Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150400994

Identifier: 150400994

GI number: 150400994

Start: 579342

End: 581402

Strand: Reverse

Name: 150400994

Synonym: Maeo_0563

Alternate gene names: NA

Gene position: 581402-579342 (Counterclockwise)

Preceding gene: 150400996

Following gene: 150400992

Centisome position: 37.04

GC content: 29.26

Gene sequence:

>2061_bases
ATGAAAACAGAATTAACTAATGTAGATATATTTGTTGCAGTGCAGGAGCTCCAACAGATTATAAACGGAAAGCTTGATAA
AGCATTTTTAGTAAATTCTCAACAGGGAAAAGAATTAATTTTAAAAATCCATATTCCTGAAATTGGGACGCGAGAAATTG
TAGTCGGAGTTGGAAAACATAAATATATTACACTTACAGAATACAGCAGAGATAAACCACGAAATCCTCCATCTTTTGCC
ATGCTACTTAGAAAGCATCTTAAAAACATAAAAATTGTATCCGTTGAACAGCATAATTTTGATAGGATTATTAAAATTAA
ATTTCAATGGAATGAAATAGAATATATATTAGTTATAGAGCTATTTGGGGACGGAAATGTAATTTTATTGGATAAAGAAA
ATACAATTATATTGCCATTAAAAATAGAAAGATGGAGCACTAGAAAAATAGTTCCAAAAGAAATATATAAATTTCCACCA
CAAAGGGATTTAACACCATTTAATTTAAAATATGCCGTAGCTCAAAACATATTTAATGAGGAATTTAAAAAAGAGGAAAA
TAGAGATGCCGAATGTGTAAGAATAATATCCCGGATATTTGGACTTGCTGGAATTTATGCCGAAGAAATATGTAATTTAT
CAAATATGGATAAAAATATCAAAAATCCAACAGATGAGGGGATAAACAAATTATATGATGGGACAAAATTATTTTTTGAT
AAAGTATTTAATGAGAAAAAGCCACATATTGTGCTAAAAGATGATAAATATTTTTCTATTTCGCCGATTGAACTATTGAA
ATATGCAAATTATGATAAAAAATATTATGATAACTTTTTAACCGCAATGGACGATTATTTTTCAATATTTATATTAAAAA
CAGAAATCAAAAAACAGGAAACCAAAATCCAAAAAATGGTAAATAGGCAGGAAAGAATATTAAATAGTCAAATTGAATCC
TTAAAGAAATATGAGAAACAGGATATAGAAAATAAATTAAAAGGAGATTTGATTTATGCCAACTATGCTATGGTAGATGA
AATATTAAATACCATAATATCGGCACGGGAAAAATTGGAATGGAAAGAAATTAAGAAAATAGTTAAGCAAAATAAAGATA
ATCCTATATTGGGCAAAATTGTATCCATAAATGAGAAAAACGGAGAAATAATATTAAATTTAACTGTGGATTATGGGGAC
GGAGCTCCCATAACAAAAAATGTAATATTGGATATACGAAAAAATGCTTTTGAAAATGCTGATAATTATTATGGAAAATC
CAAAAAATTTAAGCATAAAATAAAAGGAGTTCATACGGCAATAGAGATTTCTGAAAAGAAACTTAAAAAATTAAAAATAC
AGGAAGAATCAGAAATGGAAACGCTGAAAGAAAAAGAAGAAACCACGATGGTTAAAAAGGAAAGAAAGAAAAGAAAATGG
TATGAAAAATTCAAATGGACTGTTATTAATGATTATCTTGTTATTGCGGGTAAAGATGCTTCAACAAATGAATCATTAAT
AAAAAGATATACCGAAAAAGACGATATTGTATTCCATACTCAAATGGCAGGAGCTCCCTTTACAGTTATAAAAGTTGATA
AATCAAAAGGCAATAAAACAATTGAAGAGCTATCGGAAGAAGAAAGAAACCATTTAATAAGCGAAACAGCAAAATATGCC
GTATCTCACTCAAAAGCTTGGAAATTGGGGCTTGGTAGTGCCGATGTTTATTGGGTAAAACCTGACCAAATATCCAAAAC
TGCGGAAAGTGGGGAATATCTTTCAAAAGGGGCATTTATGGTTAGGGGAAAGAGGAATTTCATAAGAAGTGCCATTCTTG
ACCTTGGAATTGGTATAATTGAATATGATGGAGAGGATAGGATAACTACGGCACCATCTGAAACCGTTAAGAACTTTAAA
AAATATGTGCTGATAAAACCTGCTAAAAAGAAAAAAGGAGAATTGATAAAAGAACTTAAAAATGAATTTAAAGAATATTC
TATTGATGACGAGGACATATTAAAAGTGCTTCCACCGGGAGAAAGCGATATAAAAAAATAA

Upstream 100 bases:

>100_bases
TATACAATATATTATTACTTATTTACTATATATATCATATTTTATTATGTTATATATTATGTTATTATGCTTTATTATAT
TATTTTATTTCGGTGAAATT

Downstream 100 bases:

>100_bases
ATAAAAATAATAAATATATAAAAAAATGTAAAAACCTTCGGTTTTTACTTTTATATCTTTTTATATTTTAGGGAGCTCCT
TTATAATTTTGTTGCATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MKTELTNVDIFVAVQELQQIINGKLDKAFLVNSQQGKELILKIHIPEIGTREIVVGVGKHKYITLTEYSRDKPRNPPSFA
MLLRKHLKNIKIVSVEQHNFDRIIKIKFQWNEIEYILVIELFGDGNVILLDKENTIILPLKIERWSTRKIVPKEIYKFPP
QRDLTPFNLKYAVAQNIFNEEFKKEENRDAECVRIISRIFGLAGIYAEEICNLSNMDKNIKNPTDEGINKLYDGTKLFFD
KVFNEKKPHIVLKDDKYFSISPIELLKYANYDKKYYDNFLTAMDDYFSIFILKTEIKKQETKIQKMVNRQERILNSQIES
LKKYEKQDIENKLKGDLIYANYAMVDEILNTIISAREKLEWKEIKKIVKQNKDNPILGKIVSINEKNGEIILNLTVDYGD
GAPITKNVILDIRKNAFENADNYYGKSKKFKHKIKGVHTAIEISEKKLKKLKIQEESEMETLKEKEETTMVKKERKKRKW
YEKFKWTVINDYLVIAGKDASTNESLIKRYTEKDDIVFHTQMAGAPFTVIKVDKSKGNKTIEELSEEERNHLISETAKYA
VSHSKAWKLGLGSADVYWVKPDQISKTAESGEYLSKGAFMVRGKRNFIRSAILDLGIGIIEYDGEDRITTAPSETVKNFK
KYVLIKPAKKKKGELIKELKNEFKEYSIDDEDILKVLPPGESDIKK

Sequences:

>Translated_686_residues
MKTELTNVDIFVAVQELQQIINGKLDKAFLVNSQQGKELILKIHIPEIGTREIVVGVGKHKYITLTEYSRDKPRNPPSFA
MLLRKHLKNIKIVSVEQHNFDRIIKIKFQWNEIEYILVIELFGDGNVILLDKENTIILPLKIERWSTRKIVPKEIYKFPP
QRDLTPFNLKYAVAQNIFNEEFKKEENRDAECVRIISRIFGLAGIYAEEICNLSNMDKNIKNPTDEGINKLYDGTKLFFD
KVFNEKKPHIVLKDDKYFSISPIELLKYANYDKKYYDNFLTAMDDYFSIFILKTEIKKQETKIQKMVNRQERILNSQIES
LKKYEKQDIENKLKGDLIYANYAMVDEILNTIISAREKLEWKEIKKIVKQNKDNPILGKIVSINEKNGEIILNLTVDYGD
GAPITKNVILDIRKNAFENADNYYGKSKKFKHKIKGVHTAIEISEKKLKKLKIQEESEMETLKEKEETTMVKKERKKRKW
YEKFKWTVINDYLVIAGKDASTNESLIKRYTEKDDIVFHTQMAGAPFTVIKVDKSKGNKTIEELSEEERNHLISETAKYA
VSHSKAWKLGLGSADVYWVKPDQISKTAESGEYLSKGAFMVRGKRNFIRSAILDLGIGIIEYDGEDRITTAPSETVKNFK
KYVLIKPAKKKKGELIKELKNEFKEYSIDDEDILKVLPPGESDIKK
>Mature_686_residues
MKTELTNVDIFVAVQELQQIINGKLDKAFLVNSQQGKELILKIHIPEIGTREIVVGVGKHKYITLTEYSRDKPRNPPSFA
MLLRKHLKNIKIVSVEQHNFDRIIKIKFQWNEIEYILVIELFGDGNVILLDKENTIILPLKIERWSTRKIVPKEIYKFPP
QRDLTPFNLKYAVAQNIFNEEFKKEENRDAECVRIISRIFGLAGIYAEEICNLSNMDKNIKNPTDEGINKLYDGTKLFFD
KVFNEKKPHIVLKDDKYFSISPIELLKYANYDKKYYDNFLTAMDDYFSIFILKTEIKKQETKIQKMVNRQERILNSQIES
LKKYEKQDIENKLKGDLIYANYAMVDEILNTIISAREKLEWKEIKKIVKQNKDNPILGKIVSINEKNGEIILNLTVDYGD
GAPITKNVILDIRKNAFENADNYYGKSKKFKHKIKGVHTAIEISEKKLKKLKIQEESEMETLKEKEETTMVKKERKKRKW
YEKFKWTVINDYLVIAGKDASTNESLIKRYTEKDDIVFHTQMAGAPFTVIKVDKSKGNKTIEELSEEERNHLISETAKYA
VSHSKAWKLGLGSADVYWVKPDQISKTAESGEYLSKGAFMVRGKRNFIRSAILDLGIGIIEYDGEDRITTAPSETVKNFK
KYVLIKPAKKKKGELIKELKNEFKEYSIDDEDILKVLPPGESDIKK

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32130516, Length=699, Percent_Identity=27.1816881258941, Blast_Score=174, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI32565397, Length=674, Percent_Identity=28.0415430267062, Blast_Score=206, Evalue=4e-53,
Organism=Saccharomyces cerevisiae, GI6325248, Length=142, Percent_Identity=35.2112676056338, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281362530, Length=375, Percent_Identity=30.6666666666667, Blast_Score=155, Evalue=1e-37,
Organism=Drosophila melanogaster, GI281362528, Length=375, Percent_Identity=30.6666666666667, Blast_Score=155, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616
- InterPro:   IPR010979 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 79786; Mature: 79786

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTELTNVDIFVAVQELQQIINGKLDKAFLVNSQQGKELILKIHIPEIGTREIVVGVGKH
CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCC
KYITLTEYSRDKPRNPPSFAMLLRKHLKNIKIVSVEQHNFDRIIKIKFQWNEIEYILVIE
EEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCEEEEEEEE
LFGDGNVILLDKENTIILPLKIERWSTRKIVPKEIYKFPPQRDLTPFNLKYAVAQNIFNE
EECCCCEEEEECCCEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
EFKKEENRDAECVRIISRIFGLAGIYAEEICNLSNMDKNIKNPTDEGINKLYDGTKLFFD
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHCCHHHHHH
KVFNEKKPHIVLKDDKYFSISPIELLKYANYDKKYYDNFLTAMDDYFSIFILKTEIKKQE
HHHCCCCCEEEEECCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEHHHHHHH
TKIQKMVNRQERILNSQIESLKKYEKQDIENKLKGDLIYANYAMVDEILNTIISAREKLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCC
WKEIKKIVKQNKDNPILGKIVSINEKNGEIILNLTVDYGDGAPITKNVILDIRKNAFENA
HHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC
DNYYGKSKKFKHKIKGVHTAIEISEKKLKKLKIQEESEMETLKEKEETTMVKKERKKRKW
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YEKFKWTVINDYLVIAGKDASTNESLIKRYTEKDDIVFHTQMAGAPFTVIKVDKSKGNKT
HHHHCEEEEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCHH
IEELSEEERNHLISETAKYAVSHSKAWKLGLGSADVYWVKPDQISKTAESGEYLSKGAFM
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHCCCHHHCCEEE
VRGKRNFIRSAILDLGIGIIEYDGEDRITTAPSETVKNFKKYVLIKPAKKKKGELIKELK
EECHHHHHHHHHHHCCCEEEEECCCCCEECCCHHHHHHHHHEEEEECCCHHHHHHHHHHH
NEFKEYSIDDEDILKVLPPGESDIKK
HHHHHCCCCHHHHHEECCCCHHHCCC
>Mature Secondary Structure
MKTELTNVDIFVAVQELQQIINGKLDKAFLVNSQQGKELILKIHIPEIGTREIVVGVGKH
CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCC
KYITLTEYSRDKPRNPPSFAMLLRKHLKNIKIVSVEQHNFDRIIKIKFQWNEIEYILVIE
EEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCEEEEEEEE
LFGDGNVILLDKENTIILPLKIERWSTRKIVPKEIYKFPPQRDLTPFNLKYAVAQNIFNE
EECCCCEEEEECCCEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
EFKKEENRDAECVRIISRIFGLAGIYAEEICNLSNMDKNIKNPTDEGINKLYDGTKLFFD
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHCCHHHHHH
KVFNEKKPHIVLKDDKYFSISPIELLKYANYDKKYYDNFLTAMDDYFSIFILKTEIKKQE
HHHCCCCCEEEEECCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEHHHHHHH
TKIQKMVNRQERILNSQIESLKKYEKQDIENKLKGDLIYANYAMVDEILNTIISAREKLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCC
WKEIKKIVKQNKDNPILGKIVSINEKNGEIILNLTVDYGDGAPITKNVILDIRKNAFENA
HHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC
DNYYGKSKKFKHKIKGVHTAIEISEKKLKKLKIQEESEMETLKEKEETTMVKKERKKRKW
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YEKFKWTVINDYLVIAGKDASTNESLIKRYTEKDDIVFHTQMAGAPFTVIKVDKSKGNKT
HHHHCEEEEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCHH
IEELSEEERNHLISETAKYAVSHSKAWKLGLGSADVYWVKPDQISKTAESGEYLSKGAFM
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHCCCHHHCCEEE
VRGKRNFIRSAILDLGIGIIEYDGEDRITTAPSETVKNFKKYVLIKPAKKKKGELIKELK
EECHHHHHHHHHHHCCCEEEEECCCCCEECCCHHHHHHHHHEEEEECCCHHHHHHHHHHH
NEFKEYSIDDEDILKVLPPGESDIKK
HHHHHCCCCHHHHHEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]