADIQYREIGYGYLKKVDDRNIV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHCCCHHHHCCCCCCEE
FNNEMDYKKWVLKKSPFHLYKSLTYTELPEKKGGASQKRLIKREIAFDIDVHMTKRCTHK
ECCCCCHHHHHHCCCCHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHEEEEEEHHHHCCCC
DEGWICEHCLEEAKNQTHILIDEFLIPDFGLSPKDLRIVFSGNRGYHIYLNPTDEEIKNT
CCCCHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHH
IEHWSRYQRRYFIEYILGKNLNLNIVGSGWRRRILKQFKEKTPKLGTKQFEKNPNWKAII
HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEE
DKKSNANKIMDRINYTKNRLELDEKVMEDDIRLLRTIGSLHGYTGFMVKEIKYHSLEVFN
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
PLNHAVFSKFHKKYEKYYVVKINQKLDDLTINGETYNHKNTEIPPSYLLFLFGHNIDMEV
HHHHHHHHHHHHHHHEEEEEEECCCCCCEEECCCEECCCCCCCCHHHEEEEECCCCCEEE
KNIQ
CCCC
>Mature Secondary Structure
MFNENINIEEINPLFNEIKKLYRQYFEYSIKRKWLEVPADIQYREIGYGYLKKVDDRNIV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHCCCHHHHCCCCCCEE
FNNEMDYKKWVLKKSPFHLYKSLTYTELPEKKGGASQKRLIKREIAFDIDVHMTKRCTHK
ECCCCCHHHHHHCCCCHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHEEEEEEHHHHCCCC
DEGWICEHCLEEAKNQTHILIDEFLIPDFGLSPKDLRIVFSGNRGYHIYLNPTDEEIKNT
CCCCHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHH
IEHWSRYQRRYFIEYILGKNLNLNIVGSGWRRRILKQFKEKTPKLGTKQFEKNPNWKAII
HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEE
DKKSNANKIMDRINYTKNRLELDEKVMEDDIRLLRTIGSLHGYTGFMVKEIKYHSLEVFN
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
PLNHAVFSKFHKKYEKYYVVKINQKLDDLTINGETYNHKNTEIPPSYLLFLFGHNIDMEV
HHHHHHHHHHHHHHHEEEEEEECCCCCCEEECCCEECCCCCCCCHHHEEEEECCCCCEEE
KNIQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA