| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is gsiC [H]
Identifier: 150400943
GI number: 150400943
Start: 532019
End: 532963
Strand: Reverse
Name: gsiC [H]
Synonym: Maeo_0511
Alternate gene names: 150400943
Gene position: 532963-532019 (Counterclockwise)
Preceding gene: 150400944
Following gene: 150400942
Centisome position: 33.96
GC content: 34.18
Gene sequence:
>945_bases ATGAAAAATTTTATATTAAGGAGGTTATTTTTGGCAATACCAATGGCAATAGCTGTTTCATTGATTTCATTTTCATTACT TTACTTTTCCCCGGGGAATCCCGCAGAAATCATATTGGAGCAGAAATCACCAGATTCCAGTCCTGATGAAAATGCAATTA AAGAATATGAGAAAAAACTTGGACTAGATAAGCCTTTTTATGATTTATATGTAATATGGCTTAGCAAAGCATTAACAGGA GATTTTGGAGTTTCCCTTCAAAATGGCGAGCCAGTTATAGATGAGTTTATGGCAAGATTTCCATATACTGTTATGATTAT GGTCGGTGCTACTACTGTTTATTTTGTGCTGGGGGTTGTAATGGGTATATTATCTGCACTTAACAAAGATGGCATAATTG ATAATATAGTCAGAGCTTATGCATCATTAAAAATGGCTATCCCAAGCTTTTGGTTGGCATTGTTGTTAATATGGGTATTT TCTGTTAAACTTAAAATTATTAGTGCATTTGGATATAATGGGCTTGATAGTTTAATACTACCTTCCTTTGCTCTTGGTCT AGGCATGGCAGGTTCTCTAGCAAGGGTTTTGAGAACATGCATCCTTGAAGTCATGAGTAGTGATTATATTTTAACTGCAA GGGCGAAGGGACTTTCAAATAAGGTTGTTGTATTGAAACATGTATTAAAAAATGCCTTTCTACCAGTTATAACATTAATG GGGATGAAAACAGCCTATTTACTTGGAGGTGCCGTCATAATTGAAAGTATATTTGGATGGCCAGGTATTGGAAGTTATTT TATCGATATAATCAATGCAAAAGATTATCCTGCGGTTTCTGGACTTGTATTTATATTTGGAATTCTATTTGTTCTTGTTA ATTTAATCGTGGATATATCTTATGCCATATTAGACCCGAGAGTGAGATACGATAAAGGTGTATAA
Upstream 100 bases:
>100_bases GATGTGGGATATATTGATTTAAGCAATGTTGTAATTAAATAAAAAATAACTAAATAATCAAATAAACAAATTATCTCTTT TTATTTTTTAAGGTGAGCTC
Downstream 100 bases:
>100_bases AAAATGAACGCCAATAAAAAGTTTGCTTTATGTTTGGCAGGTGTTGCTGTCATATTTATTATTTCATTGCTCTCTCCATA CATATTCAAAGATGTAAATG
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKNFILRRLFLAIPMAIAVSLISFSLLYFSPGNPAEIILEQKSPDSSPDENAIKEYEKKLGLDKPFYDLYVIWLSKALTG DFGVSLQNGEPVIDEFMARFPYTVMIMVGATTVYFVLGVVMGILSALNKDGIIDNIVRAYASLKMAIPSFWLALLLIWVF SVKLKIISAFGYNGLDSLILPSFALGLGMAGSLARVLRTCILEVMSSDYILTARAKGLSNKVVVLKHVLKNAFLPVITLM GMKTAYLLGGAVIIESIFGWPGIGSYFIDIINAKDYPAVSGLVFIFGILFVLVNLIVDISYAILDPRVRYDKGV
Sequences:
>Translated_314_residues MKNFILRRLFLAIPMAIAVSLISFSLLYFSPGNPAEIILEQKSPDSSPDENAIKEYEKKLGLDKPFYDLYVIWLSKALTG DFGVSLQNGEPVIDEFMARFPYTVMIMVGATTVYFVLGVVMGILSALNKDGIIDNIVRAYASLKMAIPSFWLALLLIWVF SVKLKIISAFGYNGLDSLILPSFALGLGMAGSLARVLRTCILEVMSSDYILTARAKGLSNKVVVLKHVLKNAFLPVITLM GMKTAYLLGGAVIIESIFGWPGIGSYFIDIINAKDYPAVSGLVFIFGILFVLVNLIVDISYAILDPRVRYDKGV >Mature_314_residues MKNFILRRLFLAIPMAIAVSLISFSLLYFSPGNPAEIILEQKSPDSSPDENAIKEYEKKLGLDKPFYDLYVIWLSKALTG DFGVSLQNGEPVIDEFMARFPYTVMIMVGATTVYFVLGVVMGILSALNKDGIIDNIVRAYASLKMAIPSFWLALLLIWVF SVKLKIISAFGYNGLDSLILPSFALGLGMAGSLARVLRTCILEVMSSDYILTARAKGLSNKVVVLKHVLKNAFLPVITLM GMKTAYLLGGAVIIESIFGWPGIGSYFIDIINAKDYPAVSGLVFIFGILFVLVNLIVDISYAILDPRVRYDKGV
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787053, Length=310, Percent_Identity=37.0967741935484, Blast_Score=232, Evalue=2e-62, Organism=Escherichia coli, GI1789888, Length=313, Percent_Identity=38.3386581469649, Blast_Score=224, Evalue=8e-60, Organism=Escherichia coli, GI1789965, Length=343, Percent_Identity=33.5276967930029, Blast_Score=214, Evalue=6e-57, Organism=Escherichia coli, GI1787497, Length=313, Percent_Identity=35.7827476038339, Blast_Score=180, Evalue=1e-46, Organism=Escherichia coli, GI1787761, Length=339, Percent_Identity=33.6283185840708, Blast_Score=171, Evalue=7e-44, Organism=Escherichia coli, GI1787550, Length=334, Percent_Identity=28.4431137724551, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1788504, Length=365, Percent_Identity=26.8493150684932, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34534; Mature: 34534
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFILRRLFLAIPMAIAVSLISFSLLYFSPGNPAEIILEQKSPDSSPDENAIKEYEKKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHC GLDKPFYDLYVIWLSKALTGDFGVSLQNGEPVIDEFMARFPYTVMIMVGATTVYFVLGVV CCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCHHEEHHHHHHHHHHHHHHH MGILSALNKDGIIDNIVRAYASLKMAIPSFWLALLLIWVFSVKLKIISAFGYNGLDSLIL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH PSFALGLGMAGSLARVLRTCILEVMSSDYILTARAKGLSNKVVVLKHVLKNAFLPVITLM HHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH GMKTAYLLGGAVIIESIFGWPGIGSYFIDIINAKDYPAVSGLVFIFGILFVLVNLIVDIS HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YAILDPRVRYDKGV HHHHCCCHHCCCCC >Mature Secondary Structure MKNFILRRLFLAIPMAIAVSLISFSLLYFSPGNPAEIILEQKSPDSSPDENAIKEYEKKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHC GLDKPFYDLYVIWLSKALTGDFGVSLQNGEPVIDEFMARFPYTVMIMVGATTVYFVLGVV CCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCHHEEHHHHHHHHHHHHHHH MGILSALNKDGIIDNIVRAYASLKMAIPSFWLALLLIWVFSVKLKIISAFGYNGLDSLIL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH PSFALGLGMAGSLARVLRTCILEVMSSDYILTARAKGLSNKVVVLKHVLKNAFLPVITLM HHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH GMKTAYLLGGAVIIESIFGWPGIGSYFIDIINAKDYPAVSGLVFIFGILFVLVNLIVDIS HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YAILDPRVRYDKGV HHHHCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]