Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150401272

Identifier: 150401272

GI number: 150401272

Start: 871651

End: 872667

Strand: Reverse

Name: 150401272

Synonym: Maeo_0844

Alternate gene names: NA

Gene position: 872667-871651 (Counterclockwise)

Preceding gene: 150401279

Following gene: 150401271

Centisome position: 55.6

GC content: 30.58

Gene sequence:

>1017_bases
ATGGATGCATGGATTGACTTTACTAATGCCCCTCATGTTCATTACTTTTCACAATTAATAAATAAATTTGAGAAGGAAGG
TATTGAATATATTATTACGCTAAGAGATTTTAAAAATTTAGAAAATATTGTTAATTTATATAATTACACATCAAAACCAA
TTTTAATAGGGAAACACGGAGGAACTACGGAAGAAAAACTTATAAATTCCACAGAACGAATTATTGGCTTAACAAAAGTA
ATAAAAGACAACAAACCAAAAGTTGCAATTGCAAAACATTCTGTGGAGCTCCCTCGGGTAGCCTTTGGACTTGGCATTCC
ATCAATTTTTACAGTAGATAATGAGTATGCCGAAGCCCAAAATAGATTAACTATGCCATTGGTAAATGATTTAATAGTTC
CAGAAGGAATAAATAAAACAATGTTAAGGAAACAGGGGGGAAGGGATTTTATTTCTTTTAATGGAACATGTGAAGTTGCA
AATATTAACTCCCGATTAAATGGAATAATTCCAATTAATAAAAATATCGTTAATGAATTAAACCTAAATCCTGAAATGCC
AATAATTATAATGAGGTCTTGCCCTAATTCTTCATACTGCAATGGAAATGGAGATATTATTCCAAAAATCATTGAAAAAT
TAAATAAAAAAATAGATTGTAATATTGTAGCATTCTCGCGAACAGATGCCCAGAAAGAAAAATATAAATCACTAAATGCC
GTAGTGCCCCATAGTATTGATGCAATATCTCTAATATATCATGCCGATGCTATGATTGGAGCAGGAGGAACTATGAATAG
GGAATCCGCAGTTATGGGGATTCCTACGGTTTCATGCTACCCTCAAAATATTTTGGGCGTAGATACATACCTTATGAAAA
AAAATCTCATGATACATACGAAATCAATAGATAAAATAGTAAAATATGTAATTGACAATATTGGTAAGAAAAATAAAATG
CCAAAATTAGAGGACCCAACTAATTTAATTTTTGAAAAAATTTGTGAGTATTTATAG

Upstream 100 bases:

>100_bases
ATTGATTATAGTTTTCGAATATATAATAAATATGAGTTAAATATTTTATTAATTTATTATTAATTTATTATTTTTACAGT
TATTAATTATCGGTGGTTAA

Downstream 100 bases:

>100_bases
TCTGTTCGGAATGTATGTTCATTACGGGTTAAAAAAATCTTAAAGTATTTTAATGGAAATTTAAACTAATATATATTTTA
CATACCCATTAGTGCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MDAWIDFTNAPHVHYFSQLINKFEKEGIEYIITLRDFKNLENIVNLYNYTSKPILIGKHGGTTEEKLINSTERIIGLTKV
IKDNKPKVAIAKHSVELPRVAFGLGIPSIFTVDNEYAEAQNRLTMPLVNDLIVPEGINKTMLRKQGGRDFISFNGTCEVA
NINSRLNGIIPINKNIVNELNLNPEMPIIIMRSCPNSSYCNGNGDIIPKIIEKLNKKIDCNIVAFSRTDAQKEKYKSLNA
VVPHSIDAISLIYHADAMIGAGGTMNRESAVMGIPTVSCYPQNILGVDTYLMKKNLMIHTKSIDKIVKYVIDNIGKKNKM
PKLEDPTNLIFEKICEYL

Sequences:

>Translated_338_residues
MDAWIDFTNAPHVHYFSQLINKFEKEGIEYIITLRDFKNLENIVNLYNYTSKPILIGKHGGTTEEKLINSTERIIGLTKV
IKDNKPKVAIAKHSVELPRVAFGLGIPSIFTVDNEYAEAQNRLTMPLVNDLIVPEGINKTMLRKQGGRDFISFNGTCEVA
NINSRLNGIIPINKNIVNELNLNPEMPIIIMRSCPNSSYCNGNGDIIPKIIEKLNKKIDCNIVAFSRTDAQKEKYKSLNA
VVPHSIDAISLIYHADAMIGAGGTMNRESAVMGIPTVSCYPQNILGVDTYLMKKNLMIHTKSIDKIVKYVIDNIGKKNKM
PKLEDPTNLIFEKICEYL
>Mature_338_residues
MDAWIDFTNAPHVHYFSQLINKFEKEGIEYIITLRDFKNLENIVNLYNYTSKPILIGKHGGTTEEKLINSTERIIGLTKV
IKDNKPKVAIAKHSVELPRVAFGLGIPSIFTVDNEYAEAQNRLTMPLVNDLIVPEGINKTMLRKQGGRDFISFNGTCEVA
NINSRLNGIIPINKNIVNELNLNPEMPIIIMRSCPNSSYCNGNGDIIPKIIEKLNKKIDCNIVAFSRTDAQKEKYKSLNA
VVPHSIDAISLIYHADAMIGAGGTMNRESAVMGIPTVSCYPQNILGVDTYLMKKNLMIHTKSIDKIVKYVIDNIGKKNKM
PKLEDPTNLIFEKICEYL

Specific function: Unknown

COG id: COG1817

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007152 [H]

Pfam domain/function: PF04007 DUF354 [H]

EC number: NA

Molecular weight: Translated: 37955; Mature: 37955

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAWIDFTNAPHVHYFSQLINKFEKEGIEYIITLRDFKNLENIVNLYNYTSKPILIGKHG
CCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEECCC
GTTEEKLINSTERIIGLTKVIKDNKPKVAIAKHSVELPRVAFGLGIPSIFTVDNEYAEAQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCEEEEECCHHHHHH
NRLTMPLVNDLIVPEGINKTMLRKQGGRDFISFNGTCEVANINSRLNGIIPINKNIVNEL
CCEECHHHHHCCCCCCCCHHHHHHCCCCCEEEECCEEEEEECCCCCCEEEECCHHHHHHC
NLNPEMPIIIMRSCPNSSYCNGNGDIIPKIIEKLNKKIDCNIVAFSRTDAQKEKYKSLNA
CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCC
VVPHSIDAISLIYHADAMIGAGGTMNRESAVMGIPTVSCYPQNILGVDTYLMKKNLMIHT
CCCCCCHHHHHEEHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHCHHHHHHHCCCEEEE
KSIDKIVKYVIDNIGKKNKMPKLEDPTNLIFEKICEYL
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MDAWIDFTNAPHVHYFSQLINKFEKEGIEYIITLRDFKNLENIVNLYNYTSKPILIGKHG
CCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEECCC
GTTEEKLINSTERIIGLTKVIKDNKPKVAIAKHSVELPRVAFGLGIPSIFTVDNEYAEAQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCEEEEECCHHHHHH
NRLTMPLVNDLIVPEGINKTMLRKQGGRDFISFNGTCEVANINSRLNGIIPINKNIVNEL
CCEECHHHHHCCCCCCCCHHHHHHCCCCCEEEECCEEEEEECCCCCCEEEECCHHHHHHC
NLNPEMPIIIMRSCPNSSYCNGNGDIIPKIIEKLNKKIDCNIVAFSRTDAQKEKYKSLNA
CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCC
VVPHSIDAISLIYHADAMIGAGGTMNRESAVMGIPTVSCYPQNILGVDTYLMKKNLMIHT
CCCCCCHHHHHEEHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHCHHHHHHHCCCEEEE
KSIDKIVKYVIDNIGKKNKMPKLEDPTNLIFEKICEYL
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]