| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400994
Identifier: 150400994
GI number: 150400994
Start: 579342
End: 581402
Strand: Reverse
Name: 150400994
Synonym: Maeo_0563
Alternate gene names: NA
Gene position: 581402-579342 (Counterclockwise)
Preceding gene: 150400996
Following gene: 150400992
Centisome position: 37.04
GC content: 29.26
Gene sequence:
>2061_bases ATGAAAACAGAATTAACTAATGTAGATATATTTGTTGCAGTGCAGGAGCTCCAACAGATTATAAACGGAAAGCTTGATAA AGCATTTTTAGTAAATTCTCAACAGGGAAAAGAATTAATTTTAAAAATCCATATTCCTGAAATTGGGACGCGAGAAATTG TAGTCGGAGTTGGAAAACATAAATATATTACACTTACAGAATACAGCAGAGATAAACCACGAAATCCTCCATCTTTTGCC ATGCTACTTAGAAAGCATCTTAAAAACATAAAAATTGTATCCGTTGAACAGCATAATTTTGATAGGATTATTAAAATTAA ATTTCAATGGAATGAAATAGAATATATATTAGTTATAGAGCTATTTGGGGACGGAAATGTAATTTTATTGGATAAAGAAA ATACAATTATATTGCCATTAAAAATAGAAAGATGGAGCACTAGAAAAATAGTTCCAAAAGAAATATATAAATTTCCACCA CAAAGGGATTTAACACCATTTAATTTAAAATATGCCGTAGCTCAAAACATATTTAATGAGGAATTTAAAAAAGAGGAAAA TAGAGATGCCGAATGTGTAAGAATAATATCCCGGATATTTGGACTTGCTGGAATTTATGCCGAAGAAATATGTAATTTAT CAAATATGGATAAAAATATCAAAAATCCAACAGATGAGGGGATAAACAAATTATATGATGGGACAAAATTATTTTTTGAT AAAGTATTTAATGAGAAAAAGCCACATATTGTGCTAAAAGATGATAAATATTTTTCTATTTCGCCGATTGAACTATTGAA ATATGCAAATTATGATAAAAAATATTATGATAACTTTTTAACCGCAATGGACGATTATTTTTCAATATTTATATTAAAAA CAGAAATCAAAAAACAGGAAACCAAAATCCAAAAAATGGTAAATAGGCAGGAAAGAATATTAAATAGTCAAATTGAATCC TTAAAGAAATATGAGAAACAGGATATAGAAAATAAATTAAAAGGAGATTTGATTTATGCCAACTATGCTATGGTAGATGA AATATTAAATACCATAATATCGGCACGGGAAAAATTGGAATGGAAAGAAATTAAGAAAATAGTTAAGCAAAATAAAGATA ATCCTATATTGGGCAAAATTGTATCCATAAATGAGAAAAACGGAGAAATAATATTAAATTTAACTGTGGATTATGGGGAC GGAGCTCCCATAACAAAAAATGTAATATTGGATATACGAAAAAATGCTTTTGAAAATGCTGATAATTATTATGGAAAATC CAAAAAATTTAAGCATAAAATAAAAGGAGTTCATACGGCAATAGAGATTTCTGAAAAGAAACTTAAAAAATTAAAAATAC AGGAAGAATCAGAAATGGAAACGCTGAAAGAAAAAGAAGAAACCACGATGGTTAAAAAGGAAAGAAAGAAAAGAAAATGG TATGAAAAATTCAAATGGACTGTTATTAATGATTATCTTGTTATTGCGGGTAAAGATGCTTCAACAAATGAATCATTAAT AAAAAGATATACCGAAAAAGACGATATTGTATTCCATACTCAAATGGCAGGAGCTCCCTTTACAGTTATAAAAGTTGATA AATCAAAAGGCAATAAAACAATTGAAGAGCTATCGGAAGAAGAAAGAAACCATTTAATAAGCGAAACAGCAAAATATGCC GTATCTCACTCAAAAGCTTGGAAATTGGGGCTTGGTAGTGCCGATGTTTATTGGGTAAAACCTGACCAAATATCCAAAAC TGCGGAAAGTGGGGAATATCTTTCAAAAGGGGCATTTATGGTTAGGGGAAAGAGGAATTTCATAAGAAGTGCCATTCTTG ACCTTGGAATTGGTATAATTGAATATGATGGAGAGGATAGGATAACTACGGCACCATCTGAAACCGTTAAGAACTTTAAA AAATATGTGCTGATAAAACCTGCTAAAAAGAAAAAAGGAGAATTGATAAAAGAACTTAAAAATGAATTTAAAGAATATTC TATTGATGACGAGGACATATTAAAAGTGCTTCCACCGGGAGAAAGCGATATAAAAAAATAA
Upstream 100 bases:
>100_bases TATACAATATATTATTACTTATTTACTATATATATCATATTTTATTATGTTATATATTATGTTATTATGCTTTATTATAT TATTTTATTTCGGTGAAATT
Downstream 100 bases:
>100_bases ATAAAAATAATAAATATATAAAAAAATGTAAAAACCTTCGGTTTTTACTTTTATATCTTTTTATATTTTAGGGAGCTCCT TTATAATTTTGTTGCATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MKTELTNVDIFVAVQELQQIINGKLDKAFLVNSQQGKELILKIHIPEIGTREIVVGVGKHKYITLTEYSRDKPRNPPSFA MLLRKHLKNIKIVSVEQHNFDRIIKIKFQWNEIEYILVIELFGDGNVILLDKENTIILPLKIERWSTRKIVPKEIYKFPP QRDLTPFNLKYAVAQNIFNEEFKKEENRDAECVRIISRIFGLAGIYAEEICNLSNMDKNIKNPTDEGINKLYDGTKLFFD KVFNEKKPHIVLKDDKYFSISPIELLKYANYDKKYYDNFLTAMDDYFSIFILKTEIKKQETKIQKMVNRQERILNSQIES LKKYEKQDIENKLKGDLIYANYAMVDEILNTIISAREKLEWKEIKKIVKQNKDNPILGKIVSINEKNGEIILNLTVDYGD GAPITKNVILDIRKNAFENADNYYGKSKKFKHKIKGVHTAIEISEKKLKKLKIQEESEMETLKEKEETTMVKKERKKRKW YEKFKWTVINDYLVIAGKDASTNESLIKRYTEKDDIVFHTQMAGAPFTVIKVDKSKGNKTIEELSEEERNHLISETAKYA VSHSKAWKLGLGSADVYWVKPDQISKTAESGEYLSKGAFMVRGKRNFIRSAILDLGIGIIEYDGEDRITTAPSETVKNFK KYVLIKPAKKKKGELIKELKNEFKEYSIDDEDILKVLPPGESDIKK
Sequences:
>Translated_686_residues MKTELTNVDIFVAVQELQQIINGKLDKAFLVNSQQGKELILKIHIPEIGTREIVVGVGKHKYITLTEYSRDKPRNPPSFA MLLRKHLKNIKIVSVEQHNFDRIIKIKFQWNEIEYILVIELFGDGNVILLDKENTIILPLKIERWSTRKIVPKEIYKFPP QRDLTPFNLKYAVAQNIFNEEFKKEENRDAECVRIISRIFGLAGIYAEEICNLSNMDKNIKNPTDEGINKLYDGTKLFFD KVFNEKKPHIVLKDDKYFSISPIELLKYANYDKKYYDNFLTAMDDYFSIFILKTEIKKQETKIQKMVNRQERILNSQIES LKKYEKQDIENKLKGDLIYANYAMVDEILNTIISAREKLEWKEIKKIVKQNKDNPILGKIVSINEKNGEIILNLTVDYGD GAPITKNVILDIRKNAFENADNYYGKSKKFKHKIKGVHTAIEISEKKLKKLKIQEESEMETLKEKEETTMVKKERKKRKW YEKFKWTVINDYLVIAGKDASTNESLIKRYTEKDDIVFHTQMAGAPFTVIKVDKSKGNKTIEELSEEERNHLISETAKYA VSHSKAWKLGLGSADVYWVKPDQISKTAESGEYLSKGAFMVRGKRNFIRSAILDLGIGIIEYDGEDRITTAPSETVKNFK KYVLIKPAKKKKGELIKELKNEFKEYSIDDEDILKVLPPGESDIKK >Mature_686_residues MKTELTNVDIFVAVQELQQIINGKLDKAFLVNSQQGKELILKIHIPEIGTREIVVGVGKHKYITLTEYSRDKPRNPPSFA MLLRKHLKNIKIVSVEQHNFDRIIKIKFQWNEIEYILVIELFGDGNVILLDKENTIILPLKIERWSTRKIVPKEIYKFPP QRDLTPFNLKYAVAQNIFNEEFKKEENRDAECVRIISRIFGLAGIYAEEICNLSNMDKNIKNPTDEGINKLYDGTKLFFD KVFNEKKPHIVLKDDKYFSISPIELLKYANYDKKYYDNFLTAMDDYFSIFILKTEIKKQETKIQKMVNRQERILNSQIES LKKYEKQDIENKLKGDLIYANYAMVDEILNTIISAREKLEWKEIKKIVKQNKDNPILGKIVSINEKNGEIILNLTVDYGD GAPITKNVILDIRKNAFENADNYYGKSKKFKHKIKGVHTAIEISEKKLKKLKIQEESEMETLKEKEETTMVKKERKKRKW YEKFKWTVINDYLVIAGKDASTNESLIKRYTEKDDIVFHTQMAGAPFTVIKVDKSKGNKTIEELSEEERNHLISETAKYA VSHSKAWKLGLGSADVYWVKPDQISKTAESGEYLSKGAFMVRGKRNFIRSAILDLGIGIIEYDGEDRITTAPSETVKNFK KYVLIKPAKKKKGELIKELKNEFKEYSIDDEDILKVLPPGESDIKK
Specific function: Unknown
COG id: COG1293
COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32130516, Length=699, Percent_Identity=27.1816881258941, Blast_Score=174, Evalue=2e-43, Organism=Caenorhabditis elegans, GI32565397, Length=674, Percent_Identity=28.0415430267062, Blast_Score=206, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6325248, Length=142, Percent_Identity=35.2112676056338, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI281362530, Length=375, Percent_Identity=30.6666666666667, Blast_Score=155, Evalue=1e-37, Organism=Drosophila melanogaster, GI281362528, Length=375, Percent_Identity=30.6666666666667, Blast_Score=155, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008532 - InterPro: IPR008616 - InterPro: IPR010979 [H]
Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]
EC number: NA
Molecular weight: Translated: 79786; Mature: 79786
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTELTNVDIFVAVQELQQIINGKLDKAFLVNSQQGKELILKIHIPEIGTREIVVGVGKH CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCC KYITLTEYSRDKPRNPPSFAMLLRKHLKNIKIVSVEQHNFDRIIKIKFQWNEIEYILVIE EEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCEEEEEEEE LFGDGNVILLDKENTIILPLKIERWSTRKIVPKEIYKFPPQRDLTPFNLKYAVAQNIFNE EECCCCEEEEECCCEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHH EFKKEENRDAECVRIISRIFGLAGIYAEEICNLSNMDKNIKNPTDEGINKLYDGTKLFFD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHCCHHHHHH KVFNEKKPHIVLKDDKYFSISPIELLKYANYDKKYYDNFLTAMDDYFSIFILKTEIKKQE HHHCCCCCEEEEECCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEHHHHHHH TKIQKMVNRQERILNSQIESLKKYEKQDIENKLKGDLIYANYAMVDEILNTIISAREKLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCC WKEIKKIVKQNKDNPILGKIVSINEKNGEIILNLTVDYGDGAPITKNVILDIRKNAFENA HHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC DNYYGKSKKFKHKIKGVHTAIEISEKKLKKLKIQEESEMETLKEKEETTMVKKERKKRKW HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YEKFKWTVINDYLVIAGKDASTNESLIKRYTEKDDIVFHTQMAGAPFTVIKVDKSKGNKT HHHHCEEEEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCHH IEELSEEERNHLISETAKYAVSHSKAWKLGLGSADVYWVKPDQISKTAESGEYLSKGAFM HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHCCCHHHCCEEE VRGKRNFIRSAILDLGIGIIEYDGEDRITTAPSETVKNFKKYVLIKPAKKKKGELIKELK EECHHHHHHHHHHHCCCEEEEECCCCCEECCCHHHHHHHHHEEEEECCCHHHHHHHHHHH NEFKEYSIDDEDILKVLPPGESDIKK HHHHHCCCCHHHHHEECCCCHHHCCC >Mature Secondary Structure MKTELTNVDIFVAVQELQQIINGKLDKAFLVNSQQGKELILKIHIPEIGTREIVVGVGKH CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCC KYITLTEYSRDKPRNPPSFAMLLRKHLKNIKIVSVEQHNFDRIIKIKFQWNEIEYILVIE EEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCEEEEEEEE LFGDGNVILLDKENTIILPLKIERWSTRKIVPKEIYKFPPQRDLTPFNLKYAVAQNIFNE EECCCCEEEEECCCEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHH EFKKEENRDAECVRIISRIFGLAGIYAEEICNLSNMDKNIKNPTDEGINKLYDGTKLFFD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHCCHHHHHH KVFNEKKPHIVLKDDKYFSISPIELLKYANYDKKYYDNFLTAMDDYFSIFILKTEIKKQE HHHCCCCCEEEEECCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEHHHHHHH TKIQKMVNRQERILNSQIESLKKYEKQDIENKLKGDLIYANYAMVDEILNTIISAREKLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCC WKEIKKIVKQNKDNPILGKIVSINEKNGEIILNLTVDYGDGAPITKNVILDIRKNAFENA HHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC DNYYGKSKKFKHKIKGVHTAIEISEKKLKKLKIQEESEMETLKEKEETTMVKKERKKRKW HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YEKFKWTVINDYLVIAGKDASTNESLIKRYTEKDDIVFHTQMAGAPFTVIKVDKSKGNKT HHHHCEEEEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCHH IEELSEEERNHLISETAKYAVSHSKAWKLGLGSADVYWVKPDQISKTAESGEYLSKGAFM HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHCCCHHHCCEEE VRGKRNFIRSAILDLGIGIIEYDGEDRITTAPSETVKNFKKYVLIKPAKKKKGELIKELK EECHHHHHHHHHHHCCCEEEEECCCCCEECCCHHHHHHHHHEEEEECCCHHHHHHHHHHH NEFKEYSIDDEDILKVLPPGESDIKK HHHHHCCCCHHHHHEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]