| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is kch [C]
Identifier: 150400883
GI number: 150400883
Start: 473749
End: 474759
Strand: Direct
Name: kch [C]
Synonym: Maeo_0451
Alternate gene names: 150400883
Gene position: 473749-474759 (Clockwise)
Preceding gene: 150400879
Following gene: 150400884
Centisome position: 30.18
GC content: 31.75
Gene sequence:
>1011_bases ATGGAAGCAATAAAACAAATAAAAATTGGAATTACTGTTATAGGAGTTATTATATTGTTGGCATCATTAGGTTTAATGAG GTATGAAAATTGGGATTTTTTCACTGCTCTATATGTAACAATAATCACAATTACCACGGTTGGATATGGTGATTATGTCC CCCAAACAATTAAAGGAAAACTTATCACGGTTGGATATATAATATTTGGAGCAGGTGCCATGGCATATACTTTTGGGTCT ATTGCAGGGTTTTTTATTGAGGGACGATTTAAAGAAATAATATACTTAAAAAAAATGAAGTCAAGGTTAAAAAAAATGGA AGATCATTATATTATTTGTGGATTTGGTAAAATTGGTAAGGTAGTAGCTAAAAAATTTGAAGATGCAAATGTGCCTTATG TAGTAATTGATTCCGACCAATCAATAATGGAGAGTCCATTAGAGCAATATCCTCATTTATCATATGTAATTGGAGATGCT TCCTCGGATGAGATATTAATAAAAGCAGGTGCGCATAAGGCTAAGGGATTAATAACCGCAGTAAATTCCGATGCAGATAA TGCCTTTATCACCATATCTGCAAAAGAGATAAATCCAAACATATATATTGTTGCAAAAGCTGATAAAGATAGCTCTGTTG ATAAATTAATAAAAGCAGGTGCGGATAGGGCAGTATCTCCATATGACATAGGAGGATTGAGAATCGCAGAACTGTCCCTA AAACCTGAAATTCTTGATTTTGTATCTACTCTTATGGATGCATCACAAGATATGGAAATTGGAAGATATGAAGTATCTCC AAATTCAAAGGTTGTTGGACATTCTCTTTATGAGTGCAAAATAAGACAAACAACTGGAACTACAATTCTTGCCATTAAAA AAATTAAAGAAGATGGCAGTGATGATATTATTATTAATCCAGAGTCCGATGTGATTTTAAAAGAGCATGACATATTATAT GTATTTGGAACAAAAGAACAATTAAGAAAACTTAAAGAAATATTATTATAA
Upstream 100 bases:
>100_bases TATACGATATACACACATAAAGAATAAAATCATTATTGTTATATAATTTATTTTTATATTTTATTATATTTTTATTCTTT ATATTTATTTATGTGATTAA
Downstream 100 bases:
>100_bases AATGAAGATAGTATTTAATAATATATATTATTTAAAATAAAAATATAGAGGAGATATAATGAATAATATAGAATCTACTG AATATATTGAATTAAAAGGA
Product: TrkA domain-containing protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: MjK1 [H]
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MEAIKQIKIGITVIGVIILLASLGLMRYENWDFFTALYVTIITITTVGYGDYVPQTIKGKLITVGYIIFGAGAMAYTFGS IAGFFIEGRFKEIIYLKKMKSRLKKMEDHYIICGFGKIGKVVAKKFEDANVPYVVIDSDQSIMESPLEQYPHLSYVIGDA SSDEILIKAGAHKAKGLITAVNSDADNAFITISAKEINPNIYIVAKADKDSSVDKLIKAGADRAVSPYDIGGLRIAELSL KPEILDFVSTLMDASQDMEIGRYEVSPNSKVVGHSLYECKIRQTTGTTILAIKKIKEDGSDDIIINPESDVILKEHDILY VFGTKEQLRKLKEILL
Sequences:
>Translated_336_residues MEAIKQIKIGITVIGVIILLASLGLMRYENWDFFTALYVTIITITTVGYGDYVPQTIKGKLITVGYIIFGAGAMAYTFGS IAGFFIEGRFKEIIYLKKMKSRLKKMEDHYIICGFGKIGKVVAKKFEDANVPYVVIDSDQSIMESPLEQYPHLSYVIGDA SSDEILIKAGAHKAKGLITAVNSDADNAFITISAKEINPNIYIVAKADKDSSVDKLIKAGADRAVSPYDIGGLRIAELSL KPEILDFVSTLMDASQDMEIGRYEVSPNSKVVGHSLYECKIRQTTGTTILAIKKIKEDGSDDIIINPESDVILKEHDILY VFGTKEQLRKLKEILL >Mature_336_residues MEAIKQIKIGITVIGVIILLASLGLMRYENWDFFTALYVTIITITTVGYGDYVPQTIKGKLITVGYIIFGAGAMAYTFGS IAGFFIEGRFKEIIYLKKMKSRLKKMEDHYIICGFGKIGKVVAKKFEDANVPYVVIDSDQSIMESPLEQYPHLSYVIGDA SSDEILIKAGAHKAKGLITAVNSDADNAFITISAKEINPNIYIVAKADKDSSVDKLIKAGADRAVSPYDIGGLRIAELSL KPEILDFVSTLMDASQDMEIGRYEVSPNSKVVGHSLYECKIRQTTGTTILAIKKIKEDGSDDIIINPESDVILKEHDILY VFGTKEQLRKLKEILL
Specific function: Potassium channel protein. Seems to conduct potassium at low membrane potentials [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=226, Percent_Identity=27.4336283185841, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1786685, Length=118, Percent_Identity=28.8135593220339, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR003280 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 37124; Mature: 37124
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAIKQIKIGITVIGVIILLASLGLMRYENWDFFTALYVTIITITTVGYGDYVPQTIKGK CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHEECCCCCCCCHHHCCC LITVGYIIFGAGAMAYTFGSIAGFFIEGRFKEIIYLKKMKSRLKKMEDHYIICGFGKIGK EEEEEEHHHCCCHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH VVAKKFEDANVPYVVIDSDQSIMESPLEQYPHLSYVIGDASSDEILIKAGAHKAKGLITA HHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCCCEEEE VNSDADNAFITISAKEINPNIYIVAKADKDSSVDKLIKAGADRAVSPYDIGGLRIAELSL ECCCCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEC KPEILDFVSTLMDASQDMEIGRYEVSPNSKVVGHSLYECKIRQTTGTTILAIKKIKEDGS CHHHHHHHHHHHCCCCCCCCCEEEECCCCCEECCCEEEEEEEECCCCEEEEEEEHHCCCC DDIIINPESDVILKEHDILYVFGTKEQLRKLKEILL CCEEECCCCCEEEEECCEEEEECCHHHHHHHHHHHC >Mature Secondary Structure MEAIKQIKIGITVIGVIILLASLGLMRYENWDFFTALYVTIITITTVGYGDYVPQTIKGK CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHEECCCCCCCCHHHCCC LITVGYIIFGAGAMAYTFGSIAGFFIEGRFKEIIYLKKMKSRLKKMEDHYIICGFGKIGK EEEEEEHHHCCCHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH VVAKKFEDANVPYVVIDSDQSIMESPLEQYPHLSYVIGDASSDEILIKAGAHKAKGLITA HHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCCCEEEE VNSDADNAFITISAKEINPNIYIVAKADKDSSVDKLIKAGADRAVSPYDIGGLRIAELSL ECCCCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEC KPEILDFVSTLMDASQDMEIGRYEVSPNSKVVGHSLYECKIRQTTGTTILAIKKIKEDGS CHHHHHHHHHHHCCCCCCCCCEEEECCCCCEECCCEEEEEEEECCCCEEEEEEEHHCCCC DDIIINPESDVILKEHDILYVFGTKEQLRKLKEILL CCEEECCCCCEEEEECCEEEEECCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]