Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is cdhB [H]

Identifier: 150400906

GI number: 150400906

Start: 496477

End: 496989

Strand: Reverse

Name: cdhB [H]

Synonym: Maeo_0474

Alternate gene names: 150400906

Gene position: 496989-496477 (Counterclockwise)

Preceding gene: 150400908

Following gene: 150400905

Centisome position: 31.67

GC content: 32.94

Gene sequence:

>513_bases
ATGTCTGCATGGAATCCTGCATTATCTTCCCCAAATCAGGCAATAATTTGTTCCCCTAAAATAGCTGCACTAACAATAAA
ACAGTCTAAAAATCCCATGTTTGTCATGGGTTCTTTATTAAATGTGATACCCGAAGAGATAGCAGAATATGCAATAAAAA
TAGCAAAATTAAAACACATGACTGTTGTATCAACGGGCGGTTCTAACATTATGCTTTCGAAATTAAATTTTAAACCCCAT
TATAATATTGGGGCTGTGGAGTTAATAAATCATCTAAAAGATTCAAATTGGAATGGTTTTTGCGGTAAGGGAAATTATGA
TTTAATATGTTTTATAGGTGTGCCTTATTATATTGGCTCCCAAGGTCTTTCTACATTAAAAAACTTTGCACCTCACTTAA
AAACCATTACGCTGTGCAAATTTATGCACCCTAATGCTGATTTATCTTATCCAAATATGTCTTATGATGGCTGGGTAATA
TATCTTTCAAAGCTGGTTGAATATATGGAATAA

Upstream 100 bases:

>100_bases
CCGTCAACCCGAAACATACCCTCACCTTTATATAATATCATTATTAATCATTATATATGTGTAATTAATACACACAATAT
ATAAATCTTGTGGTGATATT

Downstream 100 bases:

>100_bases
ATAAATTTCCCTGTTCATTGTATTTTTTCTCTCTCTCTTTTTATTGTATAAAAATATGTTGCCGAATAATTAAAATTATA
ATGATCGTGATAATAAGACA

Product: acetyl-CoA decarbonylase/synthase complex subunit epsilon

Products: CO2; AH2

Alternate protein names: ACDS complex subunit epsilon [H]

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSAWNPALSSPNQAIICSPKIAALTIKQSKNPMFVMGSLLNVIPEEIAEYAIKIAKLKHMTVVSTGGSNIMLSKLNFKPH
YNIGAVELINHLKDSNWNGFCGKGNYDLICFIGVPYYIGSQGLSTLKNFAPHLKTITLCKFMHPNADLSYPNMSYDGWVI
YLSKLVEYME

Sequences:

>Translated_170_residues
MSAWNPALSSPNQAIICSPKIAALTIKQSKNPMFVMGSLLNVIPEEIAEYAIKIAKLKHMTVVSTGGSNIMLSKLNFKPH
YNIGAVELINHLKDSNWNGFCGKGNYDLICFIGVPYYIGSQGLSTLKNFAPHLKTITLCKFMHPNADLSYPNMSYDGWVI
YLSKLVEYME
>Mature_169_residues
SAWNPALSSPNQAIICSPKIAALTIKQSKNPMFVMGSLLNVIPEEIAEYAIKIAKLKHMTVVSTGGSNIMLSKLNFKPHY
NIGAVELINHLKDSNWNGFCGKGNYDLICFIGVPYYIGSQGLSTLKNFAPHLKTITLCKFMHPNADLSYPNMSYDGWVIY
LSKLVEYME

Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). Probably has a structural role in stabilizing the alpha-epsilon subcomponent of the ACDS complex by forming a structural link between the two a

COG id: COG1880

COG function: function code C; CO dehydrogenase/acetyl-CoA synthase epsilon subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdhB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003704 [H]

Pfam domain/function: PF02552 CO_dh [H]

EC number: 1.2.99.2

Molecular weight: Translated: 18908; Mature: 18777

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAWNPALSSPNQAIICSPKIAALTIKQSKNPMFVMGSLLNVIPEEIAEYAIKIAKLKHM
CCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHEE
TVVSTGGSNIMLSKLNFKPHYNIGAVELINHLKDSNWNGFCGKGNYDLICFIGVPYYIGS
EEEECCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCEEEEECCCHHCCC
QGLSTLKNFAPHLKTITLCKFMHPNADLSYPNMSYDGWVIYLSKLVEYME
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure 
SAWNPALSSPNQAIICSPKIAALTIKQSKNPMFVMGSLLNVIPEEIAEYAIKIAKLKHM
CCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHEE
TVVSTGGSNIMLSKLNFKPHYNIGAVELINHLKDSNWNGFCGKGNYDLICFIGVPYYIGS
EEEECCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCEEEEECCCHHCCC
QGLSTLKNFAPHLKTITLCKFMHPNADLSYPNMSYDGWVIYLSKLVEYME
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CO; H2O; A

Specific reaction: CO + H2O + A = CO2 + AH2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]