| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400823
Identifier: 150400823
GI number: 150400823
Start: 404534
End: 405964
Strand: Direct
Name: 150400823
Synonym: Maeo_0391
Alternate gene names: NA
Gene position: 404534-405964 (Clockwise)
Preceding gene: 150400822
Following gene: 150400843
Centisome position: 25.77
GC content: 24.88
Gene sequence:
>1431_bases TTGGGTACTATAAAGATAATAGCTAAAAATACAACAATATTGTATATTTCCGAAGTTCTTAGCAAATTTTTAGGATTTTT ATATGTAATGTACATGGCAAGATATTTAGGGGCAGAAGGATATGGGATCATATCTTTTGCCATGGCATTTACAGGAATAT TTGCCATATTTATGGATTTTGGAATAAATCAGCTGAGTATTAGAGATATTTCCAGAGATAAAACAATTACTGAAAAATAC TTAGATAATATACTAATGTTAAAGGTTATAATTGGTATTATTGTATATTTATCAATTATAATCATAATGAAAGTTATAGA TTACAATACTACAACAATATTTGTTGTATATATTATTGCATTAAGTACTTTATTTAATTCATTTAACCAAACTATTTACT CAATATATCAATCTTATGAGAAAATGGAATACATGGGTATCGGAAAAATTTTGAATAGTATTTTAATGTTCTCGGGTGTA TTTTTAGCTGTCTTTTTGAATTTGGATATTGTAAAATTCGCATATATTTACCTAATGGCATCAATAATAAACTTTATATA TTGTATATGTGTATTATCTATTAAGTTTGTAAAACCAAAATTAAGTGTAGATTTGAAATTTTGGAGATGGCTTTTAAAAG AGGCGATACCATTTGGATTGGGCGGGATTTTTATAAGCATATATTTTAATATAGATTCAGTAATGTTATCTGCAATGAAA GGAAATATATATGTCGGATGGTATAATGCACCTTATAAATTAATATTAATTTTATTATCGGTTCCTGCAATATATACTGC ATCAATACTGCCCACAATATCAAAGAATTTTAATAATATTAATAATTTAAAAAAAATATATTCTACATCCTTTAAATTTC TATTTTCAATGTCTTTATTGATATTCGTTGAAATATATTTATTTGCCGGCGATATCATAAATTTTATTTATGGGATAGAT TATAAGCCATCTGTTACGGCACTAAAAATTTTAATATTTGTAATACCTATAATGTATCTTACATATTTATCAGGTAGTTT TCTTAGCGTCACAGGCAAACAAAAATATTTATGCAATGTTGTAATGTTAAATGCAATATTTAATGTCTTGCTGAATTATT TATTAATTCCTCGGTTTGATATTTTGGGTGCATCGCTTGCTACTGTATTAACTGAGTTAATTGGATTATTTTTAATGGTA TATTGTATAATTAAATATTTTTTTAAATTATCTGCTATTGATTTGATGCTAAAGCCATTATTTTGTGGAGGGCTTGTATT TTTAATAAGTTATATGTTAAAAGAGTCTGTTGATTGGATATTTTTAAGTATTTTTGGGAGTTTAGTTTATGGGGTAATGT TAATTGTTGCAGATAAACAGATTAAAAAAATAGTATTTGATTTATATAATGAATTTAAAGCTAAAATTTGA
Upstream 100 bases:
>100_bases TTTAACCCCATCTTTTGTATATAAAATTGTGCGACCCATAGTAAAAGGAATAAAAAATACAAAACATAAAATTTAGAGTA TATTAAAAAAGGGGATACAT
Downstream 100 bases:
>100_bases ATTAATTTGAAAGGAAAATTTGGCTACCTTTATTATCGTAGATTTTGTTTTTACCTCTTAACAGGGGTTTTACATCCGAA AAATTAAAATAATACCATAT
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Lipopolysaccharide O-Side Chain Biosynthesis Protein; Capsular Polysaccharide Biosynthesis Protein; Polysaccharide Biosynthesis Family Protein; MatE Family; Oligosaccharide Translocase; Oligosaccharide Transporter; LPS Biosynthesis Related Polysaccharide Transporter; O-Antigen Transporter Related Protein; Heteropolysaccharide Repeat-Containing Protein; O-Antigen Transporter; O-Antigen Flippase; LPS Biosynthesis Related Flippase; Polysaccharide Biosynthesis Export Protein; O-Antigen And Teichoic Acid Export Protein; Methyltransferase FkbM Family; Lipopolysaccharide Biosynthesis Protein; Polysaccharide Biosynthesis Related Protein; Lipopolysaccharide/O-Antigen Transporter; Polisoprenol-Linked O-Antigen Transporter; Flippase Wzx
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MGTIKIIAKNTTILYISEVLSKFLGFLYVMYMARYLGAEGYGIISFAMAFTGIFAIFMDFGINQLSIRDISRDKTITEKY LDNILMLKVIIGIIVYLSIIIIMKVIDYNTTTIFVVYIIALSTLFNSFNQTIYSIYQSYEKMEYMGIGKILNSILMFSGV FLAVFLNLDIVKFAYIYLMASIINFIYCICVLSIKFVKPKLSVDLKFWRWLLKEAIPFGLGGIFISIYFNIDSVMLSAMK GNIYVGWYNAPYKLILILLSVPAIYTASILPTISKNFNNINNLKKIYSTSFKFLFSMSLLIFVEIYLFAGDIINFIYGID YKPSVTALKILIFVIPIMYLTYLSGSFLSVTGKQKYLCNVVMLNAIFNVLLNYLLIPRFDILGASLATVLTELIGLFLMV YCIIKYFFKLSAIDLMLKPLFCGGLVFLISYMLKESVDWIFLSIFGSLVYGVMLIVADKQIKKIVFDLYNEFKAKI
Sequences:
>Translated_476_residues MGTIKIIAKNTTILYISEVLSKFLGFLYVMYMARYLGAEGYGIISFAMAFTGIFAIFMDFGINQLSIRDISRDKTITEKY LDNILMLKVIIGIIVYLSIIIIMKVIDYNTTTIFVVYIIALSTLFNSFNQTIYSIYQSYEKMEYMGIGKILNSILMFSGV FLAVFLNLDIVKFAYIYLMASIINFIYCICVLSIKFVKPKLSVDLKFWRWLLKEAIPFGLGGIFISIYFNIDSVMLSAMK GNIYVGWYNAPYKLILILLSVPAIYTASILPTISKNFNNINNLKKIYSTSFKFLFSMSLLIFVEIYLFAGDIINFIYGID YKPSVTALKILIFVIPIMYLTYLSGSFLSVTGKQKYLCNVVMLNAIFNVLLNYLLIPRFDILGASLATVLTELIGLFLMV YCIIKYFFKLSAIDLMLKPLFCGGLVFLISYMLKESVDWIFLSIFGSLVYGVMLIVADKQIKKIVFDLYNEFKAKI >Mature_475_residues GTIKIIAKNTTILYISEVLSKFLGFLYVMYMARYLGAEGYGIISFAMAFTGIFAIFMDFGINQLSIRDISRDKTITEKYL DNILMLKVIIGIIVYLSIIIIMKVIDYNTTTIFVVYIIALSTLFNSFNQTIYSIYQSYEKMEYMGIGKILNSILMFSGVF LAVFLNLDIVKFAYIYLMASIINFIYCICVLSIKFVKPKLSVDLKFWRWLLKEAIPFGLGGIFISIYFNIDSVMLSAMKG NIYVGWYNAPYKLILILLSVPAIYTASILPTISKNFNNINNLKKIYSTSFKFLFSMSLLIFVEIYLFAGDIINFIYGIDY KPSVTALKILIFVIPIMYLTYLSGSFLSVTGKQKYLCNVVMLNAIFNVLLNYLLIPRFDILGASLATVLTELIGLFLMVY CIIKYFFKLSAIDLMLKPLFCGGLVFLISYMLKESVDWIFLSIFGSLVYGVMLIVADKQIKKIVFDLYNEFKAKI
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54410; Mature: 54279
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTIKIIAKNTTILYISEVLSKFLGFLYVMYMARYLGAEGYGIISFAMAFTGIFAIFMDF CCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC GINQLSIRDISRDKTITEKYLDNILMLKVIIGIIVYLSIIIIMKVIDYNTTTIFVVYIIA CCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LSTLFNSFNQTIYSIYQSYEKMEYMGIGKILNSILMFSGVFLAVFLNLDIVKFAYIYLMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIINFIYCICVLSIKFVKPKLSVDLKFWRWLLKEAIPFGLGGIFISIYFNIDSVMLSAMK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC GNIYVGWYNAPYKLILILLSVPAIYTASILPTISKNFNNINNLKKIYSTSFKFLFSMSLL CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH IFVEIYLFAGDIINFIYGIDYKPSVTALKILIFVIPIMYLTYLSGSFLSVTGKQKYLCNV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH VMLNAIFNVLLNYLLIPRFDILGASLATVLTELIGLFLMVYCIIKYFFKLSAIDLMLKPL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCGGLVFLISYMLKESVDWIFLSIFGSLVYGVMLIVADKQIKKIVFDLYNEFKAKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GTIKIIAKNTTILYISEVLSKFLGFLYVMYMARYLGAEGYGIISFAMAFTGIFAIFMDF CCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC GINQLSIRDISRDKTITEKYLDNILMLKVIIGIIVYLSIIIIMKVIDYNTTTIFVVYIIA CCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LSTLFNSFNQTIYSIYQSYEKMEYMGIGKILNSILMFSGVFLAVFLNLDIVKFAYIYLMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIINFIYCICVLSIKFVKPKLSVDLKFWRWLLKEAIPFGLGGIFISIYFNIDSVMLSAMK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC GNIYVGWYNAPYKLILILLSVPAIYTASILPTISKNFNNINNLKKIYSTSFKFLFSMSLL CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH IFVEIYLFAGDIINFIYGIDYKPSVTALKILIFVIPIMYLTYLSGSFLSVTGKQKYLCNV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH VMLNAIFNVLLNYLLIPRFDILGASLATVLTELIGLFLMVYCIIKYFFKLSAIDLMLKPL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCGGLVFLISYMLKESVDWIFLSIFGSLVYGVMLIVADKQIKKIVFDLYNEFKAKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA