| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401066
Identifier: 150401066
GI number: 150401066
Start: 654229
End: 655047
Strand: Reverse
Name: 150401066
Synonym: Maeo_0636
Alternate gene names: NA
Gene position: 655047-654229 (Counterclockwise)
Preceding gene: 150401069
Following gene: 150401065
Centisome position: 41.74
GC content: 25.64
Gene sequence:
>819_bases ATGATAAAAAAATATCAAAAAATCGGAGATATATTATTGGTAAAAACCGATATATCTACTGAAGAAATAAATCAATTAGT AAATAAAACAAAGTGCAAAACAATATTAAAATATGACAATATTAAGGGGGAGCTCCGACAACCAAAAACAACCATAATAT ATGGAAATGAAACAGAAACGATACAAAAAGAATATAATATATTATTTAAAATTGATGTTTCAAAGATAATGTGGAGTATG GGAAATATTGACGAAAGAAAAAGAATGGCAGATATATCCAACCCAAATGAAGTAGTAATTGATATGTTTGCAGGAATAGG ATATTTCACCATACCAATGGCAAAATATTCAAAACCTAAAAAAATATATGCCCTTGAATTAAATCCTGATTCTTATCATT ATTTGGTGGAAAATATAAAATTAAATAAATTAAATGATGGTAACTGCAATAATAATAACAATAATGATAAGAACAATAAT AATAATAATAATAATAATAATAAAATTATACCAATATTGGGAGACAATAGGAAAGCCAACCTAAGAAATACAGCAGATAG AATAATTATGGGGTATGTATTAAAAACTGGTGAATTTTTAGATAAGGCATTTGAGTATTTGAAAGAAGATGGCGGTATAA TACATTATCATGACACAATAGCGGAAAAGATATTGGATAAAGAACCATATTCAAAAATAAAAAATATTGCGGAAAAAAAC AACTATAAAATTATTGACTATAAATTAAATAAAATAAAAAAATATTCTCCGGGGGTTTGGCATGTTGTGGCAGATGTGAA ATTTGAAACAACATTGTAA
Upstream 100 bases:
>100_bases TGGTAGTAGTTTTTAATAATATAATCACATACATAATCCATAATATCACACCATTAACTTTAATTATAATTTATAATTAT TATATATAAATTGTGAGAAT
Downstream 100 bases:
>100_bases ATATTTATTAATGTGTGCTACTCTCACATCACTATATATATTTTATGATTTGACATAAGAAATATATTATATATACTATT AAAATAAATGTGTATATTAC
Product: protein of unknown function Met10
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MIKKYQKIGDILLVKTDISTEEINQLVNKTKCKTILKYDNIKGELRQPKTTIIYGNETETIQKEYNILFKIDVSKIMWSM GNIDERKRMADISNPNEVVIDMFAGIGYFTIPMAKYSKPKKIYALELNPDSYHYLVENIKLNKLNDGNCNNNNNNDKNNN NNNNNNNKIIPILGDNRKANLRNTADRIIMGYVLKTGEFLDKAFEYLKEDGGIIHYHDTIAEKILDKEPYSKIKNIAEKN NYKIIDYKLNKIKKYSPGVWHVVADVKFETTL
Sequences:
>Translated_272_residues MIKKYQKIGDILLVKTDISTEEINQLVNKTKCKTILKYDNIKGELRQPKTTIIYGNETETIQKEYNILFKIDVSKIMWSM GNIDERKRMADISNPNEVVIDMFAGIGYFTIPMAKYSKPKKIYALELNPDSYHYLVENIKLNKLNDGNCNNNNNNDKNNN NNNNNNNKIIPILGDNRKANLRNTADRIIMGYVLKTGEFLDKAFEYLKEDGGIIHYHDTIAEKILDKEPYSKIKNIAEKN NYKIIDYKLNKIKKYSPGVWHVVADVKFETTL >Mature_272_residues MIKKYQKIGDILLVKTDISTEEINQLVNKTKCKTILKYDNIKGELRQPKTTIIYGNETETIQKEYNILFKIDVSKIMWSM GNIDERKRMADISNPNEVVIDMFAGIGYFTIPMAKYSKPKKIYALELNPDSYHYLVENIKLNKLNDGNCNNNNNNDKNNN NNNNNNNKIIPILGDNRKANLRNTADRIIMGYVLKTGEFLDKAFEYLKEDGGIIHYHDTIAEKILDKEPYSKIKNIAEKN NYKIIDYKLNKIKKYSPGVWHVVADVKFETTL
Specific function: Unknown
COG id: COG2520
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RNA methyltransferase trmD family [H]
Homologues:
Organism=Homo sapiens, GI157388919, Length=231, Percent_Identity=28.1385281385281, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI145275187, Length=172, Percent_Identity=29.6511627906977, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193207541, Length=204, Percent_Identity=26.4705882352941, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193207539, Length=204, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193207537, Length=128, Percent_Identity=31.25, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI212646412, Length=222, Percent_Identity=22.0720720720721, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6321861, Length=120, Percent_Identity=38.3333333333333, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003402 [H]
Pfam domain/function: PF02475 Met_10 [H]
EC number: NA
Molecular weight: Translated: 31554; Mature: 31554
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKYQKIGDILLVKTDISTEEINQLVNKTKCKTILKYDNIKGELRQPKTTIIYGNETET CCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHH IQKEYNILFKIDVSKIMWSMGNIDERKRMADISNPNEVVIDMFAGIGYFTIPMAKYSKPK HHHHCCEEEEEEHHHHHHHHCCHHHHHHHHCCCCCCCEEHHHHHCCCEEEEEHHHCCCCC KIYALELNPDSYHYLVENIKLNKLNDGNCNNNNNNDKNNNNNNNNNNKIIPILGDNRKAN EEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC LRNTADRIIMGYVLKTGEFLDKAFEYLKEDGGIIHYHDTIAEKILDKEPYSKIKNIAEKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHHHHHHHHHCC NYKIIDYKLNKIKKYSPGVWHVVADVKFETTL CEEEEEEEECHHHCCCCCEEEEEEEEEEEECC >Mature Secondary Structure MIKKYQKIGDILLVKTDISTEEINQLVNKTKCKTILKYDNIKGELRQPKTTIIYGNETET CCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHH IQKEYNILFKIDVSKIMWSMGNIDERKRMADISNPNEVVIDMFAGIGYFTIPMAKYSKPK HHHHCCEEEEEEHHHHHHHHCCHHHHHHHHCCCCCCCEEHHHHHCCCEEEEEHHHCCCCC KIYALELNPDSYHYLVENIKLNKLNDGNCNNNNNNDKNNNNNNNNNNKIIPILGDNRKAN EEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC LRNTADRIIMGYVLKTGEFLDKAFEYLKEDGGIIHYHDTIAEKILDKEPYSKIKNIAEKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHHHHHHHHHCC NYKIIDYKLNKIKKYSPGVWHVVADVKFETTL CEEEEEEEECHHHCCCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]