Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401157

Identifier: 150401157

GI number: 150401157

Start: 747235

End: 747627

Strand: Reverse

Name: 150401157

Synonym: Maeo_0728

Alternate gene names: NA

Gene position: 747627-747235 (Counterclockwise)

Preceding gene: 150401160

Following gene: 150401156

Centisome position: 47.63

GC content: 28.75

Gene sequence:

>393_bases
ATGGCTAAATTAATGATTAAAACTCCATGTTCAACATTTACTTTGAGTAGTATAATGTGTTGCGTATTTGGTATAAAGAC
ATTTGATGTTTCAGTATATTTTACATTATTAAATAATGGAGCTTTGAAGGTAAATGATATATCTGAAAAACTTAATAGAG
ATAGAAGCACGGTTCAAAGAGCTGTCCAAAGTCTTGTAAATGCAGGTCTTGCAAAGAGGAAACAAATTAATCTTAAAGAA
GGGGGCTATTTTTATGTATATATGGCAATTCCTTTTGAAGAGATAAAAAATGCTATTAAAAATGCTATGGAAACTTGGTG
CAATGATGTTAAAAACTGGGTAAATTCCATAGATGATAATGATTTAAAAAATATGGCCGATGAAAAAATATAA

Upstream 100 bases:

>100_bases
TTTCGAACACACTATAAATATACTGGTGGTGTATATTATAATGATAAATATATATATAATTTATCACTACATAACTTAAT
AAATTAGAATCGGTGGTATT

Downstream 100 bases:

>100_bases
AATAAATTTAATCATTTTTTAGGGGTATTCAGGAGCTCCATTATAGTAAATCGACGAACGATTTTCCTAATATTTATGTA
CTAATAGACTCTATTCTATT

Product: transcriptional regulator, TrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MAKLMIKTPCSTFTLSSIMCCVFGIKTFDVSVYFTLLNNGALKVNDISEKLNRDRSTVQRAVQSLVNAGLAKRKQINLKE
GGYFYVYMAIPFEEIKNAIKNAMETWCNDVKNWVNSIDDNDLKNMADEKI

Sequences:

>Translated_130_residues
MAKLMIKTPCSTFTLSSIMCCVFGIKTFDVSVYFTLLNNGALKVNDISEKLNRDRSTVQRAVQSLVNAGLAKRKQINLKE
GGYFYVYMAIPFEEIKNAIKNAMETWCNDVKNWVNSIDDNDLKNMADEKI
>Mature_129_residues
AKLMIKTPCSTFTLSSIMCCVFGIKTFDVSVYFTLLNNGALKVNDISEKLNRDRSTVQRAVQSLVNAGLAKRKQINLKEG
GYFYVYMAIPFEEIKNAIKNAMETWCNDVKNWVNSIDDNDLKNMADEKI

Specific function: Unknown

COG id: COG3355

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 14758; Mature: 14627

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLMIKTPCSTFTLSSIMCCVFGIKTFDVSVYFTLLNNGALKVNDISEKLNRDRSTVQR
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEHHHHHHHCCCHHHHHH
AVQSLVNAGLAKRKQINLKEGGYFYVYMAIPFEEIKNAIKNAMETWCNDVKNWVNSIDDN
HHHHHHHCCHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DLKNMADEKI
HHHHHHCCCC
>Mature Secondary Structure 
AKLMIKTPCSTFTLSSIMCCVFGIKTFDVSVYFTLLNNGALKVNDISEKLNRDRSTVQR
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEHHHHHHHCCCHHHHHH
AVQSLVNAGLAKRKQINLKEGGYFYVYMAIPFEEIKNAIKNAMETWCNDVKNWVNSIDDN
HHHHHHHCCHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DLKNMADEKI
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]