| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400937
Identifier: 150400937
GI number: 150400937
Start: 525742
End: 526668
Strand: Reverse
Name: 150400937
Synonym: Maeo_0505
Alternate gene names: NA
Gene position: 526668-525742 (Counterclockwise)
Preceding gene: 150400938
Following gene: 150400936
Centisome position: 33.56
GC content: 28.91
Gene sequence:
>927_bases TTGGATATATTATCTTATTTAACCCAAATAATTATTTTATCATCGGTTGGGATTATTATTGCAGGAATCATTGAGGAAAC GAATCTGTTATCCATAATTAAGAAAATAACAAAACCATTATGTTTAATCTCAAATTTACCTGAGGAGTGTGTAGTAGCAT TGTTGGGGAATTTTATAAATCCAACAGTTGGAAAATCGATGCTTGCCAAATTCTATAAAGATAATAAAATAAACAATAAA GAGACAATAGCCACCGCAATAATAAGCCCATTGCCGATAATTTTGGGAGAAAGTATATTTAGGGTGCAACTACCACTTGC CATTGTCTTTCTCGGATATAAATTAGGAATAATATATGTTCTTTTTAATATGTTTTCTGGATTTTTAATGGCTTCAATTG GAATTATATATTCAAATATCTTTTTTGAAAGGAAACCAATAAACATCAATACCAACAACAATGAAAAAATTATATTCAAT AGGGAAGTTATTACGAAAGGTGTTATGAAATCTGTAGAGCTCCTAAAAAAAGTAATTCCTATGATTGTAATATTTACATT ACTAATATATTGCCTAATGACTTTTGGTTTAACGGATATTGTAAAAGAGATATTTACGCCATTATTTGGCATACTAAATT TACCGGGAGAAGCAGTAATGGTTTTAGTTGCAAATTTTGCCCATTTCTCCGCAGGATATGCTACTGTAGATATTTTGATA AAAAATGGAGCCCTAAACGAAAAACAGGCATTACTAACGCTGTTAATTGGAAATATAATTGGAATATCTATGATATATTT GAAGCACTCCATCGGGACCTATGTTGCATTATTTGGTAGATTTGGTCTAAAATTAGCTATGATTAATTATACTATATCAA TTATTGTAAAAATTTTACTAATAATGCTTGTAATGTTATTACTTTAA
Upstream 100 bases:
>100_bases TAATGTTAATTTTATTCGCAAATTAATCTTATTTACAACATATTATTTTTTATTTTATTATTGTTATTTATATTTACTAA AAGGCATAAGGGCGATACCA
Downstream 100 bases:
>100_bases AGATTAAAAAAATAAAATAGAATAGTCGAAACTAAAAAATAAGAAAAAAATTCTTACGGATTTTATAGCTCGAAACTCAC TTGTTTGTTTCGATGTACAT
Product: nucleoside recognition domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MDILSYLTQIIILSSVGIIIAGIIEETNLLSIIKKITKPLCLISNLPEECVVALLGNFINPTVGKSMLAKFYKDNKINNK ETIATAIISPLPIILGESIFRVQLPLAIVFLGYKLGIIYVLFNMFSGFLMASIGIIYSNIFFERKPININTNNNEKIIFN REVITKGVMKSVELLKKVIPMIVIFTLLIYCLMTFGLTDIVKEIFTPLFGILNLPGEAVMVLVANFAHFSAGYATVDILI KNGALNEKQALLTLLIGNIIGISMIYLKHSIGTYVALFGRFGLKLAMINYTISIIVKILLIMLVMLLL
Sequences:
>Translated_308_residues MDILSYLTQIIILSSVGIIIAGIIEETNLLSIIKKITKPLCLISNLPEECVVALLGNFINPTVGKSMLAKFYKDNKINNK ETIATAIISPLPIILGESIFRVQLPLAIVFLGYKLGIIYVLFNMFSGFLMASIGIIYSNIFFERKPININTNNNEKIIFN REVITKGVMKSVELLKKVIPMIVIFTLLIYCLMTFGLTDIVKEIFTPLFGILNLPGEAVMVLVANFAHFSAGYATVDILI KNGALNEKQALLTLLIGNIIGISMIYLKHSIGTYVALFGRFGLKLAMINYTISIIVKILLIMLVMLLL >Mature_308_residues MDILSYLTQIIILSSVGIIIAGIIEETNLLSIIKKITKPLCLISNLPEECVVALLGNFINPTVGKSMLAKFYKDNKINNK ETIATAIISPLPIILGESIFRVQLPLAIVFLGYKLGIIYVLFNMFSGFLMASIGIIYSNIFFERKPININTNNNEKIIFN REVITKGVMKSVELLKKVIPMIVIFTLLIYCLMTFGLTDIVKEIFTPLFGILNLPGEAVMVLVANFAHFSAGYATVDILI KNGALNEKQALLTLLIGNIIGISMIYLKHSIGTYVALFGRFGLKLAMINYTISIIVKILLIMLVMLLL
Specific function: Unknown
COG id: COG3366
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0871, MJ1556 and MJ1589 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011642 [H]
Pfam domain/function: PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 34139; Mature: 34139
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILSYLTQIIILSSVGIIIAGIIEETNLLSIIKKITKPLCLISNLPEECVVALLGNFIN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC PTVGKSMLAKFYKDNKINNKETIATAIISPLPIILGESIFRVQLPLAIVFLGYKLGIIYV CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LFNMFSGFLMASIGIIYSNIFFERKPININTNNNEKIIFNREVITKGVMKSVELLKKVIP HHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH MIVIFTLLIYCLMTFGLTDIVKEIFTPLFGILNLPGEAVMVLVANFAHFSAGYATVDILI HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHEEEEEE KNGALNEKQALLTLLIGNIIGISMIYLKHSIGTYVALFGRFGLKLAMINYTISIIVKILL ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMLVMLLL HHHHHHHC >Mature Secondary Structure MDILSYLTQIIILSSVGIIIAGIIEETNLLSIIKKITKPLCLISNLPEECVVALLGNFIN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC PTVGKSMLAKFYKDNKINNKETIATAIISPLPIILGESIFRVQLPLAIVFLGYKLGIIYV CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LFNMFSGFLMASIGIIYSNIFFERKPININTNNNEKIIFNREVITKGVMKSVELLKKVIP HHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH MIVIFTLLIYCLMTFGLTDIVKEIFTPLFGILNLPGEAVMVLVANFAHFSAGYATVDILI HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHEEEEEE KNGALNEKQALLTLLIGNIIGISMIYLKHSIGTYVALFGRFGLKLAMINYTISIIVKILL ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMLVMLLL HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]