| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is rpl44e [H]
Identifier: 150401130
GI number: 150401130
Start: 719828
End: 720112
Strand: Direct
Name: rpl44e [H]
Synonym: Maeo_0701
Alternate gene names: 150401130
Gene position: 719828-720112 (Clockwise)
Preceding gene: 150401129
Following gene: 150401131
Centisome position: 45.86
GC content: 35.44
Gene sequence:
>285_bases ATGGCTAAAATGAAAAAGAAAATAAAAAGATATTGCCCATACTGTAAAGTTCATACATTACATACAGTAGAGAGAGCAAA AAAGAGAAAAGCAAGTGAATTAACTTGGGGACAGAGACAATTCAGAAGAGTTACAGCAGGATACGGGGGATACCCAAGGC CTTTACCAAGTGGAGCAAAACCGATTAAAAAATTAGATTTAAGGTATAAATGCTCAGCATGTGGAAAAATGCATGTAAGA AGTAACGGCGGATATAGGGCAAGAATGTTTGAATTAGTAGATTAA
Upstream 100 bases:
>100_bases TATAACTTAAACAAAAACGATGTAATTACACTGGATAAAAAAATTTCGAGTATTTTGGAAAAACACGATATCGTTAAAAA AATAAGCAGTGGTGAATAAT
Downstream 100 bases:
>100_bases ATATAATATAAGGAAATAATATAATATAAATATATAAAAATTAAAATAAATAACAGTTAAAAGGTGAAATATTGGCATTA ATTCCAAAACCAAGAAGTAG
Product: 50S ribosomal protein L44e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MAKMKKKIKRYCPYCKVHTLHTVERAKKRKASELTWGQRQFRRVTAGYGGYPRPLPSGAKPIKKLDLRYKCSACGKMHVR SNGGYRARMFELVD
Sequences:
>Translated_94_residues MAKMKKKIKRYCPYCKVHTLHTVERAKKRKASELTWGQRQFRRVTAGYGGYPRPLPSGAKPIKKLDLRYKCSACGKMHVR SNGGYRARMFELVD >Mature_93_residues AKMKKKIKRYCPYCKVHTLHTVERAKKRKASELTWGQRQFRRVTAGYGGYPRPLPSGAKPIKKLDLRYKCSACGKMHVRS NGGYRARMFELVD
Specific function: Unknown
COG id: COG1631
COG function: function code J; Ribosomal protein L44E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L44e family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000552 - InterPro: IPR011332 - ProDom: PD002841 [H]
Pfam domain/function: PF00935 Ribosomal_L44 [H]
EC number: NA
Molecular weight: Translated: 10920; Mature: 10789
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKMKKKIKRYCPYCKVHTLHTVERAKKRKASELTWGQRQFRRVTAGYGGYPRPLPSGAK CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC PIKKLDLRYKCSACGKMHVRSNGGYRARMFELVD CHHHHCCCCCCCCCCEEEEECCCCCEEHEEEECC >Mature Secondary Structure AKMKKKIKRYCPYCKVHTLHTVERAKKRKASELTWGQRQFRRVTAGYGGYPRPLPSGAK CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC PIKKLDLRYKCSACGKMHVRSNGGYRARMFELVD CHHHHCCCCCCCCCCEEEEECCCCCEEHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]