| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400789
Identifier: 150400789
GI number: 150400789
Start: 377442
End: 378092
Strand: Direct
Name: 150400789
Synonym: Maeo_0356
Alternate gene names: NA
Gene position: 377442-378092 (Clockwise)
Preceding gene: 150400786
Following gene: 150400790
Centisome position: 24.05
GC content: 27.65
Gene sequence:
>651_bases ATGTATGAAAAACTCGATGTTATTGAACATGCCATTTTATTAAATCCAGAATATATAAAAATATTCCGAACAAAATTAAA AATAACCCAATCAAAACTTGCGGAAGAAAGTGGCGTTAGTCAATCGCATTTAAGTATGCTTGAAAAAGGAAAGAGAGAAG CCACAAAATCTAATGCTGCCGCCATAACGCTGGGATTATTAAAATGTAGTAATATTTGGGAAAATGAAGACCCAATATTA TATTTATTGGATATTCTATCACTAACAAAATTTGAATCCACAATAATTAATTTTATTATAGGGCTTGTTGGTGATGGCAA AAATAATAAAAACAATAGATTTTATAAATTAATTGACGGTTATCCTGTTGTAATTATTGACAAATATTATTTTACCGAAT ATATGAAAAAAAACTTAAAGGTAATAGATATATTAAGTATTGAGTTTCAAAGGGGGAAAATTAAAGGAAAGGGACAATAT TCTGATAGCAAACAGGCAGATATATCATTAGATTGTTCAGAAATAAGGCGACTGGAAACAAAAATATCAAATAGTATTGG TAAGAAGATAATTATACAGATATTTCCAAAAGAGGAAATTCCTCCTATTTATTCAATTAAAAAGGATAGTATTATAATTC ATTGTTGGTGA
Upstream 100 bases:
>100_bases AACTATATATATTATATCCACTATGAATAATATTATTCCTATGTGATACTTAATTATTAATCATTATATATGACGGAAGT TATATTCCTGTTGTGGTAAT
Downstream 100 bases:
>100_bases CGGTGATATTGTGGGCGATATTATGGGAGCTCCACTATTTAATAATTTAATTTATTATGGTGGGGCCATTATTGTATCAA TAATTATTGGTTTATTGTTA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MYEKLDVIEHAILLNPEYIKIFRTKLKITQSKLAEESGVSQSHLSMLEKGKREATKSNAAAITLGLLKCSNIWENEDPIL YLLDILSLTKFESTIINFIIGLVGDGKNNKNNRFYKLIDGYPVVIIDKYYFTEYMKKNLKVIDILSIEFQRGKIKGKGQY SDSKQADISLDCSEIRRLETKISNSIGKKIIIQIFPKEEIPPIYSIKKDSIIIHCW
Sequences:
>Translated_216_residues MYEKLDVIEHAILLNPEYIKIFRTKLKITQSKLAEESGVSQSHLSMLEKGKREATKSNAAAITLGLLKCSNIWENEDPIL YLLDILSLTKFESTIINFIIGLVGDGKNNKNNRFYKLIDGYPVVIIDKYYFTEYMKKNLKVIDILSIEFQRGKIKGKGQY SDSKQADISLDCSEIRRLETKISNSIGKKIIIQIFPKEEIPPIYSIKKDSIIIHCW >Mature_216_residues MYEKLDVIEHAILLNPEYIKIFRTKLKITQSKLAEESGVSQSHLSMLEKGKREATKSNAAAITLGLLKCSNIWENEDPIL YLLDILSLTKFESTIINFIIGLVGDGKNNKNNRFYKLIDGYPVVIIDKYYFTEYMKKNLKVIDILSIEFQRGKIKGKGQY SDSKQADISLDCSEIRRLETKISNSIGKKIIIQIFPKEEIPPIYSIKKDSIIIHCW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 24823; Mature: 24823
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEKLDVIEHAILLNPEYIKIFRTKLKITQSKLAEESGVSQSHLSMLEKGKREATKSNAA CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC AITLGLLKCSNIWENEDPILYLLDILSLTKFESTIINFIIGLVGDGKNNKNNRFYKLIDG EEEEEHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC YPVVIIDKYYFTEYMKKNLKVIDILSIEFQRGKIKGKGQYSDSKQADISLDCSEIRRLET CEEEEEEHHHHHHHHHCCCEEEEEEEEEEECCEECCCCCCCCCCCCCEEECHHHHHHHHH KISNSIGKKIIIQIFPKEEIPPIYSIKKDSIIIHCW HHHHHCCCEEEEEEECCCCCCCCEEECCCCEEEEEC >Mature Secondary Structure MYEKLDVIEHAILLNPEYIKIFRTKLKITQSKLAEESGVSQSHLSMLEKGKREATKSNAA CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC AITLGLLKCSNIWENEDPILYLLDILSLTKFESTIINFIIGLVGDGKNNKNNRFYKLIDG EEEEEHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC YPVVIIDKYYFTEYMKKNLKVIDILSIEFQRGKIKGKGQYSDSKQADISLDCSEIRRLET CEEEEEEHHHHHHHHHCCCEEEEEEEEEEECCEECCCCCCCCCCCCCEEECHHHHHHHHH KISNSIGKKIIIQIFPKEEIPPIYSIKKDSIIIHCW HHHHHCCCEEEEEEECCCCCCCCEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]