Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401305

Identifier: 150401305

GI number: 150401305

Start: 902265

End: 903413

Strand: Direct

Name: 150401305

Synonym: Maeo_0877

Alternate gene names: NA

Gene position: 902265-903413 (Clockwise)

Preceding gene: 150401304

Following gene: 150401306

Centisome position: 57.49

GC content: 28.29

Gene sequence:

>1149_bases
ATGAATGTTAGATTAAGAGATTTTGTAGAAACAGAAATCGGATTTTTTGCAGTGAATACCTATGAGCATCCCAAAGATAG
GATATTTGCTTTTTTAAGATATTTAAATTTAAATGCCGTGGATAATGCAATGGAGATAATAAATAAATATGATTTAAATA
GGCAGGACATACGAAATAACCAATATATAAAAATAACAGACACCTCAAAAACGCACGATATTTTAAAAGACAATTTTCCA
GAATATTTATTTCACGATAAAACAAAAGATATAACACTTCATGCGATTCCAAAAAGCAAAATAATAAAAATACGGACCCC
CCAAAATAGACTAAAAGAAATAATCAATAATCCAACAAATGAATTTGAAATAAAATGTAAAAAGATTGCCGAAATTCTAA
ATAAAAATGGATTGGATTATGGATGTATGGGAGTCTCTGGTTCAACAGTTATAAAATTGAACAATATTAATTCAGATATT
GATTTTGTGATATATGGAATGGAAAATCATAAAAAAGCGAGAGGAATTTTAAAATCTATTTTCGATGAGAAACTTAACAA
ATATTGTGCAAATAATGATAAGGATAACAATAGTGGTAGTAGGAGTAGTAGTGGTAGTAGTAGTATTAAATATAATATTA
AACCGCTTTCAGATGAATTTTGGAAAAAGGCATACAATAAAAGGATAAAAGATGGTACCCTATCTTATGAAGAATTTGTA
TGGCATGAAAAAAGAAAATACAATAGGGGAGCAATAAATGGAACAATGTTTGATTTACTTGCCACGCGGGAATGGAATGA
GATTAATATTAATTATGGAGATTATATTTATAAAAATATGGGATTTATTGAGATAGAAGGCACAATAACCAATGATAAAT
ATATGTTGGACAATCCTGCAATATATAATATTGAAAATGTAAAAATAACCAATTTGGAATTAAATAAAAAAATAAATAAA
AAAATAAATCCAAATAGCATAAAAGAAATAGCTTCTTTTACCCACACCTACGCAGGTCAGGCATTTGAGGGGGAAACCGT
AGTAGTAAGGGGAAAATTGGAAACCGTCAGTAGCAAAAACGAAAATTATAATAGAATTGTTGTAGGGACATCAAGAGAGG
CGCTTAACGAATATATTAAATTACTTTAA

Upstream 100 bases:

>100_bases
ATTTTTATAATATATTTTATAATATATTAAATATCAAATTTAAATTCCAATTTTAATATTTTTTTATTTTTAGTATGTTA
AATATGTCGGTGAATAAACA

Downstream 100 bases:

>100_bases
TATGGTTAAATTTTTAGGAGCTCCTTACATTCGATATATCAACTATATTATGTAAAAAGTTCTCGAACACATCATAATTT
TTTTAGATTGGACAAACATA

Product: DNA polymerase, beta-like region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MNVRLRDFVETEIGFFAVNTYEHPKDRIFAFLRYLNLNAVDNAMEIINKYDLNRQDIRNNQYIKITDTSKTHDILKDNFP
EYLFHDKTKDITLHAIPKSKIIKIRTPQNRLKEIINNPTNEFEIKCKKIAEILNKNGLDYGCMGVSGSTVIKLNNINSDI
DFVIYGMENHKKARGILKSIFDEKLNKYCANNDKDNNSGSRSSSGSSSIKYNIKPLSDEFWKKAYNKRIKDGTLSYEEFV
WHEKRKYNRGAINGTMFDLLATREWNEININYGDYIYKNMGFIEIEGTITNDKYMLDNPAIYNIENVKITNLELNKKINK
KINPNSIKEIASFTHTYAGQAFEGETVVVRGKLETVSSKNENYNRIVVGTSREALNEYIKLL

Sequences:

>Translated_382_residues
MNVRLRDFVETEIGFFAVNTYEHPKDRIFAFLRYLNLNAVDNAMEIINKYDLNRQDIRNNQYIKITDTSKTHDILKDNFP
EYLFHDKTKDITLHAIPKSKIIKIRTPQNRLKEIINNPTNEFEIKCKKIAEILNKNGLDYGCMGVSGSTVIKLNNINSDI
DFVIYGMENHKKARGILKSIFDEKLNKYCANNDKDNNSGSRSSSGSSSIKYNIKPLSDEFWKKAYNKRIKDGTLSYEEFV
WHEKRKYNRGAINGTMFDLLATREWNEININYGDYIYKNMGFIEIEGTITNDKYMLDNPAIYNIENVKITNLELNKKINK
KINPNSIKEIASFTHTYAGQAFEGETVVVRGKLETVSSKNENYNRIVVGTSREALNEYIKLL
>Mature_382_residues
MNVRLRDFVETEIGFFAVNTYEHPKDRIFAFLRYLNLNAVDNAMEIINKYDLNRQDIRNNQYIKITDTSKTHDILKDNFP
EYLFHDKTKDITLHAIPKSKIIKIRTPQNRLKEIINNPTNEFEIKCKKIAEILNKNGLDYGCMGVSGSTVIKLNNINSDI
DFVIYGMENHKKARGILKSIFDEKLNKYCANNDKDNNSGSRSSSGSSSIKYNIKPLSDEFWKKAYNKRIKDGTLSYEEFV
WHEKRKYNRGAINGTMFDLLATREWNEININYGDYIYKNMGFIEIEGTITNDKYMLDNPAIYNIENVKITNLELNKKINK
KINPNSIKEIASFTHTYAGQAFEGETVVVRGKLETVSSKNENYNRIVVGTSREALNEYIKLL

Specific function: Unknown

COG id: COG1665

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002934 [H]

Pfam domain/function: PF01909 NTP_transf_2 [H]

EC number: NA

Molecular weight: Translated: 44334; Mature: 44334

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRLRDFVETEIGFFAVNTYEHPKDRIFAFLRYLNLNAVDNAMEIINKYDLNRQDIRNN
CCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCC
QYIKITDTSKTHDILKDNFPEYLFHDKTKDITLHAIPKSKIIKIRTPQNRLKEIINNPTN
CEEEEECCCCHHHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCC
EFEIKCKKIAEILNKNGLDYGCMGVSGSTVIKLNNINSDIDFVIYGMENHKKARGILKSI
CEEEEHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHH
FDEKLNKYCANNDKDNNSGSRSSSGSSSIKYNIKPLSDEFWKKAYNKRIKDGTLSYEEFV
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHH
WHEKRKYNRGAINGTMFDLLATREWNEININYGDYIYKNMGFIEIEGTITNDKYMLDNPA
HHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHCCCCEEEEEEEEECCEEEECCCC
IYNIENVKITNLELNKKINKKINPNSIKEIASFTHTYAGQAFEGETVVVRGKLETVSSKN
EEEECCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCCC
ENYNRIVVGTSREALNEYIKLL
CCCCEEEEECCHHHHHHHHHCC
>Mature Secondary Structure
MNVRLRDFVETEIGFFAVNTYEHPKDRIFAFLRYLNLNAVDNAMEIINKYDLNRQDIRNN
CCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCC
QYIKITDTSKTHDILKDNFPEYLFHDKTKDITLHAIPKSKIIKIRTPQNRLKEIINNPTN
CEEEEECCCCHHHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCC
EFEIKCKKIAEILNKNGLDYGCMGVSGSTVIKLNNINSDIDFVIYGMENHKKARGILKSI
CEEEEHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHH
FDEKLNKYCANNDKDNNSGSRSSSGSSSIKYNIKPLSDEFWKKAYNKRIKDGTLSYEEFV
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHH
WHEKRKYNRGAINGTMFDLLATREWNEININYGDYIYKNMGFIEIEGTITNDKYMLDNPA
HHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHCCCCEEEEEEEEECCEEEECCCC
IYNIENVKITNLELNKKINKKINPNSIKEIASFTHTYAGQAFEGETVVVRGKLETVSSKN
EEEECCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCCC
ENYNRIVVGTSREALNEYIKLL
CCCCEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]