| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is leuA2 [H]
Identifier: 150401277
GI number: 150401277
Start: 876723
End: 878267
Strand: Direct
Name: leuA2 [H]
Synonym: Maeo_0849
Alternate gene names: 150401277
Gene position: 876723-878267 (Clockwise)
Preceding gene: 150401276
Following gene: 150401278
Centisome position: 55.86
GC content: 33.59
Gene sequence:
>1545_bases ATGGATACATATGGCTCAACCAACGATATAATTAAAAATTCAATTAAAGACTTAAATCTACCTGAAAAAATTAAAATATT TGATACTACCCTAAGGGATGGAGAACAAACCCCAGGAGTATCTCTAACACCTGATGAAAAGGTAGAAATTGCCATTAATC TAAATAATCTTGGAGTAGATATAATAGAGGCAGGATTTCCAATATCTTCCCCTGGGGAGCAGGAGGCAATTAAAAAAATA ACTTCCTTAAATCTAAATGCTGAAATTTGCGGACTTGCAAGAGCTGTTAAAAAAGATATTGATATAGCAGTAGATTGTGG CGTGGATAGCATACATACATTTATAGCAACATCCCCACTACATAGAAAATATAAATTAAAAATGGATAAGGAACAAATAA TAAATAAAGCAGTTGAATCAATTGAATATATAAAAGAAAGAGGGCTAAAAGTAGAATTCTCAGCCGAGGACGCCACACGA ACAGAATTAGATTATTTGATTGAAGTTTATAAAAATGCCGTAGATGCAGGAGCAGATAGAATAAATGTTCCAGATACCGT TGGAGTAATGATTCCAAGGGCTATGACATATTTAATAAGCGAAATAAAAAAAGAAATAAATGTTCCAATTGCCGTTCATT GCCATAATGATTTTGGGCTTTCTGTGGCTAACTCAGTAGGGGCAGTCGAAGGAGGGGCAGAGCAAATTCACTGCACAATA AACGGATTAGGTGAAAGAGCTGGAAACGCATCTCTTGAAGAAGCCGTAATGTCTTTAAAAATGATTTATGGAATAGAAAG TAATATTAAAACTGAAAAATTAACAGAAATATCTAATTTAGTATCAAATCTTACAGGAATAAAAAACCAACCAAATAAGG CAATAGTTGGAGAAAATTCATTTGCTCATGAAAGTGGAATTCATGCCCATGGAGTTTTAGCTCATGCCCTAACCTACGAA CCTATTGACCCAGAAATAGTAGGGCAAAAAAGAAAAATCATACTTGGAAAACATACTGGAACTCATGCAATATTATCCAA GTTAAAGGAACTTAATTATATTGTGGGAGAAAATATTACGGAAGAACAATTTAATGAAATCTCCAAAAGAATAAAAGATG CAGGAGATAAAGGAAAAATGATAACTGACTTAGATGTTGTTGCAATAGTGGATGATATTACAGATAGAACCGCAGAATCA GAAAGAGCTGTTAATTTAGAACAAATAGCCGTAATGACTGGAAATAAAATAATACCTACTGCAAGTGTCTCTTTAATCAT GAATAATGAGAGATATACAACTTCAAAAGTAGGAGTTGGACCTGTTGATGCAGCTTTAAAAGCCATTTGTTCCATCACTG GCGAAAAAATAAAAATAAAAGAATATCATATAAATGCCATTACAGGGGGAACTGATGCATTGGCAGAAGTTATTGTTATA TTAGAAGGGCAGGGCAGGGAAATTACTGCAAAGGCTGCAAATGAAGACATAGTTAGGGCATCAGTTGAGGCTATTATTAA CGGAATAAATAAAATAATGAAATAA
Upstream 100 bases:
>100_bases TTACAATTAATTATTAGCTGTTAATTATTAGCGAATTTATTTTTATTTGATTTATATATTATATTACTAATATTTACTAC CCTCATAATCTGGTGAAATT
Downstream 100 bases:
>100_bases ATTATATAATATTTGGGAGCTCCCAAAAATGGGAGCTCCTTTATATATTAAATATTAATAATAAAAATATTAAAAATGAA AAAGGCGATAAAATGAAAAT
Product: 2-isopropylmalate synthase
Products: NA
Alternate protein names: Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2 [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MDTYGSTNDIIKNSIKDLNLPEKIKIFDTTLRDGEQTPGVSLTPDEKVEIAINLNNLGVDIIEAGFPISSPGEQEAIKKI TSLNLNAEICGLARAVKKDIDIAVDCGVDSIHTFIATSPLHRKYKLKMDKEQIINKAVESIEYIKERGLKVEFSAEDATR TELDYLIEVYKNAVDAGADRINVPDTVGVMIPRAMTYLISEIKKEINVPIAVHCHNDFGLSVANSVGAVEGGAEQIHCTI NGLGERAGNASLEEAVMSLKMIYGIESNIKTEKLTEISNLVSNLTGIKNQPNKAIVGENSFAHESGIHAHGVLAHALTYE PIDPEIVGQKRKIILGKHTGTHAILSKLKELNYIVGENITEEQFNEISKRIKDAGDKGKMITDLDVVAIVDDITDRTAES ERAVNLEQIAVMTGNKIIPTASVSLIMNNERYTTSKVGVGPVDAALKAICSITGEKIKIKEYHINAITGGTDALAEVIVI LEGQGREITAKAANEDIVRASVEAIINGINKIMK
Sequences:
>Translated_514_residues MDTYGSTNDIIKNSIKDLNLPEKIKIFDTTLRDGEQTPGVSLTPDEKVEIAINLNNLGVDIIEAGFPISSPGEQEAIKKI TSLNLNAEICGLARAVKKDIDIAVDCGVDSIHTFIATSPLHRKYKLKMDKEQIINKAVESIEYIKERGLKVEFSAEDATR TELDYLIEVYKNAVDAGADRINVPDTVGVMIPRAMTYLISEIKKEINVPIAVHCHNDFGLSVANSVGAVEGGAEQIHCTI NGLGERAGNASLEEAVMSLKMIYGIESNIKTEKLTEISNLVSNLTGIKNQPNKAIVGENSFAHESGIHAHGVLAHALTYE PIDPEIVGQKRKIILGKHTGTHAILSKLKELNYIVGENITEEQFNEISKRIKDAGDKGKMITDLDVVAIVDDITDRTAES ERAVNLEQIAVMTGNKIIPTASVSLIMNNERYTTSKVGVGPVDAALKAICSITGEKIKIKEYHINAITGGTDALAEVIVI LEGQGREITAKAANEDIVRASVEAIINGINKIMK >Mature_514_residues MDTYGSTNDIIKNSIKDLNLPEKIKIFDTTLRDGEQTPGVSLTPDEKVEIAINLNNLGVDIIEAGFPISSPGEQEAIKKI TSLNLNAEICGLARAVKKDIDIAVDCGVDSIHTFIATSPLHRKYKLKMDKEQIINKAVESIEYIKERGLKVEFSAEDATR TELDYLIEVYKNAVDAGADRINVPDTVGVMIPRAMTYLISEIKKEINVPIAVHCHNDFGLSVANSVGAVEGGAEQIHCTI NGLGERAGNASLEEAVMSLKMIYGIESNIKTEKLTEISNLVSNLTGIKNQPNKAIVGENSFAHESGIHAHGVLAHALTYE PIDPEIVGQKRKIILGKHTGTHAILSKLKELNYIVGENITEEQFNEISKRIKDAGDKGKMITDLDVVAIVDDITDRTAES ERAVNLEQIAVMTGNKIIPTASVSLIMNNERYTTSKVGVGPVDAALKAICSITGEKIKIKEYHINAITGGTDALAEVIVI LEGQGREITAKAANEDIVRASVEAIINGINKIMK
Specific function: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI62198232, Length=288, Percent_Identity=25, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI109150422, Length=299, Percent_Identity=24.0802675585284, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI109150427, Length=299, Percent_Identity=24.0802675585284, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1786261, Length=507, Percent_Identity=36.4891518737673, Blast_Score=312, Evalue=3e-86, Organism=Saccharomyces cerevisiae, GI6320071, Length=377, Percent_Identity=35.5437665782493, Blast_Score=220, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6320019, Length=370, Percent_Identity=35.4054054054054, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6324225, Length=544, Percent_Identity=22.2426470588235, Blast_Score=107, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6324682, Length=565, Percent_Identity=22.4778761061947, Blast_Score=105, Evalue=2e-23,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013709 - InterPro: IPR002034 - InterPro: IPR013785 - InterPro: IPR011830 - InterPro: IPR000891 [H]
Pfam domain/function: PF00682 HMGL-like; PF08502 LeuA_dimer [H]
EC number: =2.3.3.13 [H]
Molecular weight: Translated: 55736; Mature: 55736
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00815 AIPM_HOMOCIT_SYNTH_1 ; PS00816 AIPM_HOMOCIT_SYNTH_2 ; PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTYGSTNDIIKNSIKDLNLPEKIKIFDTTLRDGEQTPGVSLTPDEKVEIAINLNNLGVD CCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEE IIEAGFPISSPGEQEAIKKITSLNLNAEICGLARAVKKDIDIAVDCGVDSIHTFIATSPL EEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCC HRKYKLKMDKEQIINKAVESIEYIKERGLKVEFSAEDATRTELDYLIEVYKNAVDAGADR CCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC INVPDTVGVMIPRAMTYLISEIKKEINVPIAVHCHNDFGLSVANSVGAVEGGAEQIHCTI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEE NGLGERAGNASLEEAVMSLKMIYGIESNIKTEKLTEISNLVSNLTGIKNQPNKAIVGENS ECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCC FAHESGIHAHGVLAHALTYEPIDPEIVGQKRKIILGKHTGTHAILSKLKELNYIVGENIT CCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC EEQFNEISKRIKDAGDKGKMITDLDVVAIVDDITDRTAESERAVNLEQIAVMTGNKIIPT HHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCHHHCCCHHHEEEECCCEECCC ASVSLIMNNERYTTSKVGVGPVDAALKAICSITGEKIKIKEYHINAITGGTDALAEVIVI CEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHEEEEE LEGQGREITAKAANEDIVRASVEAIINGINKIMK EECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDTYGSTNDIIKNSIKDLNLPEKIKIFDTTLRDGEQTPGVSLTPDEKVEIAINLNNLGVD CCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEE IIEAGFPISSPGEQEAIKKITSLNLNAEICGLARAVKKDIDIAVDCGVDSIHTFIATSPL EEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCC HRKYKLKMDKEQIINKAVESIEYIKERGLKVEFSAEDATRTELDYLIEVYKNAVDAGADR CCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC INVPDTVGVMIPRAMTYLISEIKKEINVPIAVHCHNDFGLSVANSVGAVEGGAEQIHCTI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEE NGLGERAGNASLEEAVMSLKMIYGIESNIKTEKLTEISNLVSNLTGIKNQPNKAIVGENS ECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCC FAHESGIHAHGVLAHALTYEPIDPEIVGQKRKIILGKHTGTHAILSKLKELNYIVGENIT CCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC EEQFNEISKRIKDAGDKGKMITDLDVVAIVDDITDRTAESERAVNLEQIAVMTGNKIIPT HHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCHHHCCCHHHEEEECCCEECCC ASVSLIMNNERYTTSKVGVGPVDAALKAICSITGEKIKIKEYHINAITGGTDALAEVIVI CEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHEEEEE LEGQGREITAKAANEDIVRASVEAIINGINKIMK EECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]