| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401270
Identifier: 150401270
GI number: 150401270
Start: 869497
End: 870711
Strand: Direct
Name: 150401270
Synonym: Maeo_0842
Alternate gene names: NA
Gene position: 869497-870711 (Clockwise)
Preceding gene: 150401269
Following gene: 150401273
Centisome position: 55.4
GC content: 30.95
Gene sequence:
>1215_bases ATGTACGACTCAATAAATTATAATGTAGAAACATACAGAGTTTGCTCTCCCGAAGAAACTTGGAACAAGATAAAATCATT AACAAAAAATATAAATATTGAAATTTTAGAAAGAATTGACAATTTAGATAGAATTGGAATTCCAGTTTATTCTGCAAAAA GAATTGTAAAAAGCCCCGAAAATGAAAATGATACAAAAGAAAAAATAGTAAAATATCATTATGGTAAAGGAGCTACGGAC ATTCAAGCAAAGGTTTCGGCAATAATGGAGGCAATTGAAAGATATTCCATGGGATGCCTTAATGAACCCGCTACCAAAAA TCCAGAAAATCCAATAGATTTAAAGGAGTTGGTGCTATCCAAAGAATCATATAAAAATATAAATCAAATAAATAATAATA TAAATAATATTGAATGGACAGCCTGCCATGACATAATTAACGATGAAATTATCGATATTCCTGTAAATGCCGTATGCCAC CCCACAGAGGGAAAGCTTTTTAAAAGTAATACTAATGGAATAGCATCAGGAAACACAAAAGATGAAGCGATTTTCCACGG CACCCTTGAATTAATAGAAAGAGATTCTTGGAGTATAGCCGAAATATACAATAAAACCCACACAAAAATAAACACAGATG GGGCAAAAAATCCAATAATACACGAATTAATGGATAAATTTAAAGATGCCAATATAAATGTAGTTTTAAAGGATTTAACT AGTGATATTGGTATCCCCACAGTTGCCGCCGTATCTGATGAACCTGTTTTAAAAGACCCTGCTTTATTGTGTATTGGAGT AGGTTGCCACATTAATCCAGAAATAGCAGTAATTAGGGCACTTACAGAAGTAATTCAAAGTAGGGCCACCCAAATACAAA ATAAGAGAGACGATACAATTAGAGGAGATATTGTACGAAAGGTCCAATATGATAGACTGATAAAAGTCCATAGAAAATGG TATGGGCATAAAGATGAGATAAATATAGAGGAGCTCCCAAATAATGCAAAATTAAATTTAAAAAAGGACCTAAATGTCAT TAAAAATAAATTAATTGATACGGGATTCGATAAATTAATTGTTGCTGATTTGAAAAAACCAGAAGTTGGAATTGATGTTG TTAGAATAATAATTCCTAAAATAGAAGTTTATTGTATGGATAGAGATAGAATTTCACCTTGGATAAGAGAAAGAATGAAA AATATTAAAAATTAA
Upstream 100 bases:
>100_bases TGAATAATTATAAATAAATATAAATAAATATAAATAGGTATTATTAATAGATATTAATAGATATTTAATATAATAATAAA TTAAAATTATCCGTGGTAAA
Downstream 100 bases:
>100_bases AAATTTACAAAATCTAATATTTTGAATTCAAAATCTTCGATTTTGTACAAAATCCTAAAAGGATTTTGAATTCAAAAGCT CTGCTTTTGTTCAATATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MYDSINYNVETYRVCSPEETWNKIKSLTKNINIEILERIDNLDRIGIPVYSAKRIVKSPENENDTKEKIVKYHYGKGATD IQAKVSAIMEAIERYSMGCLNEPATKNPENPIDLKELVLSKESYKNINQINNNINNIEWTACHDIINDEIIDIPVNAVCH PTEGKLFKSNTNGIASGNTKDEAIFHGTLELIERDSWSIAEIYNKTHTKINTDGAKNPIIHELMDKFKDANINVVLKDLT SDIGIPTVAAVSDEPVLKDPALLCIGVGCHINPEIAVIRALTEVIQSRATQIQNKRDDTIRGDIVRKVQYDRLIKVHRKW YGHKDEINIEELPNNAKLNLKKDLNVIKNKLIDTGFDKLIVADLKKPEVGIDVVRIIIPKIEVYCMDRDRISPWIRERMK NIKN
Sequences:
>Translated_404_residues MYDSINYNVETYRVCSPEETWNKIKSLTKNINIEILERIDNLDRIGIPVYSAKRIVKSPENENDTKEKIVKYHYGKGATD IQAKVSAIMEAIERYSMGCLNEPATKNPENPIDLKELVLSKESYKNINQINNNINNIEWTACHDIINDEIIDIPVNAVCH PTEGKLFKSNTNGIASGNTKDEAIFHGTLELIERDSWSIAEIYNKTHTKINTDGAKNPIIHELMDKFKDANINVVLKDLT SDIGIPTVAAVSDEPVLKDPALLCIGVGCHINPEIAVIRALTEVIQSRATQIQNKRDDTIRGDIVRKVQYDRLIKVHRKW YGHKDEINIEELPNNAKLNLKKDLNVIKNKLIDTGFDKLIVADLKKPEVGIDVVRIIIPKIEVYCMDRDRISPWIRERMK NIKN >Mature_404_residues MYDSINYNVETYRVCSPEETWNKIKSLTKNINIEILERIDNLDRIGIPVYSAKRIVKSPENENDTKEKIVKYHYGKGATD IQAKVSAIMEAIERYSMGCLNEPATKNPENPIDLKELVLSKESYKNINQINNNINNIEWTACHDIINDEIIDIPVNAVCH PTEGKLFKSNTNGIASGNTKDEAIFHGTLELIERDSWSIAEIYNKTHTKINTDGAKNPIIHELMDKFKDANINVVLKDLT SDIGIPTVAAVSDEPVLKDPALLCIGVGCHINPEIAVIRALTEVIQSRATQIQNKRDDTIRGDIVRKVQYDRLIKVHRKW YGHKDEINIEELPNNAKLNLKKDLNVIKNKLIDTGFDKLIVADLKKPEVGIDVVRIIIPKIEVYCMDRDRISPWIRERMK NIKN
Specific function: Unknown
COG id: COG1944
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0142 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017667 - InterPro: IPR003776 [H]
Pfam domain/function: PF02624 YcaO [H]
EC number: NA
Molecular weight: Translated: 46040; Mature: 46040
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDSINYNVETYRVCSPEETWNKIKSLTKNINIEILERIDNLDRIGIPVYSAKRIVKSPE CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCHHCCCCHHHHHHHHCCCC NENDTKEKIVKYHYGKGATDIQAKVSAIMEAIERYSMGCLNEPATKNPENPIDLKELVLS CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH KESYKNINQINNNINNIEWTACHDIINDEIIDIPVNAVCHPTEGKLFKSNTNGIASGNTK HHHHHHHHHHCCCCCCEEHHHHHHHHCCCEEEECCCCEEECCCCCEEECCCCCCCCCCCC DEAIFHGTLELIERDSWSIAEIYNKTHTKINTDGAKNPIIHELMDKFKDANINVVLKDLT CHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCCCCCCHHHHHHHHHHCCCCCEEEEEHHH SDIGIPTVAAVSDEPVLKDPALLCIGVGCHINPEIAVIRALTEVIQSRATQIQNKRDDTI HCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH RGDIVRKVQYDRLIKVHRKWYGHKDEINIEELPNNAKLNLKKDLNVIKNKLIDTGFDKLI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHEE VADLKKPEVGIDVVRIIIPKIEVYCMDRDRISPWIRERMKNIKN ECCCCCCCCCHHHHHHHHCCEEEEEECCHHCCHHHHHHHHHCCC >Mature Secondary Structure MYDSINYNVETYRVCSPEETWNKIKSLTKNINIEILERIDNLDRIGIPVYSAKRIVKSPE CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCHHCCCCHHHHHHHHCCCC NENDTKEKIVKYHYGKGATDIQAKVSAIMEAIERYSMGCLNEPATKNPENPIDLKELVLS CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH KESYKNINQINNNINNIEWTACHDIINDEIIDIPVNAVCHPTEGKLFKSNTNGIASGNTK HHHHHHHHHHCCCCCCEEHHHHHHHHCCCEEEECCCCEEECCCCCEEECCCCCCCCCCCC DEAIFHGTLELIERDSWSIAEIYNKTHTKINTDGAKNPIIHELMDKFKDANINVVLKDLT CHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCCCCCCHHHHHHHHHHCCCCCEEEEEHHH SDIGIPTVAAVSDEPVLKDPALLCIGVGCHINPEIAVIRALTEVIQSRATQIQNKRDDTI HCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH RGDIVRKVQYDRLIKVHRKWYGHKDEINIEELPNNAKLNLKKDLNVIKNKLIDTGFDKLI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHEE VADLKKPEVGIDVVRIIIPKIEVYCMDRDRISPWIRERMKNIKN ECCCCCCCCCHHHHHHHHCCEEEEEECCHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]