Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150400937

Identifier: 150400937

GI number: 150400937

Start: 525742

End: 526668

Strand: Reverse

Name: 150400937

Synonym: Maeo_0505

Alternate gene names: NA

Gene position: 526668-525742 (Counterclockwise)

Preceding gene: 150400938

Following gene: 150400936

Centisome position: 33.56

GC content: 28.91

Gene sequence:

>927_bases
TTGGATATATTATCTTATTTAACCCAAATAATTATTTTATCATCGGTTGGGATTATTATTGCAGGAATCATTGAGGAAAC
GAATCTGTTATCCATAATTAAGAAAATAACAAAACCATTATGTTTAATCTCAAATTTACCTGAGGAGTGTGTAGTAGCAT
TGTTGGGGAATTTTATAAATCCAACAGTTGGAAAATCGATGCTTGCCAAATTCTATAAAGATAATAAAATAAACAATAAA
GAGACAATAGCCACCGCAATAATAAGCCCATTGCCGATAATTTTGGGAGAAAGTATATTTAGGGTGCAACTACCACTTGC
CATTGTCTTTCTCGGATATAAATTAGGAATAATATATGTTCTTTTTAATATGTTTTCTGGATTTTTAATGGCTTCAATTG
GAATTATATATTCAAATATCTTTTTTGAAAGGAAACCAATAAACATCAATACCAACAACAATGAAAAAATTATATTCAAT
AGGGAAGTTATTACGAAAGGTGTTATGAAATCTGTAGAGCTCCTAAAAAAAGTAATTCCTATGATTGTAATATTTACATT
ACTAATATATTGCCTAATGACTTTTGGTTTAACGGATATTGTAAAAGAGATATTTACGCCATTATTTGGCATACTAAATT
TACCGGGAGAAGCAGTAATGGTTTTAGTTGCAAATTTTGCCCATTTCTCCGCAGGATATGCTACTGTAGATATTTTGATA
AAAAATGGAGCCCTAAACGAAAAACAGGCATTACTAACGCTGTTAATTGGAAATATAATTGGAATATCTATGATATATTT
GAAGCACTCCATCGGGACCTATGTTGCATTATTTGGTAGATTTGGTCTAAAATTAGCTATGATTAATTATACTATATCAA
TTATTGTAAAAATTTTACTAATAATGCTTGTAATGTTATTACTTTAA

Upstream 100 bases:

>100_bases
TAATGTTAATTTTATTCGCAAATTAATCTTATTTACAACATATTATTTTTTATTTTATTATTGTTATTTATATTTACTAA
AAGGCATAAGGGCGATACCA

Downstream 100 bases:

>100_bases
AGATTAAAAAAATAAAATAGAATAGTCGAAACTAAAAAATAAGAAAAAAATTCTTACGGATTTTATAGCTCGAAACTCAC
TTGTTTGTTTCGATGTACAT

Product: nucleoside recognition domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MDILSYLTQIIILSSVGIIIAGIIEETNLLSIIKKITKPLCLISNLPEECVVALLGNFINPTVGKSMLAKFYKDNKINNK
ETIATAIISPLPIILGESIFRVQLPLAIVFLGYKLGIIYVLFNMFSGFLMASIGIIYSNIFFERKPININTNNNEKIIFN
REVITKGVMKSVELLKKVIPMIVIFTLLIYCLMTFGLTDIVKEIFTPLFGILNLPGEAVMVLVANFAHFSAGYATVDILI
KNGALNEKQALLTLLIGNIIGISMIYLKHSIGTYVALFGRFGLKLAMINYTISIIVKILLIMLVMLLL

Sequences:

>Translated_308_residues
MDILSYLTQIIILSSVGIIIAGIIEETNLLSIIKKITKPLCLISNLPEECVVALLGNFINPTVGKSMLAKFYKDNKINNK
ETIATAIISPLPIILGESIFRVQLPLAIVFLGYKLGIIYVLFNMFSGFLMASIGIIYSNIFFERKPININTNNNEKIIFN
REVITKGVMKSVELLKKVIPMIVIFTLLIYCLMTFGLTDIVKEIFTPLFGILNLPGEAVMVLVANFAHFSAGYATVDILI
KNGALNEKQALLTLLIGNIIGISMIYLKHSIGTYVALFGRFGLKLAMINYTISIIVKILLIMLVMLLL
>Mature_308_residues
MDILSYLTQIIILSSVGIIIAGIIEETNLLSIIKKITKPLCLISNLPEECVVALLGNFINPTVGKSMLAKFYKDNKINNK
ETIATAIISPLPIILGESIFRVQLPLAIVFLGYKLGIIYVLFNMFSGFLMASIGIIYSNIFFERKPININTNNNEKIIFN
REVITKGVMKSVELLKKVIPMIVIFTLLIYCLMTFGLTDIVKEIFTPLFGILNLPGEAVMVLVANFAHFSAGYATVDILI
KNGALNEKQALLTLLIGNIIGISMIYLKHSIGTYVALFGRFGLKLAMINYTISIIVKILLIMLVMLLL

Specific function: Unknown

COG id: COG3366

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0871, MJ1556 and MJ1589 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 34139; Mature: 34139

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILSYLTQIIILSSVGIIIAGIIEETNLLSIIKKITKPLCLISNLPEECVVALLGNFIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PTVGKSMLAKFYKDNKINNKETIATAIISPLPIILGESIFRVQLPLAIVFLGYKLGIIYV
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LFNMFSGFLMASIGIIYSNIFFERKPININTNNNEKIIFNREVITKGVMKSVELLKKVIP
HHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
MIVIFTLLIYCLMTFGLTDIVKEIFTPLFGILNLPGEAVMVLVANFAHFSAGYATVDILI
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHEEEEEE
KNGALNEKQALLTLLIGNIIGISMIYLKHSIGTYVALFGRFGLKLAMINYTISIIVKILL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLVMLLL
HHHHHHHC
>Mature Secondary Structure
MDILSYLTQIIILSSVGIIIAGIIEETNLLSIIKKITKPLCLISNLPEECVVALLGNFIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PTVGKSMLAKFYKDNKINNKETIATAIISPLPIILGESIFRVQLPLAIVFLGYKLGIIYV
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LFNMFSGFLMASIGIIYSNIFFERKPININTNNNEKIIFNREVITKGVMKSVELLKKVIP
HHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
MIVIFTLLIYCLMTFGLTDIVKEIFTPLFGILNLPGEAVMVLVANFAHFSAGYATVDILI
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHEEEEEE
KNGALNEKQALLTLLIGNIIGISMIYLKHSIGTYVALFGRFGLKLAMINYTISIIVKILL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLVMLLL
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]