| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is yleA [C]
Identifier: 150401116
GI number: 150401116
Start: 704827
End: 705963
Strand: Direct
Name: yleA [C]
Synonym: Maeo_0686
Alternate gene names: 150401116
Gene position: 704827-705963 (Clockwise)
Preceding gene: 150401115
Following gene: 150401118
Centisome position: 44.91
GC content: 30.17
Gene sequence:
>1137_bases ATGATTGGATTTAAATTAACTCCAAAAAATAGGTATAGTGTATCAAAATTATATCCCATAATTGGCGGAAAATTATTTAA AAATTTCAATGAAATAATGGAGCATATAAAAAATGGTAAATTAAATATTTTAATTTATTCATTTACTTCATTACAAAGAG ATAAAATAGCAAAAGAAATTGAAATTATTAATAAAATTAAAAAAGAAAAAAAATCAACGCATCCAATTTTAATTGCAGGT GGTCCGCATCCTTCGGGAGCTCCCAACGACACATTAAAAATAGGATTTGATTATGTAATTGTTGGAGAGGGGGAAATAAC ACTACCAAAGATAATAAGCAAATTAAACCAAAATAAAGAGCTAAACAATAAAATAATCATGGGAGAGCCAATTAATGATT TAGACGAATTTGATAAAATAAATCCAATGACACCAGTAGAAATAACAAGAGGTTGCCCCCATAAATGCGGTTTCTGTCAA ACTCCTCAAATATTCGGCAATAAAGTAAGGCATAGAAGTATTGATAATATTTTAAAATCAATTAATCCAAATAGTGATGT TAGACTAATCACCCCCAATGCCTTTTGCTATGGCTCAGAAACTGGAACAAAACCAAATATTGAAAAATTAGAATTGTTAT TAAAAAAATTAAGGGAAGGAAAAGGAAAACTATTTTTTGGAACATTTCCATCAGAAGTTAGGCCCGAATTTATTCAAAAA GATACCATTGAGTTAGTTGCCAAATATTGCCATAACAAATATTTACATTTTGGAGCTCAAAGCGGTAGCGATGAAATGTT AAAATTAATAAGGAGGGGGCATACTGTAAATGATGTTTTAAATGGGGTTGATTTATGCAAGGATTATAATTTAATTCCAA AGGTGGATTTTATATTTGGATTTCCCAATGAAAATGAATTTCATAGAAAGGAAAGCATGGAGCTCCTAAATTATATAATA AAAAAAGGCGGAAAAGTTCATGCACATTATTTTATGCCTTTGGTCGGAACGAATTTTGAGGGGAGCTCCCCGACACCACT TGATAAAAAAACATTAAAAACATTAGGGCAATTATCACAAAAAGGGCTTGTTAGTGGTTCGTGGAGTTATCAAAGAGATG TGCAAAATATACAATAA
Upstream 100 bases:
>100_bases TATCAATATTTGCTTTGAGAAACGAAAAATAAACTGTTTTTGGCTATTCTATAATATGCATATTTTTAATATTAATATAT AAAAATAATTTGGTGTTTTT
Downstream 100 bases:
>100_bases TATGACATAGGCATGTGTGTTTTGGGAGCTCCTATCACTATAATATATAGTTATATATTTATTTCTTTTTTATTTATCGT GTTATATGTATTTCTAAATC
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MIGFKLTPKNRYSVSKLYPIIGGKLFKNFNEIMEHIKNGKLNILIYSFTSLQRDKIAKEIEIINKIKKEKKSTHPILIAG GPHPSGAPNDTLKIGFDYVIVGEGEITLPKIISKLNQNKELNNKIIMGEPINDLDEFDKINPMTPVEITRGCPHKCGFCQ TPQIFGNKVRHRSIDNILKSINPNSDVRLITPNAFCYGSETGTKPNIEKLELLLKKLREGKGKLFFGTFPSEVRPEFIQK DTIELVAKYCHNKYLHFGAQSGSDEMLKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFGFPNENEFHRKESMELLNYII KKGGKVHAHYFMPLVGTNFEGSSPTPLDKKTLKTLGQLSQKGLVSGSWSYQRDVQNIQ
Sequences:
>Translated_378_residues MIGFKLTPKNRYSVSKLYPIIGGKLFKNFNEIMEHIKNGKLNILIYSFTSLQRDKIAKEIEIINKIKKEKKSTHPILIAG GPHPSGAPNDTLKIGFDYVIVGEGEITLPKIISKLNQNKELNNKIIMGEPINDLDEFDKINPMTPVEITRGCPHKCGFCQ TPQIFGNKVRHRSIDNILKSINPNSDVRLITPNAFCYGSETGTKPNIEKLELLLKKLREGKGKLFFGTFPSEVRPEFIQK DTIELVAKYCHNKYLHFGAQSGSDEMLKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFGFPNENEFHRKESMELLNYII KKGGKVHAHYFMPLVGTNFEGSSPTPLDKKTLKTLGQLSQKGLVSGSWSYQRDVQNIQ >Mature_378_residues MIGFKLTPKNRYSVSKLYPIIGGKLFKNFNEIMEHIKNGKLNILIYSFTSLQRDKIAKEIEIINKIKKEKKSTHPILIAG GPHPSGAPNDTLKIGFDYVIVGEGEITLPKIISKLNQNKELNNKIIMGEPINDLDEFDKINPMTPVEITRGCPHKCGFCQ TPQIFGNKVRHRSIDNILKSINPNSDVRLITPNAFCYGSETGTKPNIEKLELLLKKLREGKGKLFFGTFPSEVRPEFIQK DTIELVAKYCHNKYLHFGAQSGSDEMLKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFGFPNENEFHRKESMELLNYII KKGGKVHAHYFMPLVGTNFEGSSPTPLDKKTLKTLGQLSQKGLVSGSWSYQRDVQNIQ
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 42817; Mature: 42817
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGFKLTPKNRYSVSKLYPIIGGKLFKNFNEIMEHIKNGKLNILIYSFTSLQRDKIAKEI CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH EIINKIKKEKKSTHPILIAGGPHPSGAPNDTLKIGFDYVIVGEGEITLPKIISKLNQNKE HHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCCC LNNKIIMGEPINDLDEFDKINPMTPVEITRGCPHKCGFCQTPQIFGNKVRHRSIDNILKS CCCEEEECCCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH INPNSDVRLITPNAFCYGSETGTKPNIEKLELLLKKLREGKGKLFFGTFPSEVRPEFIQK CCCCCCEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHCHHHHHH DTIELVAKYCHNKYLHFGAQSGSDEMLKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFG HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEE FPNENEFHRKESMELLNYIIKKGGKVHAHYFMPLVGTNFEGSSPTPLDKKTLKTLGQLSQ CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH KGLVSGSWSYQRDVQNIQ CCCCCCCCHHHHHHHCCC >Mature Secondary Structure MIGFKLTPKNRYSVSKLYPIIGGKLFKNFNEIMEHIKNGKLNILIYSFTSLQRDKIAKEI CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH EIINKIKKEKKSTHPILIAGGPHPSGAPNDTLKIGFDYVIVGEGEITLPKIISKLNQNKE HHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCCC LNNKIIMGEPINDLDEFDKINPMTPVEITRGCPHKCGFCQTPQIFGNKVRHRSIDNILKS CCCEEEECCCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH INPNSDVRLITPNAFCYGSETGTKPNIEKLELLLKKLREGKGKLFFGTFPSEVRPEFIQK CCCCCCEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHCHHHHHH DTIELVAKYCHNKYLHFGAQSGSDEMLKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFG HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEE FPNENEFHRKESMELLNYIIKKGGKVHAHYFMPLVGTNFEGSSPTPLDKKTLKTLGQLSQ CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH KGLVSGSWSYQRDVQNIQ CCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]