Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is yleA [C]

Identifier: 150401116

GI number: 150401116

Start: 704827

End: 705963

Strand: Direct

Name: yleA [C]

Synonym: Maeo_0686

Alternate gene names: 150401116

Gene position: 704827-705963 (Clockwise)

Preceding gene: 150401115

Following gene: 150401118

Centisome position: 44.91

GC content: 30.17

Gene sequence:

>1137_bases
ATGATTGGATTTAAATTAACTCCAAAAAATAGGTATAGTGTATCAAAATTATATCCCATAATTGGCGGAAAATTATTTAA
AAATTTCAATGAAATAATGGAGCATATAAAAAATGGTAAATTAAATATTTTAATTTATTCATTTACTTCATTACAAAGAG
ATAAAATAGCAAAAGAAATTGAAATTATTAATAAAATTAAAAAAGAAAAAAAATCAACGCATCCAATTTTAATTGCAGGT
GGTCCGCATCCTTCGGGAGCTCCCAACGACACATTAAAAATAGGATTTGATTATGTAATTGTTGGAGAGGGGGAAATAAC
ACTACCAAAGATAATAAGCAAATTAAACCAAAATAAAGAGCTAAACAATAAAATAATCATGGGAGAGCCAATTAATGATT
TAGACGAATTTGATAAAATAAATCCAATGACACCAGTAGAAATAACAAGAGGTTGCCCCCATAAATGCGGTTTCTGTCAA
ACTCCTCAAATATTCGGCAATAAAGTAAGGCATAGAAGTATTGATAATATTTTAAAATCAATTAATCCAAATAGTGATGT
TAGACTAATCACCCCCAATGCCTTTTGCTATGGCTCAGAAACTGGAACAAAACCAAATATTGAAAAATTAGAATTGTTAT
TAAAAAAATTAAGGGAAGGAAAAGGAAAACTATTTTTTGGAACATTTCCATCAGAAGTTAGGCCCGAATTTATTCAAAAA
GATACCATTGAGTTAGTTGCCAAATATTGCCATAACAAATATTTACATTTTGGAGCTCAAAGCGGTAGCGATGAAATGTT
AAAATTAATAAGGAGGGGGCATACTGTAAATGATGTTTTAAATGGGGTTGATTTATGCAAGGATTATAATTTAATTCCAA
AGGTGGATTTTATATTTGGATTTCCCAATGAAAATGAATTTCATAGAAAGGAAAGCATGGAGCTCCTAAATTATATAATA
AAAAAAGGCGGAAAAGTTCATGCACATTATTTTATGCCTTTGGTCGGAACGAATTTTGAGGGGAGCTCCCCGACACCACT
TGATAAAAAAACATTAAAAACATTAGGGCAATTATCACAAAAAGGGCTTGTTAGTGGTTCGTGGAGTTATCAAAGAGATG
TGCAAAATATACAATAA

Upstream 100 bases:

>100_bases
TATCAATATTTGCTTTGAGAAACGAAAAATAAACTGTTTTTGGCTATTCTATAATATGCATATTTTTAATATTAATATAT
AAAAATAATTTGGTGTTTTT

Downstream 100 bases:

>100_bases
TATGACATAGGCATGTGTGTTTTGGGAGCTCCTATCACTATAATATATAGTTATATATTTATTTCTTTTTTATTTATCGT
GTTATATGTATTTCTAAATC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MIGFKLTPKNRYSVSKLYPIIGGKLFKNFNEIMEHIKNGKLNILIYSFTSLQRDKIAKEIEIINKIKKEKKSTHPILIAG
GPHPSGAPNDTLKIGFDYVIVGEGEITLPKIISKLNQNKELNNKIIMGEPINDLDEFDKINPMTPVEITRGCPHKCGFCQ
TPQIFGNKVRHRSIDNILKSINPNSDVRLITPNAFCYGSETGTKPNIEKLELLLKKLREGKGKLFFGTFPSEVRPEFIQK
DTIELVAKYCHNKYLHFGAQSGSDEMLKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFGFPNENEFHRKESMELLNYII
KKGGKVHAHYFMPLVGTNFEGSSPTPLDKKTLKTLGQLSQKGLVSGSWSYQRDVQNIQ

Sequences:

>Translated_378_residues
MIGFKLTPKNRYSVSKLYPIIGGKLFKNFNEIMEHIKNGKLNILIYSFTSLQRDKIAKEIEIINKIKKEKKSTHPILIAG
GPHPSGAPNDTLKIGFDYVIVGEGEITLPKIISKLNQNKELNNKIIMGEPINDLDEFDKINPMTPVEITRGCPHKCGFCQ
TPQIFGNKVRHRSIDNILKSINPNSDVRLITPNAFCYGSETGTKPNIEKLELLLKKLREGKGKLFFGTFPSEVRPEFIQK
DTIELVAKYCHNKYLHFGAQSGSDEMLKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFGFPNENEFHRKESMELLNYII
KKGGKVHAHYFMPLVGTNFEGSSPTPLDKKTLKTLGQLSQKGLVSGSWSYQRDVQNIQ
>Mature_378_residues
MIGFKLTPKNRYSVSKLYPIIGGKLFKNFNEIMEHIKNGKLNILIYSFTSLQRDKIAKEIEIINKIKKEKKSTHPILIAG
GPHPSGAPNDTLKIGFDYVIVGEGEITLPKIISKLNQNKELNNKIIMGEPINDLDEFDKINPMTPVEITRGCPHKCGFCQ
TPQIFGNKVRHRSIDNILKSINPNSDVRLITPNAFCYGSETGTKPNIEKLELLLKKLREGKGKLFFGTFPSEVRPEFIQK
DTIELVAKYCHNKYLHFGAQSGSDEMLKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFGFPNENEFHRKESMELLNYII
KKGGKVHAHYFMPLVGTNFEGSSPTPLDKKTLKTLGQLSQKGLVSGSWSYQRDVQNIQ

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42817; Mature: 42817

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFKLTPKNRYSVSKLYPIIGGKLFKNFNEIMEHIKNGKLNILIYSFTSLQRDKIAKEI
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
EIINKIKKEKKSTHPILIAGGPHPSGAPNDTLKIGFDYVIVGEGEITLPKIISKLNQNKE
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCCC
LNNKIIMGEPINDLDEFDKINPMTPVEITRGCPHKCGFCQTPQIFGNKVRHRSIDNILKS
CCCEEEECCCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
INPNSDVRLITPNAFCYGSETGTKPNIEKLELLLKKLREGKGKLFFGTFPSEVRPEFIQK
CCCCCCEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHCHHHHHH
DTIELVAKYCHNKYLHFGAQSGSDEMLKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFG
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEE
FPNENEFHRKESMELLNYIIKKGGKVHAHYFMPLVGTNFEGSSPTPLDKKTLKTLGQLSQ
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
KGLVSGSWSYQRDVQNIQ
CCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MIGFKLTPKNRYSVSKLYPIIGGKLFKNFNEIMEHIKNGKLNILIYSFTSLQRDKIAKEI
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
EIINKIKKEKKSTHPILIAGGPHPSGAPNDTLKIGFDYVIVGEGEITLPKIISKLNQNKE
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCCC
LNNKIIMGEPINDLDEFDKINPMTPVEITRGCPHKCGFCQTPQIFGNKVRHRSIDNILKS
CCCEEEECCCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
INPNSDVRLITPNAFCYGSETGTKPNIEKLELLLKKLREGKGKLFFGTFPSEVRPEFIQK
CCCCCCEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHCHHHHHH
DTIELVAKYCHNKYLHFGAQSGSDEMLKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFG
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEE
FPNENEFHRKESMELLNYIIKKGGKVHAHYFMPLVGTNFEGSSPTPLDKKTLKTLGQLSQ
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
KGLVSGSWSYQRDVQNIQ
CCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]