| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is purM [H]
Identifier: 150401239
GI number: 150401239
Start: 838565
End: 839620
Strand: Reverse
Name: purM [H]
Synonym: Maeo_0810
Alternate gene names: 150401239
Gene position: 839620-838565 (Counterclockwise)
Preceding gene: 150401240
Following gene: 150401236
Centisome position: 53.5
GC content: 32.77
Gene sequence:
>1056_bases ATGATAACATATAAGGATGCAGGAGTAGATATTTACAAAGAAGATAAAATAATAAAGGCATTGGTATCACAAATAAAATT TAAAAGAACAGACGACATAAAACCGGCCGAGGAATTGGCAGGACATTATGCTGGTGCAATTGAATTTGGGAATTATTATC TTGTGCTATGTACCGATGGAGTAGGTAGTAAAATGATAGTGGCAGAAATGGCAGATAAATTTGATACTGTGCCTATTGAT ATGATAGCTATGAATGTGAATGATGCTATTTGTATTGGGGCCGAGCCTGTTGCTCTTGTGGATTATATGGCTGTTGAGGA CATTACAGAGGACATGGCAAAACAAATTGGAAAAGGATTAAATGAAGGATTAAAAGAATCAAATATAAATATAATTGGTG GAGAAACTGCCTCACTTCCCGATATGGTAAAAGGTGTTGATATAGCTGGAACAGTTCTTGCCATTGCTGAAAAAGGTAAA TTGATATTGGGTAAAGATATTAAAAAGGGAGATGTGATAGTTGGGCTTAGTAGTGCGGGAATACACAGTAATGGATTATC CCTTGCAAGAAAAGTTTTATTCGATATTGCTGGTTTGGGTATAAATGATAAATTGTCATATGGAAAAACTGTTGCCGAGG AGCTCCTAACTCCTACAAGAATATATGTAAAACCAGTAATGGAAATGATTAATTCCGAGGTTTTCGTTAAAGGATTGGCA CATATTACCGGAGGCGGATTTAGAAAAATAATAAGATTAAACAAAAATATAGTTTATTTGATTGATAATTTGCCTGAACC ATTGCCTATATTTAAAGAAATACAAAATATTGGAAATGTGAAAGACGAGGAAATGTTTAAAACATTTAATATGGGAATTG GGTTCTGTGTTGTTGTAGATGAAAAAGATGCCGAAGAAATTATAAAAATATCTGAAAAGTATAATATTTCTGCTTCAATA ATTGGAAAAATAGAGGACGAAGTAGAGGTAAATGGTAAAGTGGTTAAAAATACTGTTGTAGTTGATTATAATGGTAAAAA AATGATAATGGAATAA
Upstream 100 bases:
>100_bases ATAAATTAATAGTAAAATAGAATTATTAAGCAATTATAGTCAATCAACGAACACTTGGCATAATAGAACTATTACTATAA AATACAATTTTGGTGAGAAA
Downstream 100 bases:
>100_bases TAATTATAATATAGTCAATCTTCGGACAATTTCACTAAACCCCCTCTCATATTAAAATGCAAAATAACCATAAAATTAGC AAAAATAAAACAATATTATA
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MITYKDAGVDIYKEDKIIKALVSQIKFKRTDDIKPAEELAGHYAGAIEFGNYYLVLCTDGVGSKMIVAEMADKFDTVPID MIAMNVNDAICIGAEPVALVDYMAVEDITEDMAKQIGKGLNEGLKESNINIIGGETASLPDMVKGVDIAGTVLAIAEKGK LILGKDIKKGDVIVGLSSAGIHSNGLSLARKVLFDIAGLGINDKLSYGKTVAEELLTPTRIYVKPVMEMINSEVFVKGLA HITGGGFRKIIRLNKNIVYLIDNLPEPLPIFKEIQNIGNVKDEEMFKTFNMGIGFCVVVDEKDAEEIIKISEKYNISASI IGKIEDEVEVNGKVVKNTVVVDYNGKKMIME
Sequences:
>Translated_351_residues MITYKDAGVDIYKEDKIIKALVSQIKFKRTDDIKPAEELAGHYAGAIEFGNYYLVLCTDGVGSKMIVAEMADKFDTVPID MIAMNVNDAICIGAEPVALVDYMAVEDITEDMAKQIGKGLNEGLKESNINIIGGETASLPDMVKGVDIAGTVLAIAEKGK LILGKDIKKGDVIVGLSSAGIHSNGLSLARKVLFDIAGLGINDKLSYGKTVAEELLTPTRIYVKPVMEMINSEVFVKGLA HITGGGFRKIIRLNKNIVYLIDNLPEPLPIFKEIQNIGNVKDEEMFKTFNMGIGFCVVVDEKDAEEIIKISEKYNISASI IGKIEDEVEVNGKVVKNTVVVDYNGKKMIME >Mature_351_residues MITYKDAGVDIYKEDKIIKALVSQIKFKRTDDIKPAEELAGHYAGAIEFGNYYLVLCTDGVGSKMIVAEMADKFDTVPID MIAMNVNDAICIGAEPVALVDYMAVEDITEDMAKQIGKGLNEGLKESNINIIGGETASLPDMVKGVDIAGTVLAIAEKGK LILGKDIKKGDVIVGLSSAGIHSNGLSLARKVLFDIAGLGINDKLSYGKTVAEELLTPTRIYVKPVMEMINSEVFVKGLA HITGGGFRKIIRLNKNIVYLIDNLPEPLPIFKEIQNIGNVKDEEMFKTFNMGIGFCVVVDEKDAEEIIKISEKYNISASI IGKIEDEVEVNGKVVKNTVVVDYNGKKMIME
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=384, Percent_Identity=31.25, Blast_Score=174, Evalue=9e-44, Organism=Homo sapiens, GI209869995, Length=384, Percent_Identity=31.25, Blast_Score=174, Evalue=9e-44, Organism=Homo sapiens, GI209869993, Length=384, Percent_Identity=31.25, Blast_Score=174, Evalue=9e-44, Organism=Escherichia coli, GI1788845, Length=333, Percent_Identity=36.036036036036, Blast_Score=191, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17567511, Length=358, Percent_Identity=35.195530726257, Blast_Score=172, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321203, Length=367, Percent_Identity=30.5177111716621, Blast_Score=161, Evalue=1e-40, Organism=Drosophila melanogaster, GI24582400, Length=309, Percent_Identity=36.8932038834951, Blast_Score=184, Evalue=9e-47,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 38229; Mature: 38229
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITYKDAGVDIYKEDKIIKALVSQIKFKRTDDIKPAEELAGHYAGAIEFGNYYLVLCTDG CCEEECCCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCEEEECCEEEEEEECC VGSKMIVAEMADKFDTVPIDMIAMNVNDAICIGAEPVALVDYMAVEDITEDMAKQIGKGL CCCHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH NEGLKESNINIIGGETASLPDMVKGVDIAGTVLAIAEKGKLILGKDIKKGDVIVGLSSAG HHHHHHCCCEEECCCCCCCHHHHCCCCHHHHEEEEECCCCEEEECCCCCCCEEEEEECCC IHSNGLSLARKVLFDIAGLGINDKLSYGKTVAEELLTPTRIYVKPVMEMINSEVFVKGLA CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH HITGGGFRKIIRLNKNIVYLIDNLPEPLPIFKEIQNIGNVKDEEMFKTFNMGIGFCVVVD HHCCCHHHHHHEECCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEC EKDAEEIIKISEKYNISASIIGKIEDEVEVNGKVVKNTVVVDYNGKKMIME CCCHHHHHHHHHCCCCEEEEEECCCCCEECCCEEEEEEEEEEECCCEECCC >Mature Secondary Structure MITYKDAGVDIYKEDKIIKALVSQIKFKRTDDIKPAEELAGHYAGAIEFGNYYLVLCTDG CCEEECCCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCEEEECCEEEEEEECC VGSKMIVAEMADKFDTVPIDMIAMNVNDAICIGAEPVALVDYMAVEDITEDMAKQIGKGL CCCHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH NEGLKESNINIIGGETASLPDMVKGVDIAGTVLAIAEKGKLILGKDIKKGDVIVGLSSAG HHHHHHCCCEEECCCCCCCHHHHCCCCHHHHEEEEECCCCEEEECCCCCCCEEEEEECCC IHSNGLSLARKVLFDIAGLGINDKLSYGKTVAEELLTPTRIYVKPVMEMINSEVFVKGLA CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH HITGGGFRKIIRLNKNIVYLIDNLPEPLPIFKEIQNIGNVKDEEMFKTFNMGIGFCVVVD HHCCCHHHHHHEECCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEC EKDAEEIIKISEKYNISASIIGKIEDEVEVNGKVVKNTVVVDYNGKKMIME CCCHHHHHHHHHCCCCEEEEEECCCCCEECCCEEEEEEEEEEECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA