| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401157
Identifier: 150401157
GI number: 150401157
Start: 747235
End: 747627
Strand: Reverse
Name: 150401157
Synonym: Maeo_0728
Alternate gene names: NA
Gene position: 747627-747235 (Counterclockwise)
Preceding gene: 150401160
Following gene: 150401156
Centisome position: 47.63
GC content: 28.75
Gene sequence:
>393_bases ATGGCTAAATTAATGATTAAAACTCCATGTTCAACATTTACTTTGAGTAGTATAATGTGTTGCGTATTTGGTATAAAGAC ATTTGATGTTTCAGTATATTTTACATTATTAAATAATGGAGCTTTGAAGGTAAATGATATATCTGAAAAACTTAATAGAG ATAGAAGCACGGTTCAAAGAGCTGTCCAAAGTCTTGTAAATGCAGGTCTTGCAAAGAGGAAACAAATTAATCTTAAAGAA GGGGGCTATTTTTATGTATATATGGCAATTCCTTTTGAAGAGATAAAAAATGCTATTAAAAATGCTATGGAAACTTGGTG CAATGATGTTAAAAACTGGGTAAATTCCATAGATGATAATGATTTAAAAAATATGGCCGATGAAAAAATATAA
Upstream 100 bases:
>100_bases TTTCGAACACACTATAAATATACTGGTGGTGTATATTATAATGATAAATATATATATAATTTATCACTACATAACTTAAT AAATTAGAATCGGTGGTATT
Downstream 100 bases:
>100_bases AATAAATTTAATCATTTTTTAGGGGTATTCAGGAGCTCCATTATAGTAAATCGACGAACGATTTTCCTAATATTTATGTA CTAATAGACTCTATTCTATT
Product: transcriptional regulator, TrmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MAKLMIKTPCSTFTLSSIMCCVFGIKTFDVSVYFTLLNNGALKVNDISEKLNRDRSTVQRAVQSLVNAGLAKRKQINLKE GGYFYVYMAIPFEEIKNAIKNAMETWCNDVKNWVNSIDDNDLKNMADEKI
Sequences:
>Translated_130_residues MAKLMIKTPCSTFTLSSIMCCVFGIKTFDVSVYFTLLNNGALKVNDISEKLNRDRSTVQRAVQSLVNAGLAKRKQINLKE GGYFYVYMAIPFEEIKNAIKNAMETWCNDVKNWVNSIDDNDLKNMADEKI >Mature_129_residues AKLMIKTPCSTFTLSSIMCCVFGIKTFDVSVYFTLLNNGALKVNDISEKLNRDRSTVQRAVQSLVNAGLAKRKQINLKEG GYFYVYMAIPFEEIKNAIKNAMETWCNDVKNWVNSIDDNDLKNMADEKI
Specific function: Unknown
COG id: COG3355
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002831 - InterPro: IPR011991 [H]
Pfam domain/function: PF01978 TrmB [H]
EC number: NA
Molecular weight: Translated: 14758; Mature: 14627
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLMIKTPCSTFTLSSIMCCVFGIKTFDVSVYFTLLNNGALKVNDISEKLNRDRSTVQR CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEHHHHHHHCCCHHHHHH AVQSLVNAGLAKRKQINLKEGGYFYVYMAIPFEEIKNAIKNAMETWCNDVKNWVNSIDDN HHHHHHHCCHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DLKNMADEKI HHHHHHCCCC >Mature Secondary Structure AKLMIKTPCSTFTLSSIMCCVFGIKTFDVSVYFTLLNNGALKVNDISEKLNRDRSTVQR CCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEHHHHHHHCCCHHHHHH AVQSLVNAGLAKRKQINLKEGGYFYVYMAIPFEEIKNAIKNAMETWCNDVKNWVNSIDDN HHHHHHHCCHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DLKNMADEKI HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]