| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is tuf
Identifier: 150401211
GI number: 150401211
Start: 805098
End: 806384
Strand: Reverse
Name: tuf
Synonym: Maeo_0782
Alternate gene names: 150401211
Gene position: 806384-805098 (Counterclockwise)
Preceding gene: 150401212
Following gene: 150401210
Centisome position: 51.38
GC content: 37.45
Gene sequence:
>1287_bases ATGGCAAAAGAAAAACCCGTACTAAATGTTGCATTTATCGGACACGTAGATGCTGGTAAATCCACAACAGTAGGAAGATT ATTATTGGACAGTGGAACAATTGACCCGCAAATAATAGAAAGATTAAAAAGAGAAGCTTCTGAAAAAGGTAAAGCAGGAT TCGAATTTGCATATGTTATGGATGGATTAAAAGAAGAAAGAGAAAGAGGAGTTACAATCGATATTGCTCACAAGAAATTC GAGAGTAAAAAATACGATGTAACAATTGTGGACTGCCCAGGGCACAGAGACTTCATTAAAAACATGATTACAGGAGCTTC ACAAGCTGATGCAGCTGTATTGGTATGTGATGTAAATGATGCTAAAACAGGTCTTCAACCCCAAACAAGAGAGCACATCT TCTTAATCAGAACATTAGGTGTAAACCAGTTAGCTGTTGCAATTAACAAAATGGATACCGTAGATTACAGTGAAGAAGAA TACAAAGCTATGGTAGATATGCTTTCAAACCAATTATTAAAAATGTTAGGATACAACCCAGCTAACATACACTTTGTTCC AGTAGCATCATTCGTTGGAGACAACAATGTTAAAAAATCTGATAAAATGCCATGGTACAAAGGTCCAACGCTAGTTGAAG TAATCGATACATTCAACCCACCTGAAAAACCAACAAACTTACCATTAAGAATGCCTATTCAAGATGTATATACAATTACA GGAGTAGGAACAGTTCCAGTAGGAAGAGTTGAAACAGGAGTTATGAAACCAGGGGACAAAGTTGTATTTGAACCAGCTGG AGTAAGTGGAGAAATCAAAACAATTGAAGCTCACCACGAACAATTACCAAAAGCAGAACCTGGGGACAATGTTGGATTCA ATGTAAGAGGAGTAGGTAAAAAAGACATTAAAAAAGGAGATGTTTTAGGACACCCAGACAACATCCCAACAGTAGCAGAA GAATTCACAGCTCAAATCGTTGTATTACAGCACCCATCAGTTATGACCGTAGGATACACACCAGTATTCCACGCTCACAC AGCACAGGTAGCATGTACATTCATGGAGCTCCAAAAGAAATTGAACCCAGCTACAGGAGAAGTTAAAGAAGAAAACCCAG ACTTCTTAAAAGCAGGAGATGCAGCAATCGTTAAAATCATGCCAACAAAACCAATGGTTATTGAAAATGTTAAAGAAATT CCACAACTCGGTAGATTCGCTATTAGAGATATGGGAATGACAGTAGCAGCTGGTATGTGTATTGATGTAAAAGCTAAAAA CAAATAA
Upstream 100 bases:
>100_bases TACTCCTTTGGCATAATGGATATTACAATTTATAGTTGTTGATATTATAAAATATTATATATGTTAAAAATATATATTTT AAATAAAACTTGGTGATAAA
Downstream 100 bases:
>100_bases TTTAATAATTGATTCAAATAATTATTAATAATATCTATATTTTTTTAACCTTTTTTAGGGTTTTAATTTTTTAGGGCGTA AATCAGTTTTTTATATTAAA
Product: elongation factor 1-alpha
Products: GDP; phosphate
Alternate protein names: EF-1-alpha; Elongation factor Tu; EF-Tu
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MAKEKPVLNVAFIGHVDAGKSTTVGRLLLDSGTIDPQIIERLKREASEKGKAGFEFAYVMDGLKEERERGVTIDIAHKKF ESKKYDVTIVDCPGHRDFIKNMITGASQADAAVLVCDVNDAKTGLQPQTREHIFLIRTLGVNQLAVAINKMDTVDYSEEE YKAMVDMLSNQLLKMLGYNPANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTIT GVGTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGKKDIKKGDVLGHPDNIPTVAE EFTAQIVVLQHPSVMTVGYTPVFHAHTAQVACTFMELQKKLNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEI PQLGRFAIRDMGMTVAAGMCIDVKAKNK
Sequences:
>Translated_428_residues MAKEKPVLNVAFIGHVDAGKSTTVGRLLLDSGTIDPQIIERLKREASEKGKAGFEFAYVMDGLKEERERGVTIDIAHKKF ESKKYDVTIVDCPGHRDFIKNMITGASQADAAVLVCDVNDAKTGLQPQTREHIFLIRTLGVNQLAVAINKMDTVDYSEEE YKAMVDMLSNQLLKMLGYNPANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTIT GVGTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGKKDIKKGDVLGHPDNIPTVAE EFTAQIVVLQHPSVMTVGYTPVFHAHTAQVACTFMELQKKLNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEI PQLGRFAIRDMGMTVAAGMCIDVKAKNK >Mature_427_residues AKEKPVLNVAFIGHVDAGKSTTVGRLLLDSGTIDPQIIERLKREASEKGKAGFEFAYVMDGLKEERERGVTIDIAHKKFE SKKYDVTIVDCPGHRDFIKNMITGASQADAAVLVCDVNDAKTGLQPQTREHIFLIRTLGVNQLAVAINKMDTVDYSEEEY KAMVDMLSNQLLKMLGYNPANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTITG VGTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGKKDIKKGDVLGHPDNIPTVAEE FTAQIVVLQHPSVMTVGYTPVFHAHTAQVACTFMELQKKLNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEIP QLGRFAIRDMGMTVAAGMCIDVKAKNK
Specific function: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
COG id: COG5256
COG function: function code J; Translation elongation factor EF-1alpha (GTPase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily
Homologues:
Organism=Homo sapiens, GI4503475, Length=446, Percent_Identity=50.2242152466368, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI4503471, Length=446, Percent_Identity=51.1210762331839, Blast_Score=454, Evalue=1e-128, Organism=Homo sapiens, GI223555963, Length=427, Percent_Identity=37.2365339578454, Blast_Score=303, Evalue=3e-82, Organism=Homo sapiens, GI5729864, Length=427, Percent_Identity=37.2365339578454, Blast_Score=302, Evalue=5e-82, Organism=Homo sapiens, GI194018522, Length=424, Percent_Identity=36.3207547169811, Blast_Score=278, Evalue=1e-74, Organism=Homo sapiens, GI194018520, Length=424, Percent_Identity=36.3207547169811, Blast_Score=277, Evalue=1e-74, Organism=Homo sapiens, GI194097354, Length=424, Percent_Identity=36.3207547169811, Blast_Score=277, Evalue=1e-74, Organism=Homo sapiens, GI46094014, Length=424, Percent_Identity=35.6132075471698, Blast_Score=272, Evalue=4e-73, Organism=Homo sapiens, GI34147630, Length=434, Percent_Identity=29.9539170506912, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI54607086, Length=374, Percent_Identity=25.1336898395722, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI45593140, Length=433, Percent_Identity=22.6327944572748, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI82546879, Length=407, Percent_Identity=24.8157248157248, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI157426893, Length=260, Percent_Identity=28.8461538461538, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI4503507, Length=361, Percent_Identity=24.9307479224377, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1789108, Length=430, Percent_Identity=32.3255813953488, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1790412, Length=432, Percent_Identity=32.1759259259259, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI1789737, Length=432, Percent_Identity=32.1759259259259, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI2367247, Length=335, Percent_Identity=25.6716417910448, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI48994988, Length=264, Percent_Identity=29.5454545454545, Blast_Score=79, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17552884, Length=438, Percent_Identity=50.9132420091324, Blast_Score=449, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17569207, Length=438, Percent_Identity=50.9132420091324, Blast_Score=449, Evalue=1e-126, Organism=Caenorhabditis elegans, GI32566303, Length=434, Percent_Identity=48.1566820276498, Blast_Score=414, Evalue=1e-116, Organism=Caenorhabditis elegans, GI115532067, Length=424, Percent_Identity=37.5, Blast_Score=283, Evalue=2e-76, Organism=Caenorhabditis elegans, GI115532065, Length=424, Percent_Identity=37.5, Blast_Score=281, Evalue=4e-76, Organism=Caenorhabditis elegans, GI32566629, Length=426, Percent_Identity=35.6807511737089, Blast_Score=271, Evalue=5e-73, Organism=Caenorhabditis elegans, GI32566301, Length=148, Percent_Identity=58.1081081081081, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17556456, Length=439, Percent_Identity=32.1184510250569, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI25141371, Length=325, Percent_Identity=33.2307692307692, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17565438, Length=380, Percent_Identity=25.5263157894737, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32566299, Length=64, Percent_Identity=51.5625, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17506081, Length=291, Percent_Identity=22.3367697594502, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17557151, Length=255, Percent_Identity=26.2745098039216, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6325337, Length=436, Percent_Identity=51.8348623853211, Blast_Score=454, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6319594, Length=436, Percent_Identity=51.8348623853211, Blast_Score=454, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6320377, Length=426, Percent_Identity=37.5586854460094, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6322937, Length=467, Percent_Identity=29.7644539614561, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6324761, Length=326, Percent_Identity=34.0490797546012, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6323320, Length=314, Percent_Identity=26.7515923566879, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324650, Length=240, Percent_Identity=24.1666666666667, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24652838, Length=446, Percent_Identity=51.1210762331839, Blast_Score=454, Evalue=1e-128, Organism=Drosophila melanogaster, GI17137572, Length=446, Percent_Identity=51.1210762331839, Blast_Score=454, Evalue=1e-128, Organism=Drosophila melanogaster, GI45553807, Length=445, Percent_Identity=50.1123595505618, Blast_Score=445, Evalue=1e-125, Organism=Drosophila melanogaster, GI45553816, Length=445, Percent_Identity=50.1123595505618, Blast_Score=445, Evalue=1e-125, Organism=Drosophila melanogaster, GI24651721, Length=445, Percent_Identity=50.1123595505618, Blast_Score=445, Evalue=1e-125, Organism=Drosophila melanogaster, GI17864154, Length=445, Percent_Identity=50.1123595505618, Blast_Score=445, Evalue=1e-125, Organism=Drosophila melanogaster, GI45550900, Length=430, Percent_Identity=35.1162790697674, Blast_Score=285, Evalue=3e-77, Organism=Drosophila melanogaster, GI17137380, Length=426, Percent_Identity=34.5070422535211, Blast_Score=257, Evalue=9e-69, Organism=Drosophila melanogaster, GI281363316, Length=424, Percent_Identity=32.0754716981132, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI17864358, Length=424, Percent_Identity=32.0754716981132, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI19921738, Length=424, Percent_Identity=28.3018867924528, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI19922690, Length=327, Percent_Identity=25.3822629969419, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24647048, Length=367, Percent_Identity=22.8882833787466, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24647046, Length=367, Percent_Identity=22.8882833787466, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): EF1A_META3 (A6UV43)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324977.1 - ProteinModelPortal: A6UV43 - SMR: A6UV43 - STRING: A6UV43 - GeneID: 5326906 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0782 - eggNOG: arNOG04484 - HOGENOM: HBG307581 - OMA: AFIGHVD - ProtClustDB: PRK12317 - BioCyc: MAEO419665:MAEO_0782-MONOMER - GO: GO:0005737 - HAMAP: MF_00118_A - InterPro: IPR000795 - InterPro: IPR009001 - InterPro: IPR004539 - InterPro: IPR004161 - InterPro: IPR004160 - InterPro: IPR009000 - PRINTS: PR00315 - TIGRFAMs: TIGR00483
Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; PF03143 GTP_EFTU_D3; SSF50465 Elong_init_C; SSF50447 Translat_factor
EC number: 3.6.5.3
Molecular weight: Translated: 46870; Mature: 46739
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKEKPVLNVAFIGHVDAGKSTTVGRLLLDSGTIDPQIIERLKREASEKGKAGFEFAYVM CCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH DGLKEERERGVTIDIAHKKFESKKYDVTIVDCPGHRDFIKNMITGASQADAAVLVCDVND HHHHHHHHCCCEEEEECHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEECCC AKTGLQPQTREHIFLIRTLGVNQLAVAINKMDTVDYSEEEYKAMVDMLSNQLLKMLGYNP CCCCCCCCCCCEEEEEEECCCCEEEHEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC ANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTIT CCEEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEECCHHHEEEEE GVGTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGK CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEECCCH KDIKKGDVLGHPDNIPTVAEEFTAQIVVLQHPSVMTVGYTPVFHAHTAQVACTFMELQKK HHCCCCCCCCCCCCCCHHHHHHCEEEEEEECCCEEEECCCCEEECCHHHHHHHHHHHHHH LNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEIPQLGRFAIRDMGMTVAAGMC CCCCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCEE IDVKAKNK EEEEECCC >Mature Secondary Structure AKEKPVLNVAFIGHVDAGKSTTVGRLLLDSGTIDPQIIERLKREASEKGKAGFEFAYVM CCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH DGLKEERERGVTIDIAHKKFESKKYDVTIVDCPGHRDFIKNMITGASQADAAVLVCDVND HHHHHHHHCCCEEEEECHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEECCC AKTGLQPQTREHIFLIRTLGVNQLAVAINKMDTVDYSEEEYKAMVDMLSNQLLKMLGYNP CCCCCCCCCCCEEEEEEECCCCEEEHEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC ANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTIT CCEEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEECCHHHEEEEE GVGTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGK CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEECCCH KDIKKGDVLGHPDNIPTVAEEFTAQIVVLQHPSVMTVGYTPVFHAHTAQVACTFMELQKK HHCCCCCCCCCCCCCCHHHHHHCEEEEEEECCCEEEECCCCEEECCHHHHHHHHHHHHHH LNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEIPQLGRFAIRDMGMTVAAGMC CCCCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCEE IDVKAKNK EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA