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The map label for this gene is dapB

Identifier: 150401100

GI number: 150401100

Start: 686933

End: 687754

Strand: Reverse

Name: dapB

Synonym: Maeo_0670

Alternate gene names: 150401100

Gene position: 687754-686933 (Counterclockwise)

Preceding gene: 150401101

Following gene: 150401099

Centisome position: 43.82

GC content: 35.16

Gene sequence:

>822_bases
ATGATTAAAGTAATGGTCACAGGAGCTCTTGGAAGAATGGGGAGCTCCATAATAAAAACACTATGCGAAAATAAAGAAGA
TTATAAAGTTGTTGGGGCAATAGATGTGCCGAACCACCCTAAAAAAGGTATTGACATTGGGGAATTAATCGGCATTGGAA
ATATCGGAGCTCCATTAGAAACAGCCGATAACCTTGAAAAAGTTATAAAAGAAACCAGGCCAGATGTATTGGTAGATTTT
ACAGCTCCTGCACCCTGTGTAAATACTGTAAAAATAGCCTCGGAAAACAATGTAAATTTAGTTGTTGGGACAACAGGATT
TACAAATGAGCAAATGGAAGAAATGGAAGAGATAATAAATAAAAACAATATTGGAGCAGTTATCTCCCAAAATTATGCCA
TTGGAGTAAATATATTCTTTAAAACATTGGAATTATTGGCTCAAAAAATAGGAGATTATGATATTGAGATAGTGGAGATG
CACCATAAATTTAAGAAAGATGCACCAAGTGGAACGGCATTAAGGGCATTGGAAATAATACAAAATAATTTAAACAGAGA
CTCAAAGGCAATATATGGTAGAGAGGGATTAGTTGGAGAAAGAACAAAAGAAGAAATATGCATTCATGCTCTTAGGGGCG
GAGATGTTGTTGGAGACCACACCGTTATATTTGCAGGAGATGGAGAAAGGTTGGAGCTCACACATAAGGCAAGTAGCAGA
CAGGCATTTGTAAGTGGAGTGGTTTTAGCTGTAAAATATATAGCAGACAAAAAAGATGGAAAAATATACAATACTTTTGA
TGTATTGAATTTAAATGAATAA

Upstream 100 bases:

>100_bases
GCGTAAATATTTTATGCTTTGAGTGTAATAACATATATAAAATACCATACATTAAAGAAAAGAAGTTAAAAAGAAAATTA
AAAAATAATATGGTGAAAAA

Downstream 100 bases:

>100_bases
TTTGTTTTTGTTTTTAAATTATATTTTATTTTTTTATTTTTTAGTGATATTTGTGTTGCAAAGGGAGCTCCCTGTGGTAT
CGATATTAATATATAATAGC

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MIKVMVTGALGRMGSSIIKTLCENKEDYKVVGAIDVPNHPKKGIDIGELIGIGNIGAPLETADNLEKVIKETRPDVLVDF
TAPAPCVNTVKIASENNVNLVVGTTGFTNEQMEEMEEIINKNNIGAVISQNYAIGVNIFFKTLELLAQKIGDYDIEIVEM
HHKFKKDAPSGTALRALEIIQNNLNRDSKAIYGREGLVGERTKEEICIHALRGGDVVGDHTVIFAGDGERLELTHKASSR
QAFVSGVVLAVKYIADKKDGKIYNTFDVLNLNE

Sequences:

>Translated_273_residues
MIKVMVTGALGRMGSSIIKTLCENKEDYKVVGAIDVPNHPKKGIDIGELIGIGNIGAPLETADNLEKVIKETRPDVLVDF
TAPAPCVNTVKIASENNVNLVVGTTGFTNEQMEEMEEIINKNNIGAVISQNYAIGVNIFFKTLELLAQKIGDYDIEIVEM
HHKFKKDAPSGTALRALEIIQNNLNRDSKAIYGREGLVGERTKEEICIHALRGGDVVGDHTVIFAGDGERLELTHKASSR
QAFVSGVVLAVKYIADKKDGKIYNTFDVLNLNE
>Mature_273_residues
MIKVMVTGALGRMGSSIIKTLCENKEDYKVVGAIDVPNHPKKGIDIGELIGIGNIGAPLETADNLEKVIKETRPDVLVDF
TAPAPCVNTVKIASENNVNLVVGTTGFTNEQMEEMEEIINKNNIGAVISQNYAIGVNIFFKTLELLAQKIGDYDIEIVEM
HHKFKKDAPSGTALRALEIIQNNLNRDSKAIYGREGLVGERTKEEICIHALRGGDVVGDHTVIFAGDGERLELTHKASSR
QAFVSGVVLAVKYIADKKDGKIYNTFDVLNLNE

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family

Homologues:

Organism=Escherichia coli, GI1786214, Length=274, Percent_Identity=39.4160583941606, Blast_Score=179, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DAPB_META3 (A6UUT2)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324866.1
- STRING:   A6UUT2
- GeneID:   5326437
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0670
- eggNOG:   arNOG05038
- HOGENOM:   HBG594002
- OMA:   ISHESFS
- ProtClustDB:   PRK00048
- BioCyc:   MAEO419665:MAEO_0670-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00102
- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720
- PANTHER:   PTHR20836
- TIGRFAMs:   TIGR00036

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N

EC number: =1.3.1.26

Molecular weight: Translated: 29792; Mature: 29792

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVMVTGALGRMGSSIIKTLCENKEDYKVVGAIDVPNHPKKGIDIGELIGIGNIGAPLE
CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHEECCCCCCCCC
TADNLEKVIKETRPDVLVDFTAPAPCVNTVKIASENNVNLVVGTTGFTNEQMEEMEEIIN
CHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHC
KNNIGAVISQNYAIGVNIFFKTLELLAQKIGDYDIEIVEMHHKFKKDAPSGTALRALEII
CCCCCEEEECCEEEEHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHHHHHH
QNNLNRDSKAIYGREGLVGERTKEEICIHALRGGDVVGDHTVIFAGDGERLELTHKASSR
HHHCCCCCCEEECCCCCCCCCCHHHHHEEEECCCCEECCCEEEEECCCCEEEEEECCCCH
QAFVSGVVLAVKYIADKKDGKIYNTFDVLNLNE
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MIKVMVTGALGRMGSSIIKTLCENKEDYKVVGAIDVPNHPKKGIDIGELIGIGNIGAPLE
CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHEECCCCCCCCC
TADNLEKVIKETRPDVLVDFTAPAPCVNTVKIASENNVNLVVGTTGFTNEQMEEMEEIIN
CHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHC
KNNIGAVISQNYAIGVNIFFKTLELLAQKIGDYDIEIVEMHHKFKKDAPSGTALRALEII
CCCCCEEEECCEEEEHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHHHHHH
QNNLNRDSKAIYGREGLVGERTKEEICIHALRGGDVVGDHTVIFAGDGERLELTHKASSR
HHHCCCCCCEEECCCCCCCCCCHHHHHEEEECCCCEECCCEEEEECCCCEEEEEECCCCH
QAFVSGVVLAVKYIADKKDGKIYNTFDVLNLNE
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA