| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is frvX [C]
Identifier: 150401138
GI number: 150401138
Start: 726186
End: 727241
Strand: Reverse
Name: frvX [C]
Synonym: Maeo_0709
Alternate gene names: 150401138
Gene position: 727241-726186 (Counterclockwise)
Preceding gene: 150401139
Following gene: 150401137
Centisome position: 46.34
GC content: 33.43
Gene sequence:
>1056_bases ATGACTGTGGTTAATTATTTAAAAGAATTATCGACGATGGAAGGAATATCCGGAAGAGAAGATAGAATAAGAGATTATAT GGAAGAAGAACTTAAAAAATATTGCGATGAAGTATTCGTTGATAAATTTGGAAATCTCATAGCCAAAAAAGGAAATACTG GAAAAAAAATAATGATTGCAGCACATATGGACGAGATTGGTTTAATGGTTAAATATATTGATGATAAAGGATTTTTAAAA TTCGTAAAAATTGGGGGAATTAATGACCAGATGCTTTTAAATCAAAAAGTAGTTGTTCATACGGATAAGGGAGATATAAT TGGTGTTTTAGGTTCAAAACCGCCCCACAAAATGAAAGAGGAAGAAAGAAATAAATTAATGAAATCAGAATTTATGTTTA TAGACATTGGGGCAAAAAATAAAGAAGATGCCATAAATATGGGGGTTGAAATAGGCTCATGGATATCATTTAAAACTGAA TTTGATGTTCTTGGGAACAATAGAATTACAGGAAAAGCCTTTGACGATAGGGCAGGATGTGCTGTTTTGTTGGATGTGGC AAAAAAATTAAAAGATATGGAATTAAATTGTCAATTATATTTGGTTGGAACAGTTCAGGAGGAAGTTGGGTTAAAAGGTG CTAAAACTTCGGCATTTGGTATAAGCCCAGATGTTGCATTTGCACTTGATGTAACAATATGTGGGGACCACCCAGGTATA ACAATGGAGGATGCTGCTGTTGAAATGGGAAAAGGTCCAGTATTTGGAATAGTTGATGCTGCTGGAAGAGGTTTAATAGC TCACCCAAAAGTTATAACGATGGTAAAAGAAGTAAGTAAAAAATACGACATTCCTGTTCAATATGAAGTTGGAGACGGTG GAACTACCGATGCCACTTCAATACAATTAACTCAGGATGGAGTGCCTACTGGAGTTATTTCTGTTCCTTCTAGATATATT CATACCCCCGTTGAGATGATTGATATTGAGGATTTGGAAAAAACTTCAGATTTAATGTTAAAATGTGTAGTTGATTTAAA TAATTATTTTGAATAA
Upstream 100 bases:
>100_bases ATAATAAATAAAATTATATAATATAATTTGATAATGGTATATAATAAGTTAATTTAATTAATTTTAATTTTTATAATCAA AAATAAAATATGGTGAAAAT
Downstream 100 bases:
>100_bases TAAAATAAATATAATAAACATATTTAATCTTCGGACAATTTCACCGTAGTTAATCTTCGGACTATCTAGGACAAACAATG GACAGTTATTGAAGATTAAC
Product: cellulase
Products: D-glucose; GDP
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTVVNYLKELSTMEGISGREDRIRDYMEEELKKYCDEVFVDKFGNLIAKKGNTGKKIMIAAHMDEIGLMVKYIDDKGFLK FVKIGGINDQMLLNQKVVVHTDKGDIIGVLGSKPPHKMKEEERNKLMKSEFMFIDIGAKNKEDAINMGVEIGSWISFKTE FDVLGNNRITGKAFDDRAGCAVLLDVAKKLKDMELNCQLYLVGTVQEEVGLKGAKTSAFGISPDVAFALDVTICGDHPGI TMEDAAVEMGKGPVFGIVDAAGRGLIAHPKVITMVKEVSKKYDIPVQYEVGDGGTTDATSIQLTQDGVPTGVISVPSRYI HTPVEMIDIEDLEKTSDLMLKCVVDLNNYFE
Sequences:
>Translated_351_residues MTVVNYLKELSTMEGISGREDRIRDYMEEELKKYCDEVFVDKFGNLIAKKGNTGKKIMIAAHMDEIGLMVKYIDDKGFLK FVKIGGINDQMLLNQKVVVHTDKGDIIGVLGSKPPHKMKEEERNKLMKSEFMFIDIGAKNKEDAINMGVEIGSWISFKTE FDVLGNNRITGKAFDDRAGCAVLLDVAKKLKDMELNCQLYLVGTVQEEVGLKGAKTSAFGISPDVAFALDVTICGDHPGI TMEDAAVEMGKGPVFGIVDAAGRGLIAHPKVITMVKEVSKKYDIPVQYEVGDGGTTDATSIQLTQDGVPTGVISVPSRYI HTPVEMIDIEDLEKTSDLMLKCVVDLNNYFE >Mature_350_residues TVVNYLKELSTMEGISGREDRIRDYMEEELKKYCDEVFVDKFGNLIAKKGNTGKKIMIAAHMDEIGLMVKYIDDKGFLKF VKIGGINDQMLLNQKVVVHTDKGDIIGVLGSKPPHKMKEEERNKLMKSEFMFIDIGAKNKEDAINMGVEIGSWISFKTEF DVLGNNRITGKAFDDRAGCAVLLDVAKKLKDMELNCQLYLVGTVQEEVGLKGAKTSAFGISPDVAFALDVTICGDHPGIT MEDAAVEMGKGPVFGIVDAAGRGLIAHPKVITMVKEVSKKYDIPVQYEVGDGGTTDATSIQLTQDGVPTGVISVPSRYIH TPVEMIDIEDLEKTSDLMLKCVVDLNNYFE
Specific function: Unknown
COG id: COG1363
COG function: function code G; Cellulase M and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M42 family [H]
Homologues:
Organism=Escherichia coli, GI1790332, Length=337, Percent_Identity=36.4985163204748, Blast_Score=240, Evalue=1e-64, Organism=Escherichia coli, GI87082417, Length=346, Percent_Identity=35.5491329479769, Blast_Score=231, Evalue=5e-62, Organism=Escherichia coli, GI1788727, Length=338, Percent_Identity=32.8402366863905, Blast_Score=180, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008007 [H]
Pfam domain/function: PF05343 Peptidase_M42 [H]
EC number: 3.2.1.4
Molecular weight: Translated: 38676; Mature: 38545
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVNYLKELSTMEGISGREDRIRDYMEEELKKYCDEVFVDKFGNLIAKKGNTGKKIMIA CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEE AHMDEIGLMVKYIDDKGFLKFVKIGGINDQMLLNQKVVVHTDKGDIIGVLGSKPPHKMKE EECCCCCEEEEEECCCCCEEEEEECCCCCCEEECCEEEEECCCCCEEEECCCCCCHHHHH EERNKLMKSEFMFIDIGAKNKEDAINMGVEIGSWISFKTEFDVLGNNRITGKAFDDRAGC HHHHHHHHHCEEEEEECCCCCCCHHHCCEEECCEEEEEEEEEEECCCEEECCCCCCCCCH AVLLDVAKKLKDMELNCQLYLVGTVQEEVGLKGAKTSAFGISPDVAFALDVTICGDHPGI HHHHHHHHHHHCCCCCEEEEEEEEEHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC TMEDAAVEMGKGPVFGIVDAAGRGLIAHPKVITMVKEVSKKYDIPVQYEVGDGGTTDATS EECHHHHHCCCCCEEEEEECCCCCEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEE IQLTQDGVPTGVISVPSRYIHTPVEMIDIEDLEKTSDLMLKCVVDLNNYFE EEEECCCCCCCEEECCHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVVNYLKELSTMEGISGREDRIRDYMEEELKKYCDEVFVDKFGNLIAKKGNTGKKIMIA CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEE AHMDEIGLMVKYIDDKGFLKFVKIGGINDQMLLNQKVVVHTDKGDIIGVLGSKPPHKMKE EECCCCCEEEEEECCCCCEEEEEECCCCCCEEECCEEEEECCCCCEEEECCCCCCHHHHH EERNKLMKSEFMFIDIGAKNKEDAINMGVEIGSWISFKTEFDVLGNNRITGKAFDDRAGC HHHHHHHHHCEEEEEECCCCCCCHHHCCEEECCEEEEEEEEEEECCCEEECCCCCCCCCH AVLLDVAKKLKDMELNCQLYLVGTVQEEVGLKGAKTSAFGISPDVAFALDVTICGDHPGI HHHHHHHHHHHCCCCCEEEEEEEEEHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC TMEDAAVEMGKGPVFGIVDAAGRGLIAHPKVITMVKEVSKKYDIPVQYEVGDGGTTDATS EECHHHHHCCCCCEEEEEECCCCCEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEE IQLTQDGVPTGVISVPSRYIHTPVEMIDIEDLEKTSDLMLKCVVDLNNYFE EEEECCCCCCCEEECCHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GDPglucose; H2O
Specific reaction: GDP-glucose + H2O = D-glucose + GDP
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]