| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is aroC
Identifier: 150401119
GI number: 150401119
Start: 707642
End: 708763
Strand: Direct
Name: aroC
Synonym: Maeo_0689
Alternate gene names: 150401119
Gene position: 707642-708763 (Clockwise)
Preceding gene: 150401118
Following gene: 150401120
Centisome position: 45.09
GC content: 34.58
Gene sequence:
>1122_bases ATTAACACAATAGGCAAATCTTTTAGAATTACGGCATGGGGGGAAAGTCATGGAAAGGCATTAGGTGCTGTCGTAGACGG ATGTCCTTCAAATTTACCACTAACAGGGGAGGACATTCAAAAGGAGTTAAACAGAAGAAGGCCAGGATATAGCTTATTTT CCACACCAAGAAAGGAGGGGGACAAGGTAGAAATATTGTCTGGAATTTTTGAGGGAAAAACTACTGGAACTCCCATATCT GCAATAGTATATAATACAAATCAAAAATCAAAAGATTACAGTCATTTGAAAAATACACCAAGACCGGGACATGCTGATTT ATCGTATAAATTAAAATATGGAAATTATGATTATAGGGGAGGGGGTAGAAGTAGTGGAAGAACAACAATAGGGCACACAA TAGGGGGAGCAATAGCAAAAAAACTATTGGATTATACTCACAATATAAAAATAATAGGATATACCACAAAAATAGGGAAT ATCGAAGGAGATTTTAATTATTATAATAGTATTGAAAATAATGAAAAAATGATAAATGAGGAATTAATAAATAAAATAGA AAATAATCCATTAAGATGCCCTTCCTCAAATGCCGATGAAATGAAAGATTTTGTATTAAATGCAATGGAAAATAAAAACA GTGTCGGAGGAGTAATTGAATTAATTGCCCTAAATGTTCCAGTTGGAGTTGGAAACCCAATATTTGGTAAATTAAATGGG GAGCTCTCAAATGCAATAATGAATATTAATGCCGTTAAAGGTGTGGAGATAGGTAGGGGATTTGAAAGTGCGGAGCTCCT TGGAAGTGAAATGAATGATGAATATTATTATGATGAAAACAATAATATAAAATTAAAAACAAATAATTGTGGTGGTGTGT TGGGCGGCATAAGTTGCGGAGCTCCCTTAGTAATCAGGGTGGCAGTTAAACCAACGCCATCAATATCCGCAGTCCAAAGC ACCATAAATATAGAAAATAAAACAACAGAAAATCTTGAAATAGGGGGACGACATGACCCAATAATTGTTCCCAGAGTAAT ACCTGTTTTGGAATCAATGGTGGCAATTGCGTTAAGTGATTTAATGATTAGAGGTGGATTTATTCACCCCTGTAAATTAT AA
Upstream 100 bases:
>100_bases AGCATTACAGCAAATACAGCAAGATACGATAGGACACATAGAGAACATACACTTTTCAAACACACCATAATAAAAAGAAA AAAGAAAAAAAGGTGAAATT
Downstream 100 bases:
>100_bases ATATTAGAAACGGGATATAATATTAATAATTAATTATTTATATTTTTATATTTTATTCTGATAATTTTAATTTTATATAT TTATTTTTTACAACCATATA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MNTIGKSFRITAWGESHGKALGAVVDGCPSNLPLTGEDIQKELNRRRPGYSLFSTPRKEGDKVEILSGIFEGKTTGTPIS AIVYNTNQKSKDYSHLKNTPRPGHADLSYKLKYGNYDYRGGGRSSGRTTIGHTIGGAIAKKLLDYTHNIKIIGYTTKIGN IEGDFNYYNSIENNEKMINEELINKIENNPLRCPSSNADEMKDFVLNAMENKNSVGGVIELIALNVPVGVGNPIFGKLNG ELSNAIMNINAVKGVEIGRGFESAELLGSEMNDEYYYDENNNIKLKTNNCGGVLGGISCGAPLVIRVAVKPTPSISAVQS TINIENKTTENLEIGGRHDPIIVPRVIPVLESMVAIALSDLMIRGGFIHPCKL
Sequences:
>Translated_373_residues MNTIGKSFRITAWGESHGKALGAVVDGCPSNLPLTGEDIQKELNRRRPGYSLFSTPRKEGDKVEILSGIFEGKTTGTPIS AIVYNTNQKSKDYSHLKNTPRPGHADLSYKLKYGNYDYRGGGRSSGRTTIGHTIGGAIAKKLLDYTHNIKIIGYTTKIGN IEGDFNYYNSIENNEKMINEELINKIENNPLRCPSSNADEMKDFVLNAMENKNSVGGVIELIALNVPVGVGNPIFGKLNG ELSNAIMNINAVKGVEIGRGFESAELLGSEMNDEYYYDENNNIKLKTNNCGGVLGGISCGAPLVIRVAVKPTPSISAVQS TINIENKTTENLEIGGRHDPIIVPRVIPVLESMVAIALSDLMIRGGFIHPCKL >Mature_373_residues MNTIGKSFRITAWGESHGKALGAVVDGCPSNLPLTGEDIQKELNRRRPGYSLFSTPRKEGDKVEILSGIFEGKTTGTPIS AIVYNTNQKSKDYSHLKNTPRPGHADLSYKLKYGNYDYRGGGRSSGRTTIGHTIGGAIAKKLLDYTHNIKIIGYTTKIGN IEGDFNYYNSIENNEKMINEELINKIENNPLRCPSSNADEMKDFVLNAMENKNSVGGVIELIALNVPVGVGNPIFGKLNG ELSNAIMNINAVKGVEIGRGFESAELLGSEMNDEYYYDENNNIKLKTNNCGGVLGGISCGAPLVIRVAVKPTPSISAVQS TINIENKTTENLEIGGRHDPIIVPRVIPVLESMVAIALSDLMIRGGFIHPCKL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=364, Percent_Identity=44.2307692307692, Blast_Score=291, Evalue=5e-80, Organism=Saccharomyces cerevisiae, GI6321290, Length=366, Percent_Identity=42.896174863388, Blast_Score=299, Evalue=4e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_META3 (A6UUV1)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324885.1 - ProteinModelPortal: A6UUV1 - SMR: A6UUV1 - STRING: A6UUV1 - GeneID: 5326689 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0689 - eggNOG: arNOG04618 - HOGENOM: HBG292336 - OMA: SRFTTQR - ProtClustDB: PRK05382 - BioCyc: MAEO419665:MAEO_0689-MONOMER - HAMAP: MF_00300_A - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 40501; Mature: 40501
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIGKSFRITAWGESHGKALGAVVDGCPSNLPLTGEDIQKELNRRRPGYSLFSTPRKEG CCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCC DKVEILSGIFEGKTTGTPISAIVYNTNQKSKDYSHLKNTPRPGHADLSYKLKYGNYDYRG CEEHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCEEEEEEECCEEECC GGRSSGRTTIGHTIGGAIAKKLLDYTHNIKIIGYTTKIGNIEGDFNYYNSIENNEKMINE CCCCCCCEEHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHCCCCCHHHHHHH ELINKIENNPLRCPSSNADEMKDFVLNAMENKNSVGGVIELIALNVPVGVGNPIFGKLNG HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEECCC ELSNAIMNINAVKGVEIGRGFESAELLGSEMNDEYYYDENNNIKLKTNNCGGVLGGISCG HHHHHEEEEECCCCEECCCCCCHHHHHCCCCCCCEEEECCCEEEEEECCCCCEECCCCCC APLVIRVAVKPTPSISAVQSTINIENKTTENLEIGGRHDPIIVPRVIPVLESMVAIALSD CCEEEEEEECCCCCHHHHHHHEECCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHH LMIRGGFIHPCKL HHHCCCCCCCCCC >Mature Secondary Structure MNTIGKSFRITAWGESHGKALGAVVDGCPSNLPLTGEDIQKELNRRRPGYSLFSTPRKEG CCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCC DKVEILSGIFEGKTTGTPISAIVYNTNQKSKDYSHLKNTPRPGHADLSYKLKYGNYDYRG CEEHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCEEEEEEECCEEECC GGRSSGRTTIGHTIGGAIAKKLLDYTHNIKIIGYTTKIGNIEGDFNYYNSIENNEKMINE CCCCCCCEEHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHCCCCCHHHHHHH ELINKIENNPLRCPSSNADEMKDFVLNAMENKNSVGGVIELIALNVPVGVGNPIFGKLNG HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEECCC ELSNAIMNINAVKGVEIGRGFESAELLGSEMNDEYYYDENNNIKLKTNNCGGVLGGISCG HHHHHEEEEECCCCEECCCCCCHHHHHCCCCCCCEEEECCCEEEEEECCCCCEECCCCCC APLVIRVAVKPTPSISAVQSTINIENKTTENLEIGGRHDPIIVPRVIPVLESMVAIALSD CCEEEEEEECCCCCHHHHHHHEECCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHH LMIRGGFIHPCKL HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA